Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is msrAB [H]
Identifier: 220905211
GI number: 220905211
Start: 2349528
End: 2350583
Strand: Reverse
Name: msrAB [H]
Synonym: Ddes_1949
Alternate gene names: 220905211
Gene position: 2350583-2349528 (Counterclockwise)
Preceding gene: 220905212
Following gene: 220905208
Centisome position: 81.8
GC content: 61.84
Gene sequence:
>1056_bases ATGAGCCAACGTGTCTTTTTTCTGATTCTGACCGCATGGCTGCTCTGCGGCGCTTTTGTCCCGGCCGCAGCGGATTGCGC CGCTGCCGGGCCAGTTGATGCAGCTTTACCGGAGACTGCCATGAAACCATCTTTTCCCATGCCGCCCCTTTCCGGGCCGG AAGCGGACATTATTTTGCGTAAAGCCACGGAAGCCCCGTATTCCGGGCAATATACCAACAAACGCGAAGCCGGGACCTAT GTGTGCCGCCAGTGCGGCACGCCTCTTTACAGCTCGCGCGACAAGTTTGAATCCGGCTGCGGCTGGCCCAGCTTTGACGA CGAACTGCCCGGTGCGGTGCGCCGCCAGCCCGATGCGGACGGCAGAAGGGTGGAAATTGTCTGTGCAAACTGCGGCGGGC ATCTGGGGCATGTTTTTGCGGGCGAGGGTTTCACCGCCAAGAATACCCGGCATTGCGTCAACTCGCTGTCCATGTCCTTT TATCCGGCAGGCAGCCCGGAAGAGGCGCAGGCGCTGGCCCGGTCCTCCCCGCAGGGTTGTACGGCCACCGCCATCGTGGC CGGAGGATGTTTTTGGGGAGTGGAAGATGCTTTCAGAAAGATGCCGGGCGTATGCGCCGCTGTTTCCGGCTATACCGGAG GCCGTACGCCGGACCCGACCTATGAGGCCGTGTGCGGCGGCAATACCGGACACGCCGAGGCAGTGCGCGTGAGCTTTGAC CCGTCTGTGGTCAGCTACGAGCAGATTTTGCGCCGTTTTTTTGAAATCCACGATCCCACGCAGCTTGATCGCCAGGGACC GGACGTGGGCGATCAGTACCGCTCGGCTGTATTTTTTCTTGATGCGGAGCAGGAAGCCGTGGCGCGCAGCCTTATGAGCC GCCTGCGCGAACTGGGATACGATGTGGTGACACGGCTTGAACCGGCCGGGCCGTTTTACATGGCCGAAGAGTATCATCAG CGTTTTGCAGAACGCACGGGGCGGGGACGCTGCCACATGCCCGTACCGCGCTTTGACATACCCGCCGGGGGCGGCGGTGG CGCGTTGCGGAAGTGA
Upstream 100 bases:
>100_bases GAGTGTCGCCCGCACGGCCCGGCCTGCATGCTGTCGGATGCGGCAAGGCATTGACCGTAAACGCAGAGGCCTTATTTATA GAAAGAACTGAGAGGCAATT
Downstream 100 bases:
>100_bases AAACAGTACGGCGGGCCGCAGTGCGGCCAGCCGTATATCTGAACAGAGCTTTGCCGGGGGATTCTTACAGTGCGCTGGCG GCTGCGGGGGAGAGGCGCAC
Product: bifunctional methionine sulfoxide reductase B/A protein
Products: NA
Alternate protein names: Peptide methionine sulfoxide reductase msrB; Peptide-methionine (R)-S-oxide reductase; Peptide methionine sulfoxide reductase msrA; Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSQRVFFLILTAWLLCGAFVPAAADCAAAGPVDAALPETAMKPSFPMPPLSGPEADIILRKATEAPYSGQYTNKREAGTY VCRQCGTPLYSSRDKFESGCGWPSFDDELPGAVRRQPDADGRRVEIVCANCGGHLGHVFAGEGFTAKNTRHCVNSLSMSF YPAGSPEEAQALARSSPQGCTATAIVAGGCFWGVEDAFRKMPGVCAAVSGYTGGRTPDPTYEAVCGGNTGHAEAVRVSFD PSVVSYEQILRRFFEIHDPTQLDRQGPDVGDQYRSAVFFLDAEQEAVARSLMSRLRELGYDVVTRLEPAGPFYMAEEYHQ RFAERTGRGRCHMPVPRFDIPAGGGGGALRK
Sequences:
>Translated_351_residues MSQRVFFLILTAWLLCGAFVPAAADCAAAGPVDAALPETAMKPSFPMPPLSGPEADIILRKATEAPYSGQYTNKREAGTY VCRQCGTPLYSSRDKFESGCGWPSFDDELPGAVRRQPDADGRRVEIVCANCGGHLGHVFAGEGFTAKNTRHCVNSLSMSF YPAGSPEEAQALARSSPQGCTATAIVAGGCFWGVEDAFRKMPGVCAAVSGYTGGRTPDPTYEAVCGGNTGHAEAVRVSFD PSVVSYEQILRRFFEIHDPTQLDRQGPDVGDQYRSAVFFLDAEQEAVARSLMSRLRELGYDVVTRLEPAGPFYMAEEYHQ RFAERTGRGRCHMPVPRFDIPAGGGGGALRK >Mature_350_residues SQRVFFLILTAWLLCGAFVPAAADCAAAGPVDAALPETAMKPSFPMPPLSGPEADIILRKATEAPYSGQYTNKREAGTYV CRQCGTPLYSSRDKFESGCGWPSFDDELPGAVRRQPDADGRRVEIVCANCGGHLGHVFAGEGFTAKNTRHCVNSLSMSFY PAGSPEEAQALARSSPQGCTATAIVAGGCFWGVEDAFRKMPGVCAAVSGYTGGRTPDPTYEAVCGGNTGHAEAVRVSFDP SVVSYEQILRRFFEIHDPTQLDRQGPDVGDQYRSAVFFLDAEQEAVARSLMSRLRELGYDVVTRLEPAGPFYMAEEYHQR FAERTGRGRCHMPVPRFDIPAGGGGGALRK
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0229
COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI208609995, Length=160, Percent_Identity=42.5, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI6912516, Length=160, Percent_Identity=42.5, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI301336164, Length=117, Percent_Identity=41.025641025641, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI301336162, Length=117, Percent_Identity=41.025641025641, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI73089054, Length=117, Percent_Identity=41.025641025641, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI37620216, Length=117, Percent_Identity=41.025641025641, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI117606353, Length=121, Percent_Identity=42.9752066115703, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI208609993, Length=141, Percent_Identity=39.0070921985816, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1790665, Length=184, Percent_Identity=46.7391304347826, Blast_Score=160, Evalue=9e-41, Organism=Escherichia coli, GI1788077, Length=125, Percent_Identity=36.8, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17533973, Length=139, Percent_Identity=33.0935251798561, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17553450, Length=102, Percent_Identity=39.2156862745098, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115532676, Length=102, Percent_Identity=39.2156862745098, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6319816, Length=117, Percent_Identity=50.4273504273504, Blast_Score=110, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6320881, Length=153, Percent_Identity=37.2549019607843, Blast_Score=107, Evalue=3e-24, Organism=Drosophila melanogaster, GI221378664, Length=133, Percent_Identity=36.8421052631579, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI221378662, Length=127, Percent_Identity=37.7952755905512, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24645799, Length=126, Percent_Identity=41.2698412698413, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI45553335, Length=139, Percent_Identity=38.1294964028777, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI21356369, Length=139, Percent_Identity=38.1294964028777, Blast_Score=85, Evalue=7e-17, Organism=Drosophila melanogaster, GI24645801, Length=137, Percent_Identity=37.956204379562, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24645804, Length=150, Percent_Identity=35.3333333333333, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24664627, Length=146, Percent_Identity=32.1917808219178, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24664631, Length=146, Percent_Identity=31.5068493150685, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI45553131, Length=139, Percent_Identity=31.6546762589928, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002579 - InterPro: IPR011057 - InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR; PF01641 SelR [H]
EC number: =1.8.4.12; =1.8.4.11 [H]
Molecular weight: Translated: 37843; Mature: 37712
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRVFFLILTAWLLCGAFVPAAADCAAAGPVDAALPETAMKPSFPMPPLSGPEADIILR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCCCCCCCCCCHHEEEE KATEAPYSGQYTNKREAGTYVCRQCGTPLYSSRDKFESGCGWPSFDDELPGAVRRQPDAD ECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCC GRRVEIVCANCGGHLGHVFAGEGFTAKNTRHCVNSLSMSFYPAGSPEEAQALARSSPQGC CCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHCCEECCCCCCHHHHHHHHCCCCCC TATAIVAGGCFWGVEDAFRKMPGVCAAVSGYTGGRTPDPTYEAVCGGNTGHAEAVRVSFD EEEHEECCCHHHCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHEECCCCCCCEEEEEECC PSVVSYEQILRRFFEIHDPTQLDRQGPDVGDQYRSAVFFLDAEQEAVARSLMSRLRELGY CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCEEEEEECHHHHHHHHHHHHHHHHCH DVVTRLEPAGPFYMAEEYHQRFAERTGRGRCHMPVPRFDIPAGGGGGALRK HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQRVFFLILTAWLLCGAFVPAAADCAAAGPVDAALPETAMKPSFPMPPLSGPEADIILR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCCCCCCCCCCHHEEEE KATEAPYSGQYTNKREAGTYVCRQCGTPLYSSRDKFESGCGWPSFDDELPGAVRRQPDAD ECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCCCC GRRVEIVCANCGGHLGHVFAGEGFTAKNTRHCVNSLSMSFYPAGSPEEAQALARSSPQGC CCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHCCEECCCCCCHHHHHHHHCCCCCC TATAIVAGGCFWGVEDAFRKMPGVCAAVSGYTGGRTPDPTYEAVCGGNTGHAEAVRVSFD EEEHEECCCHHHCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHEECCCCCCCEEEEEECC PSVVSYEQILRRFFEIHDPTQLDRQGPDVGDQYRSAVFFLDAEQEAVARSLMSRLRELGY CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHCCEEEEEECHHHHHHHHHHHHHHHHCH DVVTRLEPAGPFYMAEEYHQRFAERTGRGRCHMPVPRFDIPAGGGGGALRK HHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]