| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is feoB1 [H]
Identifier: 220904851
GI number: 220904851
Start: 1904627
End: 1906798
Strand: Reverse
Name: feoB1 [H]
Synonym: Ddes_1585
Alternate gene names: 220904851
Gene position: 1906798-1904627 (Counterclockwise)
Preceding gene: 220904852
Following gene: 220904850
Centisome position: 66.36
GC content: 59.44
Gene sequence:
>2172_bases TTGCGAATTGCCCTGGCGGGCAACCCCAACTGCGGCAAGACCACGGTGTTTAACGGCTATACCGGGGCGCGGCAGCATGT GGGCAACTATCCGGGTGTCACGGTTGACAAGAAGGAAGGTCATATCAACGTGGACGGCACGCACGTCACGGTGGTGGACC TGCCCGGAACCTATTCGCTGACCGCCTATTCGCAGGAAGAGCGCGTGGCCCGGCAGGAACTGGCCGGCGACAATGTACAG GCAGTTATAGACATTGTGGACGCCTCTGCCCTGGAGCGCAACCTGCTGCTTACTGTGCAGATGCTTGAAATGGGCACGCC GCTGGTGCTCTGCTGCAACATGATGGACGAAGCGCGCGCTTCCGGGGTGCATATCGACATGGAGCGCCTGGGAACCCTTT TGGGGGTTCCTGTATTGCCTATGGTGGCGCGTACCGGCGAGGGGCTTAAAGAAGGCATGAAGGCCGCCGTTGAGCTTGCC AGAAACGGCAAGCGCCAACCTATGCGTATTTCTTACGGCATGGAGCTGGATGAGGCCCTGCTTGAACTTGAAAAGCGCAT CACTGCCGCAGATCTGCTGACTGACCGCTACCTGCCCAGCTGGGTAGCCCTCAAACTGCTGGAGGGTGATGATGTCATCA TGGCCGAAGTCCGCGCGGCCGATGCCAAAACGGCCGATGAGCTTGCGGCCTTGTGCAGAAAAACAGCGGATCACGTGCGC GCCACGCTTAACGCCAACCTTGAATCACTCATTACAGATCACCGCTACGGCTACATCCGCAGCATCCTGCGCGACGGCGT TTTTCATCAGGATCCCGGCAAGGACCGCCTGGCTCTTTCCGACAAGCTGGACAAGGTGCTTACTAATGCCCTGTTCGGCC CGCTGCTCATGATCGGAGTGCTTTACCTCATGTTTTACGTGACGTTTGAGGTGGGCGCGTATCCACAGGGATGGGTTGAA GACGGTTTTGCCTGGCTTGGCGAATTTTTGGGCGAGGTCATGCCGGAAGGCCTGGCACGCTCTCTGGTGGTGGACGGCAT CATTGCCGGTGTGGGCGGGGTCGTAAGCTTTGTGCCGCTGATCCTTATCATGTTCGCCCTGATTTCCTTTATGGAAGACA GCGGCTACATGGCTCGCGTGGCCTATATGATGGACCGTATTTTCCGCTTTTTCGGCCTGCACGGTGCTTCGGTCATGCCT TACATCATTTCCGGCGGCATTGCGGGCGGCTGCGCCATTCCCGGTGCCATGGCCACCCGTACCCTGCGCAGCCCCAAGGA AAAACTGGCGACCCTGCTGACCCTGCCCTACATGTCCTGCGGAGCCAAGTTGCCTGTCTTTTTGCTGCTGGCGGGAACAT TCTTTCCCGAGCAGGCGGCCACGGTCATGTTTTTGATCATGCTGGCCGGATGGGTCATGGCCCTGCTCGTGGCGCGCCTG CTGCGCTCGTCCATCGTCAAGGGCGAAGCAACGCCATTTGTTATGGAACTGCCCCCCTACCGTATGCCCACCCTGTTCAG CCTGTTGCTGCACTGCTGGGAGCGCGCCTGGATGTATCTCAAGAAGGCCGGTACGGTGCTGGTGGCCATATCCATCATCA TCTGGGCGGGCATGACATTTCCCGAACTGCCCGAAGACATGGCCGCGCCTTTTGAACAGAAGATAGAGCAGATTGAAAGC CAGATTGCCGCTCTGCCTGAAGGAGCTGATGAGCGCACCGCCCTTGAGGAAGAGCTGGCCGGAGTGCGTGACGAACTGGG TGAAGAAGAACTGGCCTATTCCGTTGCCGGTCGCCTGGGCAAGGCTGTGGAGCCAGCTACCCGGCCTGTGGGCTTCGACT GGCGTACAGACATTGCCCTGCTTGCGGGCATTGCCGCCAAAGAGGCCATTGTGTCTACCCTGGGAACCGCCTACGCCATT GGTGAACAGGACCCCGAAGACGCCGCTCCTCTGGCCGAACGGCTGAAGAGCGATGCCAACTGGTCCAAGGCCACGGCCCT TTCGTTGATGCTTTTTGTGCTCATGTACTCTCCCTGCTTTGTGGCGCTTGTGGTCATCAAGCAGGAGGCGGGGAGCTGGG GCTGGCTGGTATTCAGCGTTGTCTTCAATACGGCGGTGGCCTATGTGGTGGCCATGGCGGCCTACCAGATCGGCCGGTCC GTCTGGGGATAG
Upstream 100 bases:
>100_bases TTCCGGCAATGGCGTAAGCGGTCACGGGCATGCGCACGGCCACGAGCACGAGCATGGTCACAAAGGCGGCCACGCCCACA GACATGAGCACGGCCACGGC
Downstream 100 bases:
>100_bases CGTGATATAAGGCCTGCCCGCTCCTGCCGGGGTAGAGGAAGACTCCGATGAATGCCCGTGCCGCGCCTTGACAAAAGGCT TGCGGCACGGGCATTCTTCA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 723; Mature: 723
Protein sequence:
>723_residues MRIALAGNPNCGKTTVFNGYTGARQHVGNYPGVTVDKKEGHINVDGTHVTVVDLPGTYSLTAYSQEERVARQELAGDNVQ AVIDIVDASALERNLLLTVQMLEMGTPLVLCCNMMDEARASGVHIDMERLGTLLGVPVLPMVARTGEGLKEGMKAAVELA RNGKRQPMRISYGMELDEALLELEKRITAADLLTDRYLPSWVALKLLEGDDVIMAEVRAADAKTADELAALCRKTADHVR ATLNANLESLITDHRYGYIRSILRDGVFHQDPGKDRLALSDKLDKVLTNALFGPLLMIGVLYLMFYVTFEVGAYPQGWVE DGFAWLGEFLGEVMPEGLARSLVVDGIIAGVGGVVSFVPLILIMFALISFMEDSGYMARVAYMMDRIFRFFGLHGASVMP YIISGGIAGGCAIPGAMATRTLRSPKEKLATLLTLPYMSCGAKLPVFLLLAGTFFPEQAATVMFLIMLAGWVMALLVARL LRSSIVKGEATPFVMELPPYRMPTLFSLLLHCWERAWMYLKKAGTVLVAISIIIWAGMTFPELPEDMAAPFEQKIEQIES QIAALPEGADERTALEEELAGVRDELGEEELAYSVAGRLGKAVEPATRPVGFDWRTDIALLAGIAAKEAIVSTLGTAYAI GEQDPEDAAPLAERLKSDANWSKATALSLMLFVLMYSPCFVALVVIKQEAGSWGWLVFSVVFNTAVAYVVAMAAYQIGRS VWG
Sequences:
>Translated_723_residues MRIALAGNPNCGKTTVFNGYTGARQHVGNYPGVTVDKKEGHINVDGTHVTVVDLPGTYSLTAYSQEERVARQELAGDNVQ AVIDIVDASALERNLLLTVQMLEMGTPLVLCCNMMDEARASGVHIDMERLGTLLGVPVLPMVARTGEGLKEGMKAAVELA RNGKRQPMRISYGMELDEALLELEKRITAADLLTDRYLPSWVALKLLEGDDVIMAEVRAADAKTADELAALCRKTADHVR ATLNANLESLITDHRYGYIRSILRDGVFHQDPGKDRLALSDKLDKVLTNALFGPLLMIGVLYLMFYVTFEVGAYPQGWVE DGFAWLGEFLGEVMPEGLARSLVVDGIIAGVGGVVSFVPLILIMFALISFMEDSGYMARVAYMMDRIFRFFGLHGASVMP YIISGGIAGGCAIPGAMATRTLRSPKEKLATLLTLPYMSCGAKLPVFLLLAGTFFPEQAATVMFLIMLAGWVMALLVARL LRSSIVKGEATPFVMELPPYRMPTLFSLLLHCWERAWMYLKKAGTVLVAISIIIWAGMTFPELPEDMAAPFEQKIEQIES QIAALPEGADERTALEEELAGVRDELGEEELAYSVAGRLGKAVEPATRPVGFDWRTDIALLAGIAAKEAIVSTLGTAYAI GEQDPEDAAPLAERLKSDANWSKATALSLMLFVLMYSPCFVALVVIKQEAGSWGWLVFSVVFNTAVAYVVAMAAYQIGRS VWG >Mature_723_residues MRIALAGNPNCGKTTVFNGYTGARQHVGNYPGVTVDKKEGHINVDGTHVTVVDLPGTYSLTAYSQEERVARQELAGDNVQ AVIDIVDASALERNLLLTVQMLEMGTPLVLCCNMMDEARASGVHIDMERLGTLLGVPVLPMVARTGEGLKEGMKAAVELA RNGKRQPMRISYGMELDEALLELEKRITAADLLTDRYLPSWVALKLLEGDDVIMAEVRAADAKTADELAALCRKTADHVR ATLNANLESLITDHRYGYIRSILRDGVFHQDPGKDRLALSDKLDKVLTNALFGPLLMIGVLYLMFYVTFEVGAYPQGWVE DGFAWLGEFLGEVMPEGLARSLVVDGIIAGVGGVVSFVPLILIMFALISFMEDSGYMARVAYMMDRIFRFFGLHGASVMP YIISGGIAGGCAIPGAMATRTLRSPKEKLATLLTLPYMSCGAKLPVFLLLAGTFFPEQAATVMFLIMLAGWVMALLVARL LRSSIVKGEATPFVMELPPYRMPTLFSLLLHCWERAWMYLKKAGTVLVAISIIIWAGMTFPELPEDMAAPFEQKIEQIES QIAALPEGADERTALEEELAGVRDELGEEELAYSVAGRLGKAVEPATRPVGFDWRTDIALLAGIAAKEAIVSTLGTAYAI GEQDPEDAAPLAERLKSDANWSKATALSLMLFVLMYSPCFVALVVIKQEAGSWGWLVFSVVFNTAVAYVVAMAAYQIGRS VWG
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=779, Percent_Identity=32.2207958921694, Blast_Score=339, Evalue=3e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007167 - InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF04023 FeoA; PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 78717; Mature: 78717
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIALAGNPNCGKTTVFNGYTGARQHVGNYPGVTVDKKEGHINVDGTHVTVVDLPGTYSL CEEEECCCCCCCCCEEECCCCHHHHHCCCCCCCEEECCCCEEEECCCEEEEEECCCCEEE TAYSQEERVARQELAGDNVQAVIDIVDASALERNLLLTVQMLEMGTPLVLCCNMMDEARA EECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SGVHIDMERLGTLLGVPVLPMVARTGEGLKEGMKAAVELARNGKRQPMRISYGMELDEAL CCCEEEHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHH LELEKRITAADLLTDRYLPSWVALKLLEGDDVIMAEVRAADAKTADELAALCRKTADHVR HHHHHHHHHHHHHHHHCCCHHHHHEEECCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHH ATLNANLESLITDHRYGYIRSILRDGVFHQDPGKDRLALSDKLDKVLTNALFGPLLMIGV HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYLMFYVTFEVGAYPQGWVEDGFAWLGEFLGEVMPEGLARSLVVDGIIAGVGGVVSFVPL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILIMFALISFMEDSGYMARVAYMMDRIFRFFGLHGASVMPYIISGGIAGGCAIPGAMATR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHH TLRSPKEKLATLLTLPYMSCGAKLPVFLLLAGTFFPEQAATVMFLIMLAGWVMALLVARL HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRSSIVKGEATPFVMELPPYRMPTLFSLLLHCWERAWMYLKKAGTVLVAISIIIWAGMTF HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCC PELPEDMAAPFEQKIEQIESQIAALPEGADERTALEEELAGVRDELGEEELAYSVAGRLG CCCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC KAVEPATRPVGFDWRTDIALLAGIAAKEAIVSTLGTAYAIGEQDPEDAAPLAERLKSDAN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC WSKATALSLMLFVLMYSPCFVALVVIKQEAGSWGWLVFSVVFNTAVAYVVAMAAYQIGRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWG CCC >Mature Secondary Structure MRIALAGNPNCGKTTVFNGYTGARQHVGNYPGVTVDKKEGHINVDGTHVTVVDLPGTYSL CEEEECCCCCCCCCEEECCCCHHHHHCCCCCCCEEECCCCEEEECCCEEEEEECCCCEEE TAYSQEERVARQELAGDNVQAVIDIVDASALERNLLLTVQMLEMGTPLVLCCNMMDEARA EECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SGVHIDMERLGTLLGVPVLPMVARTGEGLKEGMKAAVELARNGKRQPMRISYGMELDEAL CCCEEEHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHH LELEKRITAADLLTDRYLPSWVALKLLEGDDVIMAEVRAADAKTADELAALCRKTADHVR HHHHHHHHHHHHHHHHCCCHHHHHEEECCCCEEEHHHHHHCCCCHHHHHHHHHHHHHHHH ATLNANLESLITDHRYGYIRSILRDGVFHQDPGKDRLALSDKLDKVLTNALFGPLLMIGV HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LYLMFYVTFEVGAYPQGWVEDGFAWLGEFLGEVMPEGLARSLVVDGIIAGVGGVVSFVPL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILIMFALISFMEDSGYMARVAYMMDRIFRFFGLHGASVMPYIISGGIAGGCAIPGAMATR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHH TLRSPKEKLATLLTLPYMSCGAKLPVFLLLAGTFFPEQAATVMFLIMLAGWVMALLVARL HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LRSSIVKGEATPFVMELPPYRMPTLFSLLLHCWERAWMYLKKAGTVLVAISIIIWAGMTF HHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCC PELPEDMAAPFEQKIEQIESQIAALPEGADERTALEEELAGVRDELGEEELAYSVAGRLG CCCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC KAVEPATRPVGFDWRTDIALLAGIAAKEAIVSTLGTAYAIGEQDPEDAAPLAERLKSDAN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC WSKATALSLMLFVLMYSPCFVALVVIKQEAGSWGWLVFSVVFNTAVAYVVAMAAYQIGRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VWG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12949112 [H]