Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220905567

Identifier: 220905567

GI number: 220905567

Start: 2772900

End: 2773487

Strand: Reverse

Name: 220905567

Synonym: Ddes_2306

Alternate gene names: NA

Gene position: 2773487-2772900 (Counterclockwise)

Preceding gene: 220905569

Following gene: 220905566

Centisome position: 96.52

GC content: 60.03

Gene sequence:

>588_bases
ATGAAACCTGTGCGCAACGTCTTATATCTTGTTTTGCTGGCCTTTCTGGCAACTGCCTGCGGCCCGGCCAACAATGTGCG
GCTGATGCCGCCGCCCTTTATGGAAGGCGGCGTGCTGCCCGGTCCCAAGGCCCCCCGGGTGACGGTGGTGGCTTTTGAGG
ACAAGCGGCAGGATCAGACCGTGATCGGTTCCCGCCGCGACAACAGCGCCTTTGTCACCAGCGACAGCGTTACCCAGTGG
ATCAGCAAGGCTCTGGCTGATGAACTGGCCCGTAACGGCCTGCAGGTTTCCTATGCCGACAGCGTCAATCAGGCGCGGGC
GGGCAATCCCGACTACCTCGTAACCGGCGACGTGGATCAGGTCTGGCTCAAGGAAAATTCCGCCACAGACCTTGCCACCA
ACATGCGCGTGAACTACGCCCTGGCCAACCGGCAGGGGCGCATCTACAGCGAAACGCTCAATGCCTCGCAGTCGCGTACG
GTCATGCCCCTGGGGTCCACGGCTGATAACCTCATGCTGGACACGTTGCGTGAACTTATCAAACCCATGGCGCAAAAGAT
TGTCCAGGCTATCGAGGCCAAGAAGTAA

Upstream 100 bases:

>100_bases
ATTCCTTTAGCATGGGGGTATGCCGCCTTGCAAGGCTGGCTTTTTCCGTATATAGCTCACGGGAATACTCTCGAGAATTT
CTATAAAACGCGAGGCTGTC

Downstream 100 bases:

>100_bases
GCCCCTGCGGGCTTTGAATCTTCTGTTTTTTTGCACAGTCATGACACTGGCTGTGCCGGGATTTTGCATGCTGCCGCCGG
CCCTTGTGGCCGGCGGTCTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKPVRNVLYLVLLAFLATACGPANNVRLMPPPFMEGGVLPGPKAPRVTVVAFEDKRQDQTVIGSRRDNSAFVTSDSVTQW
ISKALADELARNGLQVSYADSVNQARAGNPDYLVTGDVDQVWLKENSATDLATNMRVNYALANRQGRIYSETLNASQSRT
VMPLGSTADNLMLDTLRELIKPMAQKIVQAIEAKK

Sequences:

>Translated_195_residues
MKPVRNVLYLVLLAFLATACGPANNVRLMPPPFMEGGVLPGPKAPRVTVVAFEDKRQDQTVIGSRRDNSAFVTSDSVTQW
ISKALADELARNGLQVSYADSVNQARAGNPDYLVTGDVDQVWLKENSATDLATNMRVNYALANRQGRIYSETLNASQSRT
VMPLGSTADNLMLDTLRELIKPMAQKIVQAIEAKK
>Mature_195_residues
MKPVRNVLYLVLLAFLATACGPANNVRLMPPPFMEGGVLPGPKAPRVTVVAFEDKRQDQTVIGSRRDNSAFVTSDSVTQW
ISKALADELARNGLQVSYADSVNQARAGNPDYLVTGDVDQVWLKENSATDLATNMRVNYALANRQGRIYSETLNASQSRT
VMPLGSTADNLMLDTLRELIKPMAQKIVQAIEAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21337; Mature: 21337

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVRNVLYLVLLAFLATACGPANNVRLMPPPFMEGGVLPGPKAPRVTVVAFEDKRQDQT
CCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHH
VIGSRRDNSAFVTSDSVTQWISKALADELARNGLQVSYADSVNQARAGNPDYLVTGDVDQ
HHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCCEEEECCCCE
VWLKENSATDLATNMRVNYALANRQGRIYSETLNASQSRTVMPLGSTADNLMLDTLRELI
EEECCCCCCHHHHHCEEEEEEECCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHH
KPMAQKIVQAIEAKK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKPVRNVLYLVLLAFLATACGPANNVRLMPPPFMEGGVLPGPKAPRVTVVAFEDKRQDQT
CCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCHH
VIGSRRDNSAFVTSDSVTQWISKALADELARNGLQVSYADSVNQARAGNPDYLVTGDVDQ
HHCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHCCCCCCEEEECCCCE
VWLKENSATDLATNMRVNYALANRQGRIYSETLNASQSRTVMPLGSTADNLMLDTLRELI
EEECCCCCCHHHHHCEEEEEEECCCCCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHH
KPMAQKIVQAIEAKK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA