Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220917937
Identifier: 220917937
GI number: 220917937
Start: 3135831
End: 3137681
Strand: Reverse
Name: 220917937
Synonym: A2cp1_2838
Alternate gene names: NA
Gene position: 3137681-3135831 (Counterclockwise)
Preceding gene: 220917938
Following gene: 220917934
Centisome position: 62.39
GC content: 80.77
Gene sequence:
>1851_bases ATGGGCCGACTCCTCGCCGTGCTCCTCGCCGTCGCGCTCGCCGCGGAAGCGGCCCCGACGGCGCCGGGAGCCGTCCCCGA GCCCGCCGCGCCGGCGGAGCTGCCCGCGATCCCGCCGCCTGAGCCGGCCGCGCCCGCGCTCCCGGCCGCGGCGCCGCCCG CGGAGCCCGCCGCCTCGACGCCGGTCGCGTCGACGCCCGACGCCGCACCGGAGCCGGCCACGCCGCTCCCGCTCCCCCTG CCGCCGCCCGACGCCGCGGTGCTCGCGCCGCCGCCGGCCGCCGACCTCGCCGACCCGCTGGACCTGCTCTGGGGGCACCG GCTGGAGTTCGCGCCCGGTGGCGAGCCGCTCGTCACCATCCGGCTCATGGAGGGCCAGCGCGAGATCGCGTTCCGCCCGC TCGCGCGGGCGCGCGTGCTCCTGCGCGGCGGAGGCGAGCTCCGCGTGGAGGCCGGCACGCGCCTGCGGGTGCGCGCGCGA GAGGCCGTCCCCGCGGTGCTGGCCTGGCGCGCCCTGCTCGAGGAGGCGCCGCTCGCAGATCGCGCCCGGCTCGAGGCGGA GGCGCGGGCCTGGCGCGTGCGCGGCGTCCGCGCCGAGCCGCGGGTGGTGGGTGCGGTGTACGGCATCGCCGGGCGGGTGG TGGACAACCGCCGCGCGCTGCTGCTGGTGGACGGCGACGGGACGGAGGCGGGGGCGCGCGCGACCGTGGAGACGCTCCGG GCCGCGCACGGCGCACGGGCCACGCTGCACGCGACGCTGGTGGGCCGCCCGTCCGGGCGGCTCGAGCTGCTCGGCGACGG CGGGGCGCCGCTGGGCGAGGCGGACGCCGCGCTCACGCTCGCCGTGGAGGGCGAGGCGGGCTTCCTGGTGGAGGGCGTCG AGCACGAGCACGGGCGCGGCGGGCGGGCCCGCGAGGACCGCACCTACCGCGGCCGGCTCTACCTGACGCTCGACGCCGGC GGCGCGCTCGCGGCGGTGCACGGCGTGCCGCTCGAGGAGCTGCTGCGGGGGCTGGTGCCGAGCGAGATGCCGGCGTCGTC GCCGCGCGCGGCGCTGGAGGCGCAGGCGGTGACCGCCCGCTCCAACGTGCTCGCGCAGATCGGCACGCGCCACCTGACGG ACCCGTTCATGCTCTGCGCCGAGGTGCACTGCCAGGCGTACCGCGGCGACGCGGCCCGCACCGGCCGCACCGACGCGGCG GTGCTCGCGACGCGGGGCGAGGCGCTGTTCGGTCGCGCCGACCGCACGCTGGTGAACGCGGTCTACTCGGCGATGTGCGG CGGCCACGGCGAGCACAACGACGCGGTGTGGGACGGGACGCCGGATCCGAGCCTGCGCGGGCGGCCCGACCTCCCGCCCG CCGCGGCGGCGCGCTGGCCGGTGGGCGTGGGGACGGACGCGCTGGTGCGCAGGTTCCTGGTGGCGGGCTCCGAGGCCTAC TGCGCGCGGGCCGCGGGCGCGAGCCGCAGCCGCTTCCGCTGGACGCGCCGCCTGGACGCGGCGGCGCTGGCGCGGGTGGG CGCCGAGCTCGGGATCGGCCCGGCGACGGCGCTGCGCGTGACGGCGCGCGGGGTGTCCGGCCGCGCGCGGGAGCTGGAGG TGACGGGCGCGGCGGGCCGAGCCGAGGTCCGCGGCGAGCTGCGCATCCGCCGGCTGCTCGGCGGGCTCCCGTCGGCGATG TTCCTGGTCGAGCCGGAGCCGGGCGGCGCGCTGGCGCTCCGCGGGGGCGGCTGGGGCCACGGCGCCGGGATGTGCCAGTG GGGCGCGGTGGGGCGCGCGGAGGCCGGGCAGGACCACCGCGAGATCCTCCGCGCCTACTACTCGGGCGCCGAGGTCTCGT CCATCTACTGA
Upstream 100 bases:
>100_bases GCCGCCTCGCGGGCGGGCCGCCGGGCCTCGGCCCGCCGTGAACGTCCCGCCGCCGAGGGGTTCGCGCGCGGCGGCCGGCT CGTCGTAAGCTGGCGCGCTC
Downstream 100 bases:
>100_bases GTGGAAGCTATCGGGTGGACTCGAGCGGCCCCGGCCACGCGTCGGCGCGCTGCAGGTCGTGCAGCCGCGCGTAGCCCAGC TCGCGGAGCGCCTTCGCCGC
Product: SpoIID/LytB domain-containing protein
Products: NA
Alternate protein names: SpoIID/LytB Domain-Containing Protein; Amidase Enhancer; SpoIID Sporulation Protein; Sporulation Protein SpoIID; Stage II Sporulation Protein; Protein Related Sporulation Protein; Sporulation Protein SpoIID-Related Protein; Stage II Sporulation Protein D; Sporulation Protein Spoiid; Sporulation Protein And Related Proteins; SpoIID-Like Protein; Amidase Enhancer-Like; Spoiid/Lytb Domain Protein; Stage II Sporulation Protein D-Like; Lipoprotein
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MGRLLAVLLAVALAAEAAPTAPGAVPEPAAPAELPAIPPPEPAAPALPAAAPPAEPAASTPVASTPDAAPEPATPLPLPL PPPDAAVLAPPPAADLADPLDLLWGHRLEFAPGGEPLVTIRLMEGQREIAFRPLARARVLLRGGGELRVEAGTRLRVRAR EAVPAVLAWRALLEEAPLADRARLEAEARAWRVRGVRAEPRVVGAVYGIAGRVVDNRRALLLVDGDGTEAGARATVETLR AAHGARATLHATLVGRPSGRLELLGDGGAPLGEADAALTLAVEGEAGFLVEGVEHEHGRGGRAREDRTYRGRLYLTLDAG GALAAVHGVPLEELLRGLVPSEMPASSPRAALEAQAVTARSNVLAQIGTRHLTDPFMLCAEVHCQAYRGDAARTGRTDAA VLATRGEALFGRADRTLVNAVYSAMCGGHGEHNDAVWDGTPDPSLRGRPDLPPAAAARWPVGVGTDALVRRFLVAGSEAY CARAAGASRSRFRWTRRLDAAALARVGAELGIGPATALRVTARGVSGRARELEVTGAAGRAEVRGELRIRRLLGGLPSAM FLVEPEPGGALALRGGGWGHGAGMCQWGAVGRAEAGQDHREILRAYYSGAEVSSIY
Sequences:
>Translated_616_residues MGRLLAVLLAVALAAEAAPTAPGAVPEPAAPAELPAIPPPEPAAPALPAAAPPAEPAASTPVASTPDAAPEPATPLPLPL PPPDAAVLAPPPAADLADPLDLLWGHRLEFAPGGEPLVTIRLMEGQREIAFRPLARARVLLRGGGELRVEAGTRLRVRAR EAVPAVLAWRALLEEAPLADRARLEAEARAWRVRGVRAEPRVVGAVYGIAGRVVDNRRALLLVDGDGTEAGARATVETLR AAHGARATLHATLVGRPSGRLELLGDGGAPLGEADAALTLAVEGEAGFLVEGVEHEHGRGGRAREDRTYRGRLYLTLDAG GALAAVHGVPLEELLRGLVPSEMPASSPRAALEAQAVTARSNVLAQIGTRHLTDPFMLCAEVHCQAYRGDAARTGRTDAA VLATRGEALFGRADRTLVNAVYSAMCGGHGEHNDAVWDGTPDPSLRGRPDLPPAAAARWPVGVGTDALVRRFLVAGSEAY CARAAGASRSRFRWTRRLDAAALARVGAELGIGPATALRVTARGVSGRARELEVTGAAGRAEVRGELRIRRLLGGLPSAM FLVEPEPGGALALRGGGWGHGAGMCQWGAVGRAEAGQDHREILRAYYSGAEVSSIY >Mature_615_residues GRLLAVLLAVALAAEAAPTAPGAVPEPAAPAELPAIPPPEPAAPALPAAAPPAEPAASTPVASTPDAAPEPATPLPLPLP PPDAAVLAPPPAADLADPLDLLWGHRLEFAPGGEPLVTIRLMEGQREIAFRPLARARVLLRGGGELRVEAGTRLRVRARE AVPAVLAWRALLEEAPLADRARLEAEARAWRVRGVRAEPRVVGAVYGIAGRVVDNRRALLLVDGDGTEAGARATVETLRA AHGARATLHATLVGRPSGRLELLGDGGAPLGEADAALTLAVEGEAGFLVEGVEHEHGRGGRAREDRTYRGRLYLTLDAGG ALAAVHGVPLEELLRGLVPSEMPASSPRAALEAQAVTARSNVLAQIGTRHLTDPFMLCAEVHCQAYRGDAARTGRTDAAV LATRGEALFGRADRTLVNAVYSAMCGGHGEHNDAVWDGTPDPSLRGRPDLPPAAAARWPVGVGTDALVRRFLVAGSEAYC ARAAGASRSRFRWTRRLDAAALARVGAELGIGPATALRVTARGVSGRARELEVTGAAGRAEVRGELRIRRLLGGLPSAMF LVEPEPGGALALRGGGWGHGAGMCQWGAVGRAEAGQDHREILRAYYSGAEVSSIY
Specific function: Unknown
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63916; Mature: 63784
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLLAVLLAVALAAEAAPTAPGAVPEPAAPAELPAIPPPEPAAPALPAAAPPAEPAAST CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVASTPDAAPEPATPLPLPLPPPDAAVLAPPPAADLADPLDLLWGHRLEFAPGGEPLVTI CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCHHHHHHCCCEEECCCCCCEEEE RLMEGQREIAFRPLARARVLLRGGGELRVEAGTRLRVRAREAVPAVLAWRALLEEAPLAD EEECCCHHHHHCCHHHHEEEEECCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHCCCCH RARLEAEARAWRVRGVRAEPRVVGAVYGIAGRVVDNRRALLLVDGDGTEAGARATVETLR HHHHHHHHHHHEEECCCCCCCEEEEHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHH AAHGARATLHATLVGRPSGRLELLGDGGAPLGEADAALTLAVEGEAGFLVEGVEHEHGRG HHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCC GRAREDRTYRGRLYLTLDAGGALAAVHGVPLEELLRGLVPSEMPASSPRAALEAQAVTAR CCCCCCCCEEEEEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH SNVLAQIGTRHLTDPFMLCAEVHCQAYRGDAARTGRTDAAVLATRGEALFGRADRTLVNA HHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHCCHHHHHHHH VYSAMCGGHGEHNDAVWDGTPDPSLRGRPDLPPAAAARWPVGVGTDALVRRFLVAGSEAY HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCHHH CARAAGASRSRFRWTRRLDAAALARVGAELGIGPATALRVTARGVSGRARELEVTGAAGR HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCC AEVRGELRIRRLLGGLPSAMFLVEPEPGGALALRGGGWGHGAGMCQWGAVGRAEAGQDHR HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHH EILRAYYSGAEVSSIY HHHHHHHCCCCCCCCC >Mature Secondary Structure GRLLAVLLAVALAAEAAPTAPGAVPEPAAPAELPAIPPPEPAAPALPAAAPPAEPAAST HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVASTPDAAPEPATPLPLPLPPPDAAVLAPPPAADLADPLDLLWGHRLEFAPGGEPLVTI CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHCCHHHHHHCCCEEECCCCCCEEEE RLMEGQREIAFRPLARARVLLRGGGELRVEAGTRLRVRAREAVPAVLAWRALLEEAPLAD EEECCCHHHHHCCHHHHEEEEECCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHCCCCH RARLEAEARAWRVRGVRAEPRVVGAVYGIAGRVVDNRRALLLVDGDGTEAGARATVETLR HHHHHHHHHHHEEECCCCCCCEEEEHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHH AAHGARATLHATLVGRPSGRLELLGDGGAPLGEADAALTLAVEGEAGFLVEGVEHEHGRG HHCCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCC GRAREDRTYRGRLYLTLDAGGALAAVHGVPLEELLRGLVPSEMPASSPRAALEAQAVTAR CCCCCCCCEEEEEEEEEECCCCEEEECCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH SNVLAQIGTRHLTDPFMLCAEVHCQAYRGDAARTGRTDAAVLATRGEALFGRADRTLVNA HHHHHHHCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHCCHHHHHHHH VYSAMCGGHGEHNDAVWDGTPDPSLRGRPDLPPAAAARWPVGVGTDALVRRFLVAGSEAY HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCCCHHH CARAAGASRSRFRWTRRLDAAALARVGAELGIGPATALRVTARGVSGRARELEVTGAAGR HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCC AEVRGELRIRRLLGGLPSAMFLVEPEPGGALALRGGGWGHGAGMCQWGAVGRAEAGQDHR HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEECCCCCCCCCCCHHH EILRAYYSGAEVSSIY HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA