| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917997
Identifier: 220917997
GI number: 220917997
Start: 3206282
End: 3208009
Strand: Direct
Name: 220917997
Synonym: A2cp1_2898
Alternate gene names: NA
Gene position: 3206282-3208009 (Clockwise)
Preceding gene: 220917996
Following gene: 220917998
Centisome position: 63.75
GC content: 78.59
Gene sequence:
>1728_bases ATGCAGCCGAAGTCCGCCTTCCGGCGCGCGCACGTCGCGCGCCTCGCCACGCTCGCGCTCGCCGCCGCGGCCCTCGCGGC CTGCTCGTCCGGCGGCGGCGCGACCGCGCCGTCCGCGCCGTCCGCGCCGCAGGAGCCCGCCGGTGGCACGCCGGTCCCGC GGTCGCTCTCGGTGTCGCCGGCGGCCGCCACGCTCGCGACCGGCTTCACCGAGAGGCTCATCGCGATCGCCACCTTCTCC GACGGCTCGAAGCGGGACGTCACCGCCACCGCCGCCTGGGAGTCCTCGGCGCCGGCCACGGCCTCGGTGGTGGCCGGCGA GGTCACCGGCGTCGCGCCCGGCGCGGCGACGCTGAGGGCGCGCTGGTCCGGGCTGCACGGCGCCAGCGAGGTGACGGTCA CCTCGGCCGTCCTCCGGTCGATCGTCGTGACCCCGCCGTTCCCGAGCCTGCCGCTCGGCGCCGACCTGCAGCTCGCCGCG ACCGGCCTGTTCTCGGACGGCAGCGCGCGCGACGTGACCGCGGAGGCGGCCTGGGAGAGCGCCGCCCCGGCGGTCGCGGC CGTGCCGTCGCCCGGCCTGGTGCAGCCGGTCGCCACCGGCGACGCGTCCGTCTCGGCCACGCTGGCGGGGGTGAGCGGCG CCACCACGGTCAGCGTGACCGCCGCCACGCTCGAGTCGCTCGACGTGTACCCGGGCGCCGCCACCCTGGCCCGCGGCACC TCGACCGCGTTCACCGCGCTCGGGACCTACTCCGACGGCACGTCCGCGGACCTCACCGCGCAGGCGGCCTGGGACACGAG CGGGCCGGAGGTGACGCTCTCCGCGCCCGGCCTCGAGGGCGTGGTGGTCACCGGGGCCGCCGAGGGCACCGCGACCGTCA CGGCGGCGTTCGGCGGCCTCACCAGCGCGGCGGCGGTGACGGTCACCGCGGCCGGGCTGACCGGGCTCGCGGTGTCCCCG GCCGCGCTCGACCTGCCGGTGGGCCTCTCCGGACCGCTCACCGCGACCGGCACGTTCTCCGACGGCTCGACCCAGGACCT GACGGCGCAGGTGGCGTGGGTGTCCTCCGCCGCGGCGGTGGCGGCGCCATCCAACGCGCCCGGGAGCGAGGGGCTCGTCA GCGCGCTCTCGGCCGGCGACGCCACCGTCAGCGCGACGCTGTTCGGCCGGACCGCCTCGGCCGCGGTGACCGTCCGCGCG GCGGCGCTGCGGTCCATCGCGGTGACGCCCGGCGCCGCGTCGGTGCCCGCGGGCTACCAGGTCCGGTTCCAGGCGACCGG CACCTACAGCGACGGCTCGTCGCACGAGCTCACAGGCAGCGCCGTCTGGATCAGCGCCGACCCGGCGGTCGCGACGGTGG TGGCCACCGGGACCGGCGCGGGCGCGGCCAGCGGCGTGGCGCCCGGGACCGCCCGGATCTCGGCGGCGCTCGGCGGCGTG ACCGGCGAGGCGACGCTGACGGTGGGCTCGGCCCGGCTCGTCTCGGTGGCGGTGTCACCCTCCCCGTTCGACGTGGGGGT GGGCGGAACGGCGCAGCTCACCGCCACCGGCACGTTCAGCGACGGGAGCACGCTCGACGTCACGCGGCAGAGCGTCTGGA GCTCCGGCACGAAGTCGATCGCGACCGTCTCCCGGGCCGGCGTGGTGACCGGGCTGCGGGCCGGGGCGGTGACCGTCCAG GCGAACCGCGCCGGCAGGAAGGGCCGCGTCGACGGCACCGTCCGGTGA
Upstream 100 bases:
>100_bases CGCGGGTGGCCAGGCGATCGCCCCCCTGGCAGCATCCCCTGCACGCCTCGTCGCGCCGGGTCGGGGGACCCGGGCGCCGG GCGCACGGATCGGGGGATCC
Downstream 100 bases:
>100_bases GGAAGCGGGGGCGCGGCCCGCGACCTTGCTGGCCGCGCCCTCCGGTTGACGCTAGACTCACCGTCTTATGGAAGGACAGG GTCCGCTCAGCGAGGAGCTG
Product: Ig domain-containing protein group 2 domain-containing protein
Products: NA
Alternate protein names: Surface Protein; Ig Domain Domain Protein; Ig Domain Protein Group 2 Domain Protein; Ig-Like Repeat-Containing Protein; Protein With A Bacterial Immunoglobulin-Like Domain; Peptidase S8 And; YVTN Beta-Propeller Repeat-Containing Protein; Ig-Like Domain-Containing Protein; LigB Lipoprotein; LigB-Like Protein; Extracellular Serine Protease; Ligc Protein
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MQPKSAFRRAHVARLATLALAAAALAACSSGGGATAPSAPSAPQEPAGGTPVPRSLSVSPAAATLATGFTERLIAIATFS DGSKRDVTATAAWESSAPATASVVAGEVTGVAPGAATLRARWSGLHGASEVTVTSAVLRSIVVTPPFPSLPLGADLQLAA TGLFSDGSARDVTAEAAWESAAPAVAAVPSPGLVQPVATGDASVSATLAGVSGATTVSVTAATLESLDVYPGAATLARGT STAFTALGTYSDGTSADLTAQAAWDTSGPEVTLSAPGLEGVVVTGAAEGTATVTAAFGGLTSAAAVTVTAAGLTGLAVSP AALDLPVGLSGPLTATGTFSDGSTQDLTAQVAWVSSAAAVAAPSNAPGSEGLVSALSAGDATVSATLFGRTASAAVTVRA AALRSIAVTPGAASVPAGYQVRFQATGTYSDGSSHELTGSAVWISADPAVATVVATGTGAGAASGVAPGTARISAALGGV TGEATLTVGSARLVSVAVSPSPFDVGVGGTAQLTATGTFSDGSTLDVTRQSVWSSGTKSIATVSRAGVVTGLRAGAVTVQ ANRAGRKGRVDGTVR
Sequences:
>Translated_575_residues MQPKSAFRRAHVARLATLALAAAALAACSSGGGATAPSAPSAPQEPAGGTPVPRSLSVSPAAATLATGFTERLIAIATFS DGSKRDVTATAAWESSAPATASVVAGEVTGVAPGAATLRARWSGLHGASEVTVTSAVLRSIVVTPPFPSLPLGADLQLAA TGLFSDGSARDVTAEAAWESAAPAVAAVPSPGLVQPVATGDASVSATLAGVSGATTVSVTAATLESLDVYPGAATLARGT STAFTALGTYSDGTSADLTAQAAWDTSGPEVTLSAPGLEGVVVTGAAEGTATVTAAFGGLTSAAAVTVTAAGLTGLAVSP AALDLPVGLSGPLTATGTFSDGSTQDLTAQVAWVSSAAAVAAPSNAPGSEGLVSALSAGDATVSATLFGRTASAAVTVRA AALRSIAVTPGAASVPAGYQVRFQATGTYSDGSSHELTGSAVWISADPAVATVVATGTGAGAASGVAPGTARISAALGGV TGEATLTVGSARLVSVAVSPSPFDVGVGGTAQLTATGTFSDGSTLDVTRQSVWSSGTKSIATVSRAGVVTGLRAGAVTVQ ANRAGRKGRVDGTVR >Mature_575_residues MQPKSAFRRAHVARLATLALAAAALAACSSGGGATAPSAPSAPQEPAGGTPVPRSLSVSPAAATLATGFTERLIAIATFS DGSKRDVTATAAWESSAPATASVVAGEVTGVAPGAATLRARWSGLHGASEVTVTSAVLRSIVVTPPFPSLPLGADLQLAA TGLFSDGSARDVTAEAAWESAAPAVAAVPSPGLVQPVATGDASVSATLAGVSGATTVSVTAATLESLDVYPGAATLARGT STAFTALGTYSDGTSADLTAQAAWDTSGPEVTLSAPGLEGVVVTGAAEGTATVTAAFGGLTSAAAVTVTAAGLTGLAVSP AALDLPVGLSGPLTATGTFSDGSTQDLTAQVAWVSSAAAVAAPSNAPGSEGLVSALSAGDATVSATLFGRTASAAVTVRA AALRSIAVTPGAASVPAGYQVRFQATGTYSDGSSHELTGSAVWISADPAVATVVATGTGAGAASGVAPGTARISAALGGV TGEATLTVGSARLVSVAVSPSPFDVGVGGTAQLTATGTFSDGSTLDVTRQSVWSSGTKSIATVSRAGVVTGLRAGAVTVQ ANRAGRKGRVDGTVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54951; Mature: 54951
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKSAFRRAHVARLATLALAAAALAACSSGGGATAPSAPSAPQEPAGGTPVPRSLSVSP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAATLATGFTERLIAIATFSDGSKRDVTATAAWESSAPATASVVAGEVTGVAPGAATLRA HHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHH RWSGLHGASEVTVTSAVLRSIVVTPPFPSLPLGADLQLAATGLFSDGSARDVTAEAAWES HHCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHC AAPAVAAVPSPGLVQPVATGDASVSATLAGVSGATTVSVTAATLESLDVYPGAATLARGT CCCEEEECCCCCCCCEECCCCCCEEEEEECCCCCEEEEEEEEHHHHCCCCCCHHHHHCCC STAFTALGTYSDGTSADLTAQAAWDTSGPEVTLSAPGLEGVVVTGAAEGTATVTAAFGGL CCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC TSAAAVTVTAAGLTGLAVSPAALDLPVGLSGPLTATGTFSDGSTQDLTAQVAWVSSAAAV CCCCEEEEEECCCCCEEECCCCEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEE AAPSNAPGSEGLVSALSAGDATVSATLFGRTASAAVTVRAAALRSIAVTPGAASVPAGYQ ECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEHHHHEEEECCCCCCCCCCEE VRFQATGTYSDGSSHELTGSAVWISADPAVATVVATGTGAGAASGVAPGTARISAALGGV EEEEEECCCCCCCCCEECCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCC TGEATLTVGSARLVSVAVSPSPFDVGVGGTAQLTATGTFSDGSTLDVTRQSVWSSGTKSI CCCEEEEECCEEEEEEEECCCCCEECCCCEEEEEEEEECCCCCEEEHHHHHHHCCCCCHH ATVSRAGVVTGLRAGAVTVQANRAGRKGRVDGTVR HHHHHCCHHEECCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MQPKSAFRRAHVARLATLALAAAALAACSSGGGATAPSAPSAPQEPAGGTPVPRSLSVSP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAATLATGFTERLIAIATFSDGSKRDVTATAAWESSAPATASVVAGEVTGVAPGAATLRA HHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHH RWSGLHGASEVTVTSAVLRSIVVTPPFPSLPLGADLQLAATGLFSDGSARDVTAEAAWES HHCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHC AAPAVAAVPSPGLVQPVATGDASVSATLAGVSGATTVSVTAATLESLDVYPGAATLARGT CCCEEEECCCCCCCCEECCCCCCEEEEEECCCCCEEEEEEEEHHHHCCCCCCHHHHHCCC STAFTALGTYSDGTSADLTAQAAWDTSGPEVTLSAPGLEGVVVTGAAEGTATVTAAFGGL CCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCC TSAAAVTVTAAGLTGLAVSPAALDLPVGLSGPLTATGTFSDGSTQDLTAQVAWVSSAAAV CCCCEEEEEECCCCCEEECCCCEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEE AAPSNAPGSEGLVSALSAGDATVSATLFGRTASAAVTVRAAALRSIAVTPGAASVPAGYQ ECCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEHHHHEEEECCCCCCCCCCEE VRFQATGTYSDGSSHELTGSAVWISADPAVATVVATGTGAGAASGVAPGTARISAALGGV EEEEEECCCCCCCCCEECCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCC TGEATLTVGSARLVSVAVSPSPFDVGVGGTAQLTATGTFSDGSTLDVTRQSVWSSGTKSI CCCEEEEECCEEEEEEEECCCCCEECCCCEEEEEEEEECCCCCEEEHHHHHHHCCCCCHH ATVSRAGVVTGLRAGAVTVQANRAGRKGRVDGTVR HHHHHCCHHEECCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA