Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220916369
Identifier: 220916369
GI number: 220916369
Start: 1414829
End: 1415173
Strand: Reverse
Name: 220916369
Synonym: A2cp1_1263
Alternate gene names: NA
Gene position: 1415173-1414829 (Counterclockwise)
Preceding gene: 220916371
Following gene: 220916365
Centisome position: 28.14
GC content: 73.62
Gene sequence:
>345_bases ATGGCGACCACCTGCTACGGCTGCGGGGCGACGCTGCGCATCGACGGACCGGTGGGACGCCGGTCCACCTGCCCCGAGTG CGACGCGGATCTGCACACCTGCATGTGCTGCCGCCACCATGACGAGGCGGCGGCGCACCAGTGCCGGGAGCCGCACGCCG ACCACGTGGTGGAGAAGGACGCCTCGAACGCCTGCGATCTGTTCCAGCTCGGAGACGGCGCCTCGCGCCGGCGCACCGGC CGCTCCGAGGCCGCGCGCAACGCGCTCGGCGCGCTGTTCGGCGAGGCGCCCCGGGCGACCGAGGATCCCCGCGATGCGCT CGAGGCGCTGTTCCGGAAGAAGTAG
Upstream 100 bases:
>100_bases GGCCATGCCGCCGACCGCGATGCGGTCGAGGAGGAGGAACCGGCCGTAGGGTATGGGCTTCCGCATGCAGGGGGCCCGGG GGTCCGGCTATGATACCCCG
Downstream 100 bases:
>100_bases ACGGGCCCCGCGGACCGGGTGCCGCCGTCAGGAGGTCTCGGCCGCGATCCAGGCGAGGTAGGCGTCGCTCCCCGCCTCCA CCGGCAGCACCAGCACCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MATTCYGCGATLRIDGPVGRRSTCPECDADLHTCMCCRHHDEAAAHQCREPHADHVVEKDASNACDLFQLGDGASRRRTG RSEAARNALGALFGEAPRATEDPRDALEALFRKK
Sequences:
>Translated_114_residues MATTCYGCGATLRIDGPVGRRSTCPECDADLHTCMCCRHHDEAAAHQCREPHADHVVEKDASNACDLFQLGDGASRRRTG RSEAARNALGALFGEAPRATEDPRDALEALFRKK >Mature_113_residues ATTCYGCGATLRIDGPVGRRSTCPECDADLHTCMCCRHHDEAAAHQCREPHADHVVEKDASNACDLFQLGDGASRRRTGR SEAARNALGALFGEAPRATEDPRDALEALFRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12370; Mature: 12239
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 8.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTCYGCGATLRIDGPVGRRSTCPECDADLHTCMCCRHHDEAAAHQCREPHADHVVEKD CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCC ASNACDLFQLGDGASRRRTGRSEAARNALGALFGEAPRATEDPRDALEALFRKK CCCCCCHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure ATTCYGCGATLRIDGPVGRRSTCPECDADLHTCMCCRHHDEAAAHQCREPHADHVVEKD CCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHCC ASNACDLFQLGDGASRRRTGRSEAARNALGALFGEAPRATEDPRDALEALFRKK CCCCCCHHHCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA