Click here to switch to the map view.

The map label for this gene is ybeZ [C]

Identifier: 220918004

GI number: 220918004

Start: 3216378

End: 3217457

Strand: Reverse

Name: ybeZ [C]

Synonym: A2cp1_2905

Alternate gene names: 220918004

Gene position: 3217457-3216378 (Counterclockwise)

Preceding gene: 220918005

Following gene: 220918003

Centisome position: 63.97

GC content: 70.93

Gene sequence:

>1080_bases
TTGGGTCAAAGCGCGGCGGAACCCCTCAAGACGGCCAGGCTCGAGTTTCCCGACAACGACAAGGTCCGCGCCCTGTGCGG
CGCGCACAACGAGCACCTCAAGCTCGTGGAGCGCCGGCTCGGGGTCCAGCTCGGGCTGCGCGGCGGCCAGGTGGTGATCG
CCGCGCCCGAGGAGGCGCGGGTGCACCTGGCCGAGTCGCTGGTGAAGGAGCTCTACGAGCTCGTCGAGGCGGGGTATCCG
CTGTACCTCGAGGACGTCGACCAGGCGACGAAGCTCGCGGTTCAGGGCGTCCCGCTGAAGGAGATCTTCGGCGACACGGT
CTTCGTCTCCTCGCGCCACCGCATCATCACGCCCAAGGGGCTCGCGCAGAAGCGCTACATCCAGGCCATCCGCGACGACG
ACATCGTGTTCGGGGTGGGGCCGGCCGGCACCGGCAAGACGTACCTCGCCATGGCGATGGCGGTGGCGTACCTGGTCGAG
CGGCGGGTGAAGCGGATCGTGCTGACGCGGCCCGCGGTGGAGGCCGGCGAGCGGCTCGGGTTCCTGCCCGGCGACATCGC
CGAGAAGGTGAACCCGTACCTGCGGCCGCTGCACGACGCGCTGTTCGACATGGTGGACTACGAGAAGGCGACCGCCTTCA
TCGAGCGCGGCACCGTGGAGGTGGCGCCGCTCGCGTTCATGCGCGGCCGCACGCTGAACGACGCGTTCATCATCCTCGAC
GAGGCCCAGAACACCACCGCCGAGCAGATGAAGATGTTCCTGACACGCCTCGGCTACGGCTCGAAGGCGGTCATCACCGG
CGACGTGACGCAGGTGGACCTGCCGAGCGGCCGCGGCTCCGGCCTGGTGGAGGTGCAGAAGGTCCTCCGCGGCGTGGAGG
GCGTCTCGTTCTGCATGTTCTCCGAGGTCGACGTGGTCCGGCACCCGCTGGTCCAGGAGGTGGTGCGGGCCTACGACGCC
TTCGAGGCGGAGCGGCGCGCCCGCACCGAGTCCGCCCGGACGGAGAAGGGCCGGCCGGGCGGGGGCACGGACGCCGGGGG
GACCGACGCCGGGGGAGGGGAGCCCGGCGCGGAAGGGTAG

Upstream 100 bases:

>100_bases
CCTCCGCTGCCGCGCGACGGGGCGTAGATTATGGGTGCCCCCGCGGGGCGAGCGCCGTCCAGGCGGACGGCGGCACGGAC
AACCGACGTAAGGAGCATCC

Downstream 100 bases:

>100_bases
CCCCGGAAGCGTCCGCCATCGATCCGCGGAGGGGCGGCACCTCGCCGCGTGTTCAGGGGGAAGCCCCGGTTCTCCGTTGC
GCTCCTCCCACCCCGGTGCG

Product: PhoH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MGQSAAEPLKTARLEFPDNDKVRALCGAHNEHLKLVERRLGVQLGLRGGQVVIAAPEEARVHLAESLVKELYELVEAGYP
LYLEDVDQATKLAVQGVPLKEIFGDTVFVSSRHRIITPKGLAQKRYIQAIRDDDIVFGVGPAGTGKTYLAMAMAVAYLVE
RRVKRIVLTRPAVEAGERLGFLPGDIAEKVNPYLRPLHDALFDMVDYEKATAFIERGTVEVAPLAFMRGRTLNDAFIILD
EAQNTTAEQMKMFLTRLGYGSKAVITGDVTQVDLPSGRGSGLVEVQKVLRGVEGVSFCMFSEVDVVRHPLVQEVVRAYDA
FEAERRARTESARTEKGRPGGGTDAGGTDAGGGEPGAEG

Sequences:

>Translated_359_residues
MGQSAAEPLKTARLEFPDNDKVRALCGAHNEHLKLVERRLGVQLGLRGGQVVIAAPEEARVHLAESLVKELYELVEAGYP
LYLEDVDQATKLAVQGVPLKEIFGDTVFVSSRHRIITPKGLAQKRYIQAIRDDDIVFGVGPAGTGKTYLAMAMAVAYLVE
RRVKRIVLTRPAVEAGERLGFLPGDIAEKVNPYLRPLHDALFDMVDYEKATAFIERGTVEVAPLAFMRGRTLNDAFIILD
EAQNTTAEQMKMFLTRLGYGSKAVITGDVTQVDLPSGRGSGLVEVQKVLRGVEGVSFCMFSEVDVVRHPLVQEVVRAYDA
FEAERRARTESARTEKGRPGGGTDAGGTDAGGGEPGAEG
>Mature_358_residues
GQSAAEPLKTARLEFPDNDKVRALCGAHNEHLKLVERRLGVQLGLRGGQVVIAAPEEARVHLAESLVKELYELVEAGYPL
YLEDVDQATKLAVQGVPLKEIFGDTVFVSSRHRIITPKGLAQKRYIQAIRDDDIVFGVGPAGTGKTYLAMAMAVAYLVER
RVKRIVLTRPAVEAGERLGFLPGDIAEKVNPYLRPLHDALFDMVDYEKATAFIERGTVEVAPLAFMRGRTLNDAFIILDE
AQNTTAEQMKMFLTRLGYGSKAVITGDVTQVDLPSGRGSGLVEVQKVLRGVEGVSFCMFSEVDVVRHPLVQEVVRAYDAF
EAERRARTESARTEKGRPGGGTDAGGTDAGGGEPGAEG

Specific function: Unknown

COG id: COG1702

COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phoH family [H]

Homologues:

Organism=Escherichia coli, GI145693103, Length=333, Percent_Identity=48.948948948949, Blast_Score=295, Evalue=3e-81,
Organism=Escherichia coli, GI1787257, Length=205, Percent_Identity=45.8536585365854, Blast_Score=183, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004087
- InterPro:   IPR003714 [H]

Pfam domain/function: PF02562 PhoH [H]

EC number: NA

Molecular weight: Translated: 39006; Mature: 38875

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQSAAEPLKTARLEFPDNDKVRALCGAHNEHLKLVERRLGVQLGLRGGQVVIAAPEEAR
CCCCHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHCHHEECCCCEEEEECCHHHH
VHLAESLVKELYELVEAGYPLYLEDVDQATKLAVQGVPLKEIFGDTVFVSSRHRIITPKG
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHCCEEEEECCCEEECCCC
LAQKRYIQAIRDDDIVFGVGPAGTGKTYLAMAMAVAYLVERRVKRIVLTRPAVEAGERLG
HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
FLPGDIAEKVNPYLRPLHDALFDMVDYEKATAFIERGTVEVAPLAFMRGRTLNDAFIILD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCCCCCEEEEEE
EAQNTTAEQMKMFLTRLGYGSKAVITGDVTQVDLPSGRGSGLVEVQKVLRGVEGVSFCMF
CCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHH
SEVDVVRHPLVQEVVRAYDAFEAERRARTESARTEKGRPGGGTDAGGTDAGGGEPGAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GQSAAEPLKTARLEFPDNDKVRALCGAHNEHLKLVERRLGVQLGLRGGQVVIAAPEEAR
CCCHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHHHHCHHEECCCCEEEEECCHHHH
VHLAESLVKELYELVEAGYPLYLEDVDQATKLAVQGVPLKEIFGDTVFVSSRHRIITPKG
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHCCEEEEECCCEEECCCC
LAQKRYIQAIRDDDIVFGVGPAGTGKTYLAMAMAVAYLVERRVKRIVLTRPAVEAGERLG
HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
FLPGDIAEKVNPYLRPLHDALFDMVDYEKATAFIERGTVEVAPLAFMRGRTLNDAFIILD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHCCCCCCCEEEEEE
EAQNTTAEQMKMFLTRLGYGSKAVITGDVTQVDLPSGRGSGLVEVQKVLRGVEGVSFCMF
CCCCCHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCHHHHHH
SEVDVVRHPLVQEVVRAYDAFEAERRARTESARTEKGRPGGGTDAGGTDAGGGEPGAEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]