| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905566
Identifier: 220905566
GI number: 220905566
Start: 2771120
End: 2772832
Strand: Reverse
Name: 220905566
Synonym: Ddes_2305
Alternate gene names: NA
Gene position: 2772832-2771120 (Counterclockwise)
Preceding gene: 220905567
Following gene: 220905565
Centisome position: 96.5
GC content: 66.9
Gene sequence:
>1713_bases ATGCTGCCGCCGGCCCTTGTGGCCGGCGGTCTTGTCTTGGCACGCCCGGTAAAAGCCGAAGGTGCCGAGGCCCTGCCTGC TCATTCCCCGGCATCTGGGGGCGCCCTCGCTGTAACGGCCGGTGCCGGGGGGGCTGCCGGAGAAAACCCGGTGGAAGAAG GAGCGTTATCAGCACCACTGGTTCTTGTCAGCCCCATTGAGCGCAGTGAAACCGTTGTGGTACGCCCGCCCCTCAGTCAT GCGTCTGGTCTGGTTCTGGCCGGGGGGCGCGCCCGTTTGCGGGCCTTGCGGGCCGCCGCTGAGGCCCTGCCCAACCGGCG CGACATCCGCATGGGCGCGGTCAGGGCAGAAGAGCGCCTGGCGCTGGCCGCCCACCTTTACAGAGCCGTGAACACGCCCA AAGCTGTGGGCACGCCACATTCTGCCGGCAACGGTCTTGCCCGGGCGGAAGTGAGCCTTGAGGTACGCCCGGCGGCAGCC GCAGGCATGTCGCATATTTTGCACAGCTTTGACCTTATGCAGATGCGTCTGCAACTGTTGCGGGAAAGCGCGGCCCTTTT GCAGCTTATGAACAGCCGTCTTTTGCCGGAAACGAGGCAAGGGGCGGCCGGTCCGGCCAATCCTGACAGCTCGGGCGGTC CGGCCATGTCGGCCAGTCCAGACGGATCAGACTGGTCCGTTTTTGGCCGCAGCGCCTTCCGCGCGCCTGTCAGCCTGTCC GACGTGGGGGGACACGGAGAGCAGCGGGGTAACGCGCACAAAAATGCCCTGGACGAGCTTTTTTCCGGCCGGGCCGGTAC GGGTATGGGCGCCCGCCGCCCGCCGCCCGCCGTTGTCGTATCCCCCGGGCGGACCGAGGCCAAGCCAGATTTCACGGGCG GCGTTTCTGGCGCTGCTTTGGTCCCTGCTTCAGCCGTTGCCGAGGGGGCTGCCGCGGCAACGGCCGCAGGCGAGAGGGAT GCGCAACCTGTGCCGTCCGGCAGCGTTGCTTCGGCAAATACTGTGCCCAAAGCCGCTCCGCCCCTGCAGACACCGCCAGC CCTGTCGGACGAGGTGTGGGCGCAAAGCCACTGGAGCCTTGCCGCCCGTCGCTTGCAGGCCATGTTTGACGTGCAGGACA TGCTGGTGGATGCCGATCCGGATGGCTGGCTTGTGCAGGCCGGGGATCTGCCCCTGCTGGAACAGGCGGCCCTGCTCGTG CCGGACAGTCCCTCGGTATGGCTTTTGCTGGCCGAAGCGCAGATGCGCCATGATCTGCCCCTGCAAAGCGTAACCTCCTG TGACGCGGCCCTTGATCTGGATTCCGGGTTGAGCCGCGCGCGCTATATCCGGGCGCTCGGGCATCTGCGCCTGCAACAGC TGGCGCTTGCCGAGGCTGACCTGACAGTTTCCCTGGCCCGCCGGCACGGCATCGAGCCACAAGGCGAAGACCGGGCGCGG CGTTTACGCGCCCGCGGCGCGGTGCGCATGCAGCGGCAGGATACCGCGGGCATGTGTGAAGATTTCAGCGCGGCCTGCGC CCTTGGCGATTGCGAGGGGCTTGTTCTGGTGCGCGCACAGGGGCAGTGTCTGCCTCCTGCCGTTGTGAAACTGCGGGAAG CCGCATCATCATCTGCGAACGGGGAGGAGCCGCCCGCAGCCGCGCAGGAAATGCCGCCTGTGCCGCAGAAAACAGATACG CCGTTGCCCGGCGGCATTGAAAAAAGGAAGTGA
Upstream 100 bases:
>100_bases AAGATTGTCCAGGCTATCGAGGCCAAGAAGTAAGCCCCTGCGGGCTTTGAATCTTCTGTTTTTTTGCACAGTCATGACAC TGGCTGTGCCGGGATTTTGC
Downstream 100 bases:
>100_bases CAGCGTGAGCCGCAACCCTCTGCTCAAGGTCTATGGGCATGTATACCCTGTGGACCGGGAATTTTATGATGCTCTGGCTC ACGCCTGTGCGGATGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPLVLVSPIERSETVVVRPPLSH ASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERLALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAA AGMSHILHSFDLMQMRLQLLRESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAALVPASAVAEGAAAATAAGERD AQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSLAARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLV PDSPSVWLLLAEAQMRHDLPLQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSANGEEPPAAAQEMPPVPQKTDT PLPGGIEKRK
Sequences:
>Translated_570_residues MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPLVLVSPIERSETVVVRPPLSH ASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERLALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAA AGMSHILHSFDLMQMRLQLLRESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAALVPASAVAEGAAAATAAGERD AQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSLAARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLV PDSPSVWLLLAEAQMRHDLPLQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSANGEEPPAAAQEMPPVPQKTDT PLPGGIEKRK >Mature_570_residues MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPLVLVSPIERSETVVVRPPLSH ASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERLALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAA AGMSHILHSFDLMQMRLQLLRESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAALVPASAVAEGAAAATAAGERD AQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSLAARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLV PDSPSVWLLLAEAQMRHDLPLQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSANGEEPPAAAQEMPPVPQKTDT PLPGGIEKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58762; Mature: 58762
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPL CCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCE VLVSPIERSETVVVRPPLSHASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERL EEECCCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH ALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAAAGMSHILHSFDLMQMRLQLL HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH RESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCHH DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAAL CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH VPASAVAEGAAAATAAGERDAQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLVPDSPSVWLLLAEAQMRHDLP HHHHHHHHHHHHHHHEECCCCCCEEEECCCCHHHHCEEECCCCCCEEEEEECHHHHCCCC LQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSAN HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC GEEPPAAAQEMPPVPQKTDTPLPGGIEKRK CCCCCCHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPPALVAGGLVLARPVKAEGAEALPAHSPASGGALAVTAGAGGAAGENPVEEGALSAPL CCCHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCE VLVSPIERSETVVVRPPLSHASGLVLAGGRARLRALRAAAEALPNRRDIRMGAVRAEERL EEECCCCCCCEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH ALAAHLYRAVNTPKAVGTPHSAGNGLARAEVSLEVRPAAAAGMSHILHSFDLMQMRLQLL HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH RESAALLQLMNSRLLPETRQGAAGPANPDSSGGPAMSASPDGSDWSVFGRSAFRAPVSLS HHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCHH DVGGHGEQRGNAHKNALDELFSGRAGTGMGARRPPPAVVVSPGRTEAKPDFTGGVSGAAL CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHH VPASAVAEGAAAATAAGERDAQPVPSGSVASANTVPKAAPPLQTPPALSDEVWAQSHWSL CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AARRLQAMFDVQDMLVDADPDGWLVQAGDLPLLEQAALLVPDSPSVWLLLAEAQMRHDLP HHHHHHHHHHHHHHHEECCCCCCEEEECCCCHHHHCEEECCCCCCEEEEEECHHHHCCCC LQSVTSCDAALDLDSGLSRARYIRALGHLRLQQLALAEADLTVSLARRHGIEPQGEDRAR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHH RLRARGAVRMQRQDTAGMCEDFSAACALGDCEGLVLVRAQGQCLPPAVVKLREAASSSAN HHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCC GEEPPAAAQEMPPVPQKTDTPLPGGIEKRK CCCCCCHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA