Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918005
Identifier: 220918005
GI number: 220918005
Start: 3217569
End: 3218765
Strand: Reverse
Name: 220918005
Synonym: A2cp1_2906
Alternate gene names: NA
Gene position: 3218765-3217569 (Counterclockwise)
Preceding gene: 220918006
Following gene: 220918004
Centisome position: 64.0
GC content: 73.52
Gene sequence:
>1197_bases ATGGCGCTCACCGGCACGCTCAAGGACTTCGGGATCGCCGAGATCCTCCAGCTCATCGGCCAGCAGGCCAAGAGCGGCGT GCTCCACCTCGAGTCCCGCGACGACGAGATCCACATCGCGCTCGCCGACGGGAACGTGGTCCGGGCCGAGTCGGCCGGGC GCAAGGCGCGCGAGCGGCTCGGCAACATGCTGGTGCGCGCCGAGGTCATCTCCAAGGAGGAGCTGGAGCAGGGCCTGGAG GTCCAGAAGCGCACGCTGCGACGCCTGGGAGACATCCTGGTGGAGCTGGGCTTCGTCTCGCAGCAGGACCTGCGCGAGAT GACGGCGCTGCAGACCACCGAGACCGTCTACCAGCTGTTCCGCTGGAAGAGCGGCACCTACGCGTTCGAGCCGGGCGAGG TGGAGTGGGATCGCGAGACCGTCTCGCCGCTGCGCGCCGAGTCGGTGCTGATGGAGGGGTTCCGCCGGGTGGACGAGTGG CCGATGATCCGCAAGCGGATCCCGTCCACGGCCATGACGTTCGAGCGCCGCCGGGCGCTCGACCCGGACGCGCCCGCCGC GCCGAGGCGCGGCGGCGACGACGTGGACGACGCGTTCGACGCGCTCGGAGAGGAGCCCACCGAGCGCCGCGGCGAGTTCG CCTCGCTCGGTGCGAACGAGCGGCGGGTGTTCGCGCTCGCCATCCCGGGCCGCACCGTCGAGCGGCTCGTGGATCTCTCG CGCCTGGGCGAGTTCGAGACCTGCAAGGCGCTCACGAACCTGCTCAACCTCGGCTACCTCGAGGCGGTCGCCCCCGCCAG CCGGGCCAAGGCGGCGGTCGGCGCCTACGCGCAGGACTGGCAGGCCCGGCTCCGGGCCGGCGCGCTGAGCGTGCTGGCCA CGGTCGCGATCGCGGCGGCGCTGGCCGGGATCGCGTACTGGGTGGACGAGCGCGGCCTGGCGTGGGGCGAGCCCGCCGGC GCGGCGCGCGTGCGGGACAACGCCGCGGAGCGGTTCCTCGCGCGCTACCAGCTCGAGCGGCTGCGCGGCGCGCTGGAGGT GTACCGCCTCGAGAAGGGTGAGTACCCGGCGGCGCTCGGGACGCTGGTCGAGGCCGGCCTGGTGGACGCGCGCGACCTGC GCCACCCGTGGGCGGAGCCCTACCACTACCGGCGCACGCAAGCGGGGCGCTTCGTGCTCCTGCCTCCCGTGGAGTAG
Upstream 100 bases:
>100_bases CTACGTGCTCGCGGGCAAGCTCGCCGTCGCCGTTCCCCTGGGCGTGATCGCCTGGACGCTCGCGGTGCGCGACGCGTTCC GCCGGACCCGGAGCTGACCG
Downstream 100 bases:
>100_bases GGCGCGCCCATCCTCCGCTGCCGCGCGACGGGGCGTAGATTATGGGTGCCCCCGCGGGGCGAGCGCCGTCCAGGCGGACG GCGGCACGGACAACCGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MALTGTLKDFGIAEILQLIGQQAKSGVLHLESRDDEIHIALADGNVVRAESAGRKARERLGNMLVRAEVISKEELEQGLE VQKRTLRRLGDILVELGFVSQQDLREMTALQTTETVYQLFRWKSGTYAFEPGEVEWDRETVSPLRAESVLMEGFRRVDEW PMIRKRIPSTAMTFERRRALDPDAPAAPRRGGDDVDDAFDALGEEPTERRGEFASLGANERRVFALAIPGRTVERLVDLS RLGEFETCKALTNLLNLGYLEAVAPASRAKAAVGAYAQDWQARLRAGALSVLATVAIAAALAGIAYWVDERGLAWGEPAG AARVRDNAAERFLARYQLERLRGALEVYRLEKGEYPAALGTLVEAGLVDARDLRHPWAEPYHYRRTQAGRFVLLPPVE
Sequences:
>Translated_398_residues MALTGTLKDFGIAEILQLIGQQAKSGVLHLESRDDEIHIALADGNVVRAESAGRKARERLGNMLVRAEVISKEELEQGLE VQKRTLRRLGDILVELGFVSQQDLREMTALQTTETVYQLFRWKSGTYAFEPGEVEWDRETVSPLRAESVLMEGFRRVDEW PMIRKRIPSTAMTFERRRALDPDAPAAPRRGGDDVDDAFDALGEEPTERRGEFASLGANERRVFALAIPGRTVERLVDLS RLGEFETCKALTNLLNLGYLEAVAPASRAKAAVGAYAQDWQARLRAGALSVLATVAIAAALAGIAYWVDERGLAWGEPAG AARVRDNAAERFLARYQLERLRGALEVYRLEKGEYPAALGTLVEAGLVDARDLRHPWAEPYHYRRTQAGRFVLLPPVE >Mature_397_residues ALTGTLKDFGIAEILQLIGQQAKSGVLHLESRDDEIHIALADGNVVRAESAGRKARERLGNMLVRAEVISKEELEQGLEV QKRTLRRLGDILVELGFVSQQDLREMTALQTTETVYQLFRWKSGTYAFEPGEVEWDRETVSPLRAESVLMEGFRRVDEWP MIRKRIPSTAMTFERRRALDPDAPAAPRRGGDDVDDAFDALGEEPTERRGEFASLGANERRVFALAIPGRTVERLVDLSR LGEFETCKALTNLLNLGYLEAVAPASRAKAAVGAYAQDWQARLRAGALSVLATVAIAAALAGIAYWVDERGLAWGEPAGA ARVRDNAAERFLARYQLERLRGALEVYRLEKGEYPAALGTLVEAGLVDARDLRHPWAEPYHYRRTQAGRFVLLPPVE
Specific function: Unknown
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44278; Mature: 44147
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTGTLKDFGIAEILQLIGQQAKSGVLHLESRDDEIHIALADGNVVRAESAGRKARERL CCCCCCCHHCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCEEECHHHHHHHHHHH GNMLVRAEVISKEELEQGLEVQKRTLRRLGDILVELGFVSQQDLREMTALQTTETVYQLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RWKSGTYAFEPGEVEWDRETVSPLRAESVLMEGFRRVDEWPMIRKRIPSTAMTFERRRAL HCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCC DPDAPAAPRRGGDDVDDAFDALGEEPTERRGEFASLGANERRVFALAIPGRTVERLVDLS CCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCHHHCCCCCCEEEEEECCCHHHHHHHHHH RLGEFETCKALTNLLNLGYLEAVAPASRAKAAVGAYAQDWQARLRAGALSVLATVAIAAA HCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGIAYWVDERGLAWGEPAGAARVRDNAAERFLARYQLERLRGALEVYRLEKGEYPAALG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TLVEAGLVDARDLRHPWAEPYHYRRTQAGRFVLLPPVE HHHHHCCCCHHHHCCCCCCCHHHHHCCCCCEEECCCCC >Mature Secondary Structure ALTGTLKDFGIAEILQLIGQQAKSGVLHLESRDDEIHIALADGNVVRAESAGRKARERL CCCCCCHHCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEEECCCEEECHHHHHHHHHHH GNMLVRAEVISKEELEQGLEVQKRTLRRLGDILVELGFVSQQDLREMTALQTTETVYQLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH RWKSGTYAFEPGEVEWDRETVSPLRAESVLMEGFRRVDEWPMIRKRIPSTAMTFERRRAL HCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHCC DPDAPAAPRRGGDDVDDAFDALGEEPTERRGEFASLGANERRVFALAIPGRTVERLVDLS CCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCHHHCCCCCCEEEEEECCCHHHHHHHHHH RLGEFETCKALTNLLNLGYLEAVAPASRAKAAVGAYAQDWQARLRAGALSVLATVAIAAA HCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGIAYWVDERGLAWGEPAGAARVRDNAAERFLARYQLERLRGALEVYRLEKGEYPAALG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH TLVEAGLVDARDLRHPWAEPYHYRRTQAGRFVLLPPVE HHHHHCCCCHHHHCCCCCCCHHHHHCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA