Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
---|---|
Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is yqfF [H]
Identifier: 220918003
GI number: 220918003
Start: 3213937
End: 3216186
Strand: Reverse
Name: yqfF [H]
Synonym: A2cp1_2904
Alternate gene names: 220918003
Gene position: 3216186-3213937 (Counterclockwise)
Preceding gene: 220918004
Following gene: 220918002
Centisome position: 63.95
GC content: 76.44
Gene sequence:
>2250_bases ATGCGCGCGCTGCTCGTCGCCGCGGTCGCCGCGGCGGCCGGCTGGCTGCTCGCCCCGTCGGCCGCGCACCGGCTCCCCGG CCCGGACGCGCTCGGTACGCCCGCCCCCGCGACCATCAAGGCCGATCGCGACTACGACATCGTGGACGAGGAGGCGACCG CCCGGCGCCGCGCCGAGACCGCCGCGGCGGAGCGCCCGGTCTACCACCAGGACGCGGGGGCCGCCGACGAGGCGGTCGCG CGGGTGCACGCCGCCTTCGAGCTGATGCGCGACGAGGAGCGGGCGCTGCGGGAGGACGGCCGCGGCCCGCGGGAGGCGGC CGTCCTGGAGCGGCGCTACGCCGCGCAGCGCGCCGCGTTCGTCGCGCGGCTCCAGGTGCTCGTGCGCGACGGCGATCTGG CCGCCCTCGGCACGACCCGGTTCACCGAGGCGGTGGAGCGCCAGCTCGCCGAGCTGGCGCGGGGCGCGCTGGCCGGGATG GTGATCGAGGACCGCAAGCTCCTCCCGGCCGCCCCCGACGCCGGCTTCGTGGTCCGCACCTTCCGCGGCGGCCGCCCGGA GGGCGAGCAGCCGTTCGCGGACGCCGCCCAGGTCCGCGACGTGGCCGAGGCGCGCGAGGAGGTGGCCCGCACCGCGGCCG CGCGGCTGGAGAAGGAGCCCGCGGCGGTGCGCGCGGCGCTGGCGCGCACCGCGGAGGCGATGGTGCGCCCGACGCTGGTC TACGACCAGGCCGAGACCGAGCGCCGGCGCTACGACGCGGCCGCGCGGGTGAAGCCGGTGGCCATCCCGGTGAAGCGCGG CGAGAAGATCATCGGGGACGGCGAGCGGATCGAGAAGCGCCACCTGCTGGTGTTCGACGGCATCCGCGCGCAGCGCAAGG GCGAGGACCTGGGCAGCGTCCGGGCGGGCGGCGCCGCCGTGGTGGCGCTGCTCGTGTCGCTGCTCTGGCGCTTCGCGCGC CGGAACGTGGCGCGCTTCCGGCCGGCGCGCCGCGACGCGCTGCTGCTCTCGCTCCTGTACCTGGGCTCGCTGGCGGCGGG CTTCCTGGGCTTCGCGGTGATGGACGCGCTCCACGAGCGCTTCCCCTACGTCCCTGCCGCCGCGCTGCAGTACCTGGTGC CGTTCGCGGCGGGCGCGATGATCGTCCGGCAGGTGCTGGCGGCGGAGACCGCGCTCCTGTTCGCGCTGGCCATGGGGCTC GCGGCCGGGCTGCTCGCCGGGCAGTCGCTCGCCTTCGCGCTGTTCGCGACGCTCACCTCGGTCGCGGCGGCGGGCCTGGT GCGCAACAACCGCGATCGGGCCGGGCTGTTCCGCGCCGGCCTGGGGGTGGGGCTGGTCGGCGCCGCGGTGGTCGCGGCGC TCGGGCTCTACGCCGGCCGCGCCGGCGCCGAGGTGCTGCTCTCGGCCGTCGGGGCGCTGGTGGGCGGCGCGGTGCTGCTG CCGGTCGCGGTGGTGGGGCTGCTGCCGGTGGTGGAGGGCGTCTTCGGCTACGTCACCGACGTGAAGCTGCTCGAGCTCGC CAACCTGAACCACCCGGCGCTGAAGGAGCTCATCGTCCAGTCGCCCGGCACGTACCACCACTCCATCCTTATGGGCTCGC TGGTGGAGGCCGGGGCGCAGGCGATCGGCGCGAACCCGCTGCTGGCGCGGGTGTGCGCCTACTACCACGACCTCGGGAAG ATCCGGAACCCGCTCTACTTCGCGGAGAACCAGCGCGGGGGCGAGAACCGCCACGACGCGCTCGCGCCCTCCATGAGCGC GCTGATCGTGAAGCGCCACGTGACCGACGGCCTGGAGCTGGCGCGGCACTGGCGCCTGCCGCGGGTGGTCCAGGACGCCA TCGCGCAGCACCACGGGACGCGGCACGTCGGCTACTTCTGGGGAAAGGCGCAGCGCCTGGCCGAGGAGGGCGGGGGCCGT GGCGCGCTCGACGAGGCCCTGTTCCGCTACCCCGGCCCGAGGCCGCAGACGCGCGAGGCGGCGCTCGTCATGATCGCCGA CGCGTGCGAGGCCTCGGCGCGCGCGCTGGAGGACCCCACCGCCGACTCGCTCCGCGCGCTGGTCGCCAAGCGGATCAACG AGGTGTTCGGGGAGGGGCAGCTCGACGAGTGCGCGCTGACGCTGCGCGACCTGAACGCCATCTCCGGCGCGATGGTGCGG GCGCTCGAGGCCATCTACCACACGCGCCCCGAGTACCCGGACCGGCGCCGCGACGAGGGGCCGGCGGTGCACCTGGTGGC CAAGCCGTGA
Upstream 100 bases:
>100_bases CCCGGTGCGACTCTCGCACGCCGTGTCCGGTCCCCCCTCTGACACACCCGCCGCCGGCGGCCCTCCCGCCGCCGACCGCG TCGACTGGCCCGGCCGGCTG
Downstream 100 bases:
>100_bases TCGTCCGCCTGACCTCCGAGCACCGCGACGGCGCCCGCGCCGCCCGGCGCCTCCGCGCTCGCGCGGCCGCGTTCCTCGCC GCCCTGGGGCGCGACGATGC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 749; Mature: 749
Protein sequence:
>749_residues MRALLVAAVAAAAGWLLAPSAAHRLPGPDALGTPAPATIKADRDYDIVDEEATARRRAETAAAERPVYHQDAGAADEAVA RVHAAFELMRDEERALREDGRGPREAAVLERRYAAQRAAFVARLQVLVRDGDLAALGTTRFTEAVERQLAELARGALAGM VIEDRKLLPAAPDAGFVVRTFRGGRPEGEQPFADAAQVRDVAEAREEVARTAAARLEKEPAAVRAALARTAEAMVRPTLV YDQAETERRRYDAAARVKPVAIPVKRGEKIIGDGERIEKRHLLVFDGIRAQRKGEDLGSVRAGGAAVVALLVSLLWRFAR RNVARFRPARRDALLLSLLYLGSLAAGFLGFAVMDALHERFPYVPAAALQYLVPFAAGAMIVRQVLAAETALLFALAMGL AAGLLAGQSLAFALFATLTSVAAAGLVRNNRDRAGLFRAGLGVGLVGAAVVAALGLYAGRAGAEVLLSAVGALVGGAVLL PVAVVGLLPVVEGVFGYVTDVKLLELANLNHPALKELIVQSPGTYHHSILMGSLVEAGAQAIGANPLLARVCAYYHDLGK IRNPLYFAENQRGGENRHDALAPSMSALIVKRHVTDGLELARHWRLPRVVQDAIAQHHGTRHVGYFWGKAQRLAEEGGGR GALDEALFRYPGPRPQTREAALVMIADACEASARALEDPTADSLRALVAKRINEVFGEGQLDECALTLRDLNAISGAMVR ALEAIYHTRPEYPDRRRDEGPAVHLVAKP
Sequences:
>Translated_749_residues MRALLVAAVAAAAGWLLAPSAAHRLPGPDALGTPAPATIKADRDYDIVDEEATARRRAETAAAERPVYHQDAGAADEAVA RVHAAFELMRDEERALREDGRGPREAAVLERRYAAQRAAFVARLQVLVRDGDLAALGTTRFTEAVERQLAELARGALAGM VIEDRKLLPAAPDAGFVVRTFRGGRPEGEQPFADAAQVRDVAEAREEVARTAAARLEKEPAAVRAALARTAEAMVRPTLV YDQAETERRRYDAAARVKPVAIPVKRGEKIIGDGERIEKRHLLVFDGIRAQRKGEDLGSVRAGGAAVVALLVSLLWRFAR RNVARFRPARRDALLLSLLYLGSLAAGFLGFAVMDALHERFPYVPAAALQYLVPFAAGAMIVRQVLAAETALLFALAMGL AAGLLAGQSLAFALFATLTSVAAAGLVRNNRDRAGLFRAGLGVGLVGAAVVAALGLYAGRAGAEVLLSAVGALVGGAVLL PVAVVGLLPVVEGVFGYVTDVKLLELANLNHPALKELIVQSPGTYHHSILMGSLVEAGAQAIGANPLLARVCAYYHDLGK IRNPLYFAENQRGGENRHDALAPSMSALIVKRHVTDGLELARHWRLPRVVQDAIAQHHGTRHVGYFWGKAQRLAEEGGGR GALDEALFRYPGPRPQTREAALVMIADACEASARALEDPTADSLRALVAKRINEVFGEGQLDECALTLRDLNAISGAMVR ALEAIYHTRPEYPDRRRDEGPAVHLVAKP >Mature_749_residues MRALLVAAVAAAAGWLLAPSAAHRLPGPDALGTPAPATIKADRDYDIVDEEATARRRAETAAAERPVYHQDAGAADEAVA RVHAAFELMRDEERALREDGRGPREAAVLERRYAAQRAAFVARLQVLVRDGDLAALGTTRFTEAVERQLAELARGALAGM VIEDRKLLPAAPDAGFVVRTFRGGRPEGEQPFADAAQVRDVAEAREEVARTAAARLEKEPAAVRAALARTAEAMVRPTLV YDQAETERRRYDAAARVKPVAIPVKRGEKIIGDGERIEKRHLLVFDGIRAQRKGEDLGSVRAGGAAVVALLVSLLWRFAR RNVARFRPARRDALLLSLLYLGSLAAGFLGFAVMDALHERFPYVPAAALQYLVPFAAGAMIVRQVLAAETALLFALAMGL AAGLLAGQSLAFALFATLTSVAAAGLVRNNRDRAGLFRAGLGVGLVGAAVVAALGLYAGRAGAEVLLSAVGALVGGAVLL PVAVVGLLPVVEGVFGYVTDVKLLELANLNHPALKELIVQSPGTYHHSILMGSLVEAGAQAIGANPLLARVCAYYHDLGK IRNPLYFAENQRGGENRHDALAPSMSALIVKRHVTDGLELARHWRLPRVVQDAIAQHHGTRHVGYFWGKAQRLAEEGGGR GALDEALFRYPGPRPQTREAALVMIADACEASARALEDPTADSLRALVAKRINEVFGEGQLDECALTLRDLNAISGAMVR ALEAIYHTRPEYPDRRRDEGPAVHLVAKP
Specific function: Unknown
COG id: COG1480
COG function: function code R; Predicted membrane-associated HD superfamily hydrolase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011624 - InterPro: IPR011621 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]
EC number: NA
Molecular weight: Translated: 80094; Mature: 80094
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALLVAAVAAAAGWLLAPSAAHRLPGPDALGTPAPATIKADRDYDIVDEEATARRRAET CHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHH AAAERPVYHQDAGAADEAVARVHAAFELMRDEERALREDGRGPREAAVLERRYAAQRAAF HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VARLQVLVRDGDLAALGTTRFTEAVERQLAELARGALAGMVIEDRKLLPAAPDAGFVVRT HHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEE FRGGRPEGEQPFADAAQVRDVAEAREEVARTAAARLEKEPAAVRAALARTAEAMVRPTLV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHE YDQAETERRRYDAAARVKPVAIPVKRGEKIIGDGERIEKRHLLVFDGIRAQRKGEDLGSV ECCHHHHHHHHHHHHCCCEEEEECCCCCEECCCCHHHHHCCEEEECCCHHHHCCCCHHCC RAGGAAVVALLVSLLWRFARRNVARFRPARRDALLLSLLYLGSLAAGFLGFAVMDALHER CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPYVPAAALQYLVPFAAGAMIVRQVLAAETALLFALAMGLAAGLLAGQSLAFALFATLTS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAAGLVRNNRDRAGLFRAGLGVGLVGAAVVAALGLYAGRAGAEVLLSAVGALVGGAVLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PVAVVGLLPVVEGVFGYVTDVKLLELANLNHPALKELIVQSPGTYHHSILMGSLVEAGAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AIGANPLLARVCAYYHDLGKIRNPLYFAENQRGGENRHDALAPSMSALIVKRHVTDGLEL HCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ARHWRLPRVVQDAIAQHHGTRHVGYFWGKAQRLAEEGGGRGALDEALFRYPGPRPQTREA HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCH ALVMIADACEASARALEDPTADSLRALVAKRINEVFGEGQLDECALTLRDLNAISGAMVR HEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ALEAIYHTRPEYPDRRRDEGPAVHLVAKP HHHHHHHCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MRALLVAAVAAAAGWLLAPSAAHRLPGPDALGTPAPATIKADRDYDIVDEEATARRRAET CHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHH AAAERPVYHQDAGAADEAVARVHAAFELMRDEERALREDGRGPREAAVLERRYAAQRAAF HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VARLQVLVRDGDLAALGTTRFTEAVERQLAELARGALAGMVIEDRKLLPAAPDAGFVVRT HHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEE FRGGRPEGEQPFADAAQVRDVAEAREEVARTAAARLEKEPAAVRAALARTAEAMVRPTLV CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHE YDQAETERRRYDAAARVKPVAIPVKRGEKIIGDGERIEKRHLLVFDGIRAQRKGEDLGSV ECCHHHHHHHHHHHHCCCEEEEECCCCCEECCCCHHHHHCCEEEECCCHHHHCCCCHHCC RAGGAAVVALLVSLLWRFARRNVARFRPARRDALLLSLLYLGSLAAGFLGFAVMDALHER CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPYVPAAALQYLVPFAAGAMIVRQVLAAETALLFALAMGLAAGLLAGQSLAFALFATLTS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAAAGLVRNNRDRAGLFRAGLGVGLVGAAVVAALGLYAGRAGAEVLLSAVGALVGGAVLL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH PVAVVGLLPVVEGVFGYVTDVKLLELANLNHPALKELIVQSPGTYHHSILMGSLVEAGAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH AIGANPLLARVCAYYHDLGKIRNPLYFAENQRGGENRHDALAPSMSALIVKRHVTDGLEL HCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ARHWRLPRVVQDAIAQHHGTRHVGYFWGKAQRLAEEGGGRGALDEALFRYPGPRPQTREA HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCH ALVMIADACEASARALEDPTADSLRALVAKRINEVFGEGQLDECALTLRDLNAISGAMVR HEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH ALEAIYHTRPEYPDRRRDEGPAVHLVAKP HHHHHHHCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]