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The map label for this gene is paiB [H]

Identifier: 220914942

GI number: 220914942

Start: 319388

End: 320011

Strand: Reverse

Name: paiB [H]

Synonym: Mnod_8096

Alternate gene names: 220914942

Gene position: 320011-319388 (Counterclockwise)

Preceding gene: 220914944

Following gene: 220914941

Centisome position: 69.86

GC content: 71.47

Gene sequence:

>624_bases
ATGTACACGCCCCCCGCCTTCCGCGACGACGACCCAGAGAGCCTGCGGGCGACGATGCGCGCCGCGCGGCTGGCGAACCT
CGTCACTGCCACGGCGGACGGGCCGCTGGTCACACCGCTGCCCCTCTTCCTCGACGAGAGCGAGGGCGAGCACGGCGTGA
TCTACGGCCACCTCGCGAAGGCCAATCCCCAGTGGCGGGTCCCGCCGGTCGGCGAGGGTCTGGCGATCTTCATGGGGCCG
GACGCCTACGTCACGCCGGCGTGGTACGCGACCAAAGAGGAGACGGGTAAGGTCGTGCCGACCTGGAACTACGTCACGGT
CCACGCGCACGGCCCCATCGAGTTCTTCCACGATGCGGACCGCCTGCTCGACGCCGTGACGCGGCTGACGAACCTGCACG
AGGGGCCGCGGGCGAAGCCGTGGGCGGTGAGCGAGGCGCCAGCCGAGTTCATCGCCGCTCAGCTGCGCGGCATCGTCGGC
CTGCGCATGCCGATCAGCCGCCTGGAGGGCAAGCGCAAGCTGAGCCAGAACCGGAACGCGACCGACCGTGCCGGCGTGGC
GGCGGGTCTCGCGACGAGCGAGCGCGCATCCGACCGCGAGGTCGCCCCTCTCATCCCGTCGTGA

Upstream 100 bases:

>100_bases
GCCCTCCTCCATCAACTGGACCACCTCAAACCCGCTGAACTGGCTGTTCCCAGCAAGCCAGATTGCCGGCATCCGTCCTG
GCGACGCAAGGAGTTCCGCG

Downstream 100 bases:

>100_bases
ACGTCGTCGGTGTCGTCACAGCCATGCCAGACCTGAGCCAACTCGCCCTGTACTTCGCCGCGGCCTTCGTGCTCGCCGTC
ACGCCCGGTCCGGGCCTCTT

Product: FMN-binding negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MYTPPAFRDDDPESLRATMRAARLANLVTATADGPLVTPLPLFLDESEGEHGVIYGHLAKANPQWRVPPVGEGLAIFMGP
DAYVTPAWYATKEETGKVVPTWNYVTVHAHGPIEFFHDADRLLDAVTRLTNLHEGPRAKPWAVSEAPAEFIAAQLRGIVG
LRMPISRLEGKRKLSQNRNATDRAGVAAGLATSERASDREVAPLIPS

Sequences:

>Translated_207_residues
MYTPPAFRDDDPESLRATMRAARLANLVTATADGPLVTPLPLFLDESEGEHGVIYGHLAKANPQWRVPPVGEGLAIFMGP
DAYVTPAWYATKEETGKVVPTWNYVTVHAHGPIEFFHDADRLLDAVTRLTNLHEGPRAKPWAVSEAPAEFIAAQLRGIVG
LRMPISRLEGKRKLSQNRNATDRAGVAAGLATSERASDREVAPLIPS
>Mature_207_residues
MYTPPAFRDDDPESLRATMRAARLANLVTATADGPLVTPLPLFLDESEGEHGVIYGHLAKANPQWRVPPVGEGLAIFMGP
DAYVTPAWYATKEETGKVVPTWNYVTVHAHGPIEFFHDADRLLDAVTRLTNLHEGPRAKPWAVSEAPAEFIAAQLRGIVG
LRMPISRLEGKRKLSQNRNATDRAGVAAGLATSERASDREVAPLIPS

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=107, Percent_Identity=34.5794392523364, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 22524; Mature: 22524

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTPPAFRDDDPESLRATMRAARLANLVTATADGPLVTPLPLFLDESEGEHGVIYGHLAK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEC
ANPQWRVPPVGEGLAIFMGPDAYVTPAWYATKEETGKVVPTWNYVTVHAHGPIEFFHDAD
CCCCCCCCCCCCCEEEEECCCCEECCCEEECCCCCCCEEECCCEEEEEECCCHHHHHHHH
RLLDAVTRLTNLHEGPRAKPWAVSEAPAEFIAAQLRGIVGLRMPISRLEGKRKLSQNRNA
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
TDRAGVAAGLATSERASDREVAPLIPS
CHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYTPPAFRDDDPESLRATMRAARLANLVTATADGPLVTPLPLFLDESEGEHGVIYGHLAK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEEEC
ANPQWRVPPVGEGLAIFMGPDAYVTPAWYATKEETGKVVPTWNYVTVHAHGPIEFFHDAD
CCCCCCCCCCCCCEEEEECCCCEECCCEEECCCCCCCEEECCCEEEEEECCCHHHHHHHH
RLLDAVTRLTNLHEGPRAKPWAVSEAPAEFIAAQLRGIVGLRMPISRLEGKRKLSQNRNA
HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
TDRAGVAAGLATSERASDREVAPLIPS
CHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]