Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220904852

Identifier: 220904852

GI number: 220904852

Start: 1907462

End: 1907737

Strand: Reverse

Name: 220904852

Synonym: Ddes_1586

Alternate gene names: NA

Gene position: 1907737-1907462 (Counterclockwise)

Preceding gene: 220904853

Following gene: 220904851

Centisome position: 66.39

GC content: 51.09

Gene sequence:

>276_bases
ATGTGCGTTACACTTATAGGCGGTATGGACAGGCTGCACAAAGATTACATTGCCGCAGCCAAGGAAAAGGGGCATTCTCT
TAAATGCATCAGCCGTAATGAGCGTAATTTTACCGACAAGATCGGCAATCCCGATGCCATGATCGTTTTTACCAACAAGA
TTTCGCATGAAGCCAAGCGCAAGGCCGTGCAGGTGGCCCGTTCGCGCAATATTCCCCTGCAGATGGTTCACTCATGCGGC
GTGTCTTCCCTGCGAGAATGTCTGCGTAGCTCCTAG

Upstream 100 bases:

>100_bases
ACTTCTTGACTTTGAAATTCAATTTCAATTATAACCAGATTACGCGATTCACCCCAACAGCGGTTGCCGCTCAGGCGGTA
ACATGACAAGGAGCGAAAGT

Downstream 100 bases:

>100_bases
TCTGAACCTGACAAACTCCTATGGCCGCCAGAGCAGGCAGCTCAAACCGGCGACATTGCGGACCATCAAATGGCTGAATG
GTTTTCGAGCAGGGCTTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MCVTLIGGMDRLHKDYIAAAKEKGHSLKCISRNERNFTDKIGNPDAMIVFTNKISHEAKRKAVQVARSRNIPLQMVHSCG
VSSLRECLRSS

Sequences:

>Translated_91_residues
MCVTLIGGMDRLHKDYIAAAKEKGHSLKCISRNERNFTDKIGNPDAMIVFTNKISHEAKRKAVQVARSRNIPLQMVHSCG
VSSLRECLRSS
>Mature_91_residues
MCVTLIGGMDRLHKDYIAAAKEKGHSLKCISRNERNFTDKIGNPDAMIVFTNKISHEAKRKAVQVARSRNIPLQMVHSCG
VSSLRECLRSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10170; Mature: 10170

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVTLIGGMDRLHKDYIAAAKEKGHSLKCISRNERNFTDKIGNPDAMIVFTNKISHEAKR
CEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHH
KAVQVARSRNIPLQMVHSCGVSSLRECLRSS
HHHHHHHCCCCCHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MCVTLIGGMDRLHKDYIAAAKEKGHSLKCISRNERNFTDKIGNPDAMIVFTNKISHEAKR
CEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECCHHHHHHH
KAVQVARSRNIPLQMVHSCGVSSLRECLRSS
HHHHHHHCCCCCHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA