Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905566

Identifier: 220905566

GI number: 220905566

Start: 2771120

End: 2772832

Strand: Reverse

Name: 220905566

Synonym: Ddes_2305

Alternate gene names: NA

Gene position: 2772832-2771120 (Counterclockwise)

Preceding gene: 220905567

Following gene: 220905565

Centisome position: 96.5

GC content: 66.9

Gene sequence:

>1713_bases
ATGCTGCCGCCGGCCCTTGTGGCCGGCGGTCTTGTCTTGGCACGCCCGGTAAAAGCCGAAGGTGCCGAGGCCCTGCCTGC
TCATTCCCCGGCATCTGGGGGCGCCCTCGCTGTAACGGCCGGTGCCGGGGGGGCTGCCGGAGAAAACCCGGTGGAAGAAG
GAGCGTTATCAGCACCACTGGTTCTTGTCAGCCCCATTGAGCGCAGTGAAACCGTTGTGGTACGCCCGCCCCTCAGTCAT
GCGTCTGGTCTGGTTCTGGCCGGGGGGCGCGCCCGTTTGCGGGCCTTGCGGGCCGCCGCTGAGGCCCTGCCCAACCGGCG
CGACATCCGCATGGGCGCGGTCAGGGCAGAAGAGCGCCTGGCGCTGGCCGCCCACCTTTACAGAGCCGTGAACACGCCCA
AAGCTGTGGGCACGCCACATTCTGCCGGCAACGGTCTTGCCCGGGCGGAAGTGAGCCTTGAGGTACGCCCGGCGGCAGCC
GCAGGCATGTCGCATATTTTGCACAGCTTTGACCTTATGCAGATGCGTCTGCAACTGTTGCGGGAAAGCGCGGCCCTTTT
GCAGCTTATGAACAGCCGTCTTTTGCCGGAAACGAGGCAAGGGGCGGCCGGTCCGGCCAATCCTGACAGCTCGGGCGGTC
CGGCCATGTCGGCCAGTCCAGACGGATCAGACTGGTCCGTTTTTGGCCGCAGCGCCTTCCGCGCGCCTGTCAGCCTGTCC
GACGTGGGGGGACACGGAGAGCAGCGGGGTAACGCGCACAAAAATGCCCTGGACGAGCTTTTTTCCGGCCGGGCCGGTAC
GGGTATGGGCGCCCGCCGCCCGCCGCCCGCCGTTGTCGTATCCCCCGGGCGGACCGAGGCCAAGCCAGATTTCACGGGCG
GCGTTTCTGGCGCTGCTTTGGTCCCTGCTTCAGCCGTTGCCGAGGGGGCTGCCGCGGCAACGGCCGCAGGCGAGAGGGAT
GCGCAACCTGTGCCGTCCGGCAGCGTTGCTTCGGCAAATACTGTGCCCAAAGCCGCTCCGCCCCTGCAGACACCGCCAGC
CCTGTCGGACGAGGTGTGGGCGCAAAGCCACTGGAGCCTTGCCGCCCGTCGCTTGCAGGCCATGTTTGACGTGCAGGACA
TGCTGGTGGATGCCGATCCGGATGGCTGGCTTGTGCAGGCCGGGGATCTGCCCCTGCTGGAACAGGCGGCCCTGCTCGTG
CCGGACAGTCCCTCGGTATGGCTTTTGCTGGCCGAAGCGCAGATGCGCCATGATCTGCCCCTGCAAAGCGTAACCTCCTG
TGACGCGGCCCTTGATCTGGATTCCGGGTTGAGCCGCGCGCGCTATATCCGGGCGCTCGGGCATCTGCGCCTGCAACAGC
TGGCGCTTGCCGAGGCTGACCTGACAGTTTCCCTGGCCCGCCGGCACGGCATCGAGCCACAAGGCGAAGACCGGGCGCGG
CGTTTACGCGCCCGCGGCGCGGTGCGCATGCAGCGGCAGGATACCGCGGGCATGTGTGAAGATTTCAGCGCGGCCTGCGC
CCTTGGCGATTGCGAGGGGCTTGTTCTGGTGCGCGCACAGGGGCAGTGTCTGCCTCCTGCCGTTGTGAAACTGCGGGAAG
CCGCATCATCATCTGCGAACGGGGAGGAGCCGCCCGCAGCCGCGCAGGAAATGCCGCCTGTGCCGCAGAAAACAGATACG
CCGTTGCCCGGCGGCATTGAAAAAAGGAAGTGA

Upstream 100 bases:

>100_bases
AAGATTGTCCAGGCTATCGAGGCCAAGAAGTAAGCCCCTGCGGGCTTTGAATCTTCTGTTTTTTTGCACAGTCATGACAC
TGGCTGTGCCGGGATTTTGC

Downstream 100 bases:

>100_bases
CAGCGTGAGCCGCAACCCTCTGCTCAAGGTCTATGGGCATGTATACCCTGTGGACCGGGAATTTTATGATGCTCTGGCTC
ACGCCTGTGCGGATGCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPLVLVSPIERSETVVVRPPLSH
ASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERLALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAA
AGMSHILHSFDLMQMRLQLLRESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS
DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAALVPASAVAEGAAAATAAGERD
AQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSLAARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLV
PDSPSVWLLLAEAQMRHDLPLQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR
RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSANGEEPPAAAQEMPPVPQKTDT
PLPGGIEKRK

Sequences:

>Translated_570_residues
MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPLVLVSPIERSETVVVRPPLSH
ASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERLALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAA
AGMSHILHSFDLMQMRLQLLRESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS
DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAALVPASAVAEGAAAATAAGERD
AQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSLAARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLV
PDSPSVWLLLAEAQMRHDLPLQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR
RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSANGEEPPAAAQEMPPVPQKTDT
PLPGGIEKRK
>Mature_570_residues
MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPLVLVSPIERSETVVVRPPLSH
ASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERLALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAA
AGMSHILHSFDLMQMRLQLLRESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS
DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAALVPASAVAEGAAAATAAGERD
AQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSLAARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLV
PDSPSVWLLLAEAQMRHDLPLQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR
RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSANGEEPPAAAQEMPPVPQKTDT
PLPGGIEKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58762; Mature: 58762

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPL
CCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCE
VLVSPIERSETVVVRPPLSHASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERL
EEECCCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
ALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAAAGMSHILHSFDLMQMRLQLL
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
RESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS
HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCHH
DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAAL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH
VPASAVAEGAAAATAAGERDAQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLVPDSPSVWLLLAEAQMRHDLP
HHHHHHHHHHHHHHHEECCCCCCEEEECCCCHHHHCEEECCCCCCEEEEEECHHHHCCCC
LQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH
RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSAN
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC
GEEPPAAAQEMPPVPQKTDTPLPGGIEKRK
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPL
CCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCE
VLVSPIERSETVVVRPPLSHASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERL
EEECCCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
ALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAAAGMSHILHSFDLMQMRLQLL
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
RESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS
HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCHH
DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAAL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH
VPASAVAEGAAAATAAGERDAQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSL
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLVPDSPSVWLLLAEAQMRHDLP
HHHHHHHHHHHHHHHEECCCCCCEEEECCCCHHHHCEEECCCCCCEEEEEECHHHHCCCC
LQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH
RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSAN
HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC
GEEPPAAAQEMPPVPQKTDTPLPGGIEKRK
CCCCCCHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA