Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
---|---|
Accession | NC_011883 |
Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220905565
Identifier: 220905565
GI number: 220905565
Start: 2770771
End: 2771115
Strand: Reverse
Name: 220905565
Synonym: Ddes_2304
Alternate gene names: NA
Gene position: 2771115-2770771 (Counterclockwise)
Preceding gene: 220905566
Following gene: 220905562
Centisome position: 96.44
GC content: 58.84
Gene sequence:
>345_bases GTGAGCCGCAACCCTCTGCTCAAGGTCTATGGGCATGTATACCCTGTGGACCGGGAATTTTATGATGCTCTGGCTCACGC CTGTGCGGATGCCCTGCCTGACGAAACGGATATTCCGGTCATCGAGATGGACGGGGACATGGCGCGCATATCCTTTGAGG GCACGTATTTTCCTGTGGACGAAACGCTGGAGGCGCTGGCCCGCGGGCTGCGGCCAGACCACAAGGGCAAACTCGATGTG CTGGACATGGAAGGCTGGCGCCTGACCCGCCATGTCTTTGATACGGGGCACATCAAAAGCAGCAGCGCCTCGCTGAACAA CGTGCTGGACTATTCCGGACACTAG
Upstream 100 bases:
>100_bases AACGGGGAGGAGCCGCCCGCAGCCGCGCAGGAAATGCCGCCTGTGCCGCAGAAAACAGATACGCCGTTGCCCGGCGGCAT TGAAAAAAGGAAGTGACAGC
Downstream 100 bases:
>100_bases CGCAGCTTGTCTTTGAAATTGCCCTGACGGCTGTGCGGGCAGACGCCCGCCGTGGAGGCGCAAACGCAGTAACGGGCGTG TTCCGGCCTTTGAGAATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSRNPLLKVYGHVYPVDREFYDALAHACADALPDETDIPVIEMDGDMARISFEGTYFPVDETLEALARGLRPDHKGKLDV LDMEGWRLTRHVFDTGHIKSSSASLNNVLDYSGH
Sequences:
>Translated_114_residues MSRNPLLKVYGHVYPVDREFYDALAHACADALPDETDIPVIEMDGDMARISFEGTYFPVDETLEALARGLRPDHKGKLDV LDMEGWRLTRHVFDTGHIKSSSASLNNVLDYSGH >Mature_113_residues SRNPLLKVYGHVYPVDREFYDALAHACADALPDETDIPVIEMDGDMARISFEGTYFPVDETLEALARGLRPDHKGKLDVL DMEGWRLTRHVFDTGHIKSSSASLNNVLDYSGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12805; Mature: 12674
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNPLLKVYGHVYPVDREFYDALAHACADALPDETDIPVIEMDGDMARISFEGTYFPVD CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCEEECHH ETLEALARGLRPDHKGKLDVLDMEGWRLTRHVFDTGHIKSSSASLNNVLDYSGH HHHHHHHHCCCCCCCCCEEEEECCCCEEEEEHHCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure SRNPLLKVYGHVYPVDREFYDALAHACADALPDETDIPVIEMDGDMARISFEGTYFPVD CCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCEEECHH ETLEALARGLRPDHKGKLDVLDMEGWRLTRHVFDTGHIKSSSASLNNVLDYSGH HHHHHHHHCCCCCCCCCEEEEECCCCEEEEEHHCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA