Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904584

Identifier: 220904584

GI number: 220904584

Start: 1563912

End: 1565927

Strand: Direct

Name: 220904584

Synonym: Ddes_1316

Alternate gene names: NA

Gene position: 1563912-1565927 (Clockwise)

Preceding gene: 220904583

Following gene: 220904585

Centisome position: 54.43

GC content: 56.0

Gene sequence:

>2016_bases
ATGCGCCCCACCACCATCATATCTTGCCGTCATTGTATGTTCGGTGCTCTGTCCGGCATAGCGGCCTGCTCTCTTGCACT
GTTTTTTTTTATGGTTGCCGGAAATATCTTTGCTGCATCACATGTACAGGCTGCGCCCCTGTTACTGGAAGGTAAAAAAA
CGCTTTTCCAGCGGGTGGTCAGTCACCCAGGGGCACGCCTCATGGCCGGCCCTGCGGCAGACGCCGCAGTGGTAAAGGAA
AACGTAACACCTTTTACCGTTTTTTACGTTTACGCCCGCAATGAGGGCTGGCTTCAGGTCGGGGCAGGCGCCGCCGCCCC
CGAAGGCTGGCTGGAAACGACCAGGGCAACAGACTGGAACCAGTCCCTCACCCTGCTCTTCACGCCGCGCACAGGCCGCG
ACCCGGTGCTTTTCTTCAAAACAGAAAACGCGCTGAATGACGTCTGCGCCGCTCCGGATATGGACGCGCGTCTGGACAAA
CTCAATGCCGAATCTGCCAGTCTGCTGCAAGGCGGCAAAATTCCGCCAAACGATTTTCCCGTGCTGGCCAGCGAACCTGC
GGATGCAACCGGGGCGGTTTCAGAAAAGCGGTTTTATCTCATGCCCATTCTGGACATGAAGGACCCCTTTGACGGGGTAA
AGTTTCTGCGCGTGGCTTCCATCGACCCCGGCGGCATGCCGGGCAGCCAGAGTGGCAAAAGCGGCCCGCCCAAAACAGGC
ATAGCCCTTGTCATAGATACCACAATTTCCATGAAGCCATACATAGATCAAAGCCTTAACGTGGTGCGCCAGATATACGA
CAAAATTGAACAGGACAAGCTGGAAGACAACGTGGGTTTTGCTGTGGTTGCTTTTCGCAACAGCACAAAAGCCACTCCAG
GTCTAAGCTATGTTGCTGAAGTTGTAAGCGATTTCACTACGGCAAAAAACCGTAAAAGCCTTGAAGAAAAGCTCTCCAAG
GTGCAGGAAGCCACCGTCTCCAGCCACGACTTCAATGAAGACTCCCTGGCAGGCGTGTACAAGGCCGTAGAGACCCTCAA
CTGGGGTGATTATTCCTCGCGGCTCATCCTGCTCATTACCGATGCCGGTCCTCTCAAAAGCACGGACAAATACGCCTCTG
TCAGTATGGGGCCCAGTGAGCTCAATGATTTTGCGCGGCAAAAAGGCATCTGGATATCCATCCTGCACATCAAAAGCCCC
GGCGGAGCCAAAAACCACGCCTACGCTGAACAGAATTACCGCGCCCTGAGCAAACTCTCGGGCAATCGCTCAAACTATCA
GGTGGTTGCCGCGCCCACAGCCGCAGCCGGGGCCAAGCAGTTTGCTGAGGTCGCCAAAGTGCTGGCCACAGGCATGGTGG
ATATGGTCAAAAACACTGCCTTGGGCAAAGTCATGACCAAACCAAAAGACGAAAAACCGCAAAAACTTACTGCCGAGGAA
GAAGCCGCCCGTCTTGCCGCCACCCTGGGCTATGCCATGCAACTGGAATATCTTGGCAAGGCGCGTGAAAATCAGGCGCC
CAGCGTCGTCAGTTCGTGGATTGCCGATATGGATCTCAAACGTCTTGCCAGGAGCGAGCAAAGCCCCAGCGTTGAGGTGG
CCGTACTGCTGACCAAAAACCAGCTCAATGACCTGAGCGCCCAGATCAAGGCTGTCATTGACAGTGCGGAGCGCACCAAA
AAAACCGACTCGCGCGATTTCTTTCAGGGAGTGCTCTCTGCCTCCACGCGCATGGCCCGCGATCCCAATATGCCGACGCA
GGGGAAAAATCTGGCGCAACTGGGTGTGCTGGCGGAATTTCTGGATGGGCTGCCCTACAAGAGCGACATCATGCTGCTGC
GCGAAGAAGACTGGTATCGCATGAGCGTGGGCGAGCAGACGGCCTTTATCAACAGGCTCAAGTCACGCCTGGCCCGCTAT
GAAGAGTACGACCGCGACCGCGCCAACTGGGAAAGCTTCGGCCAGCCCAATCCCGGCGACTGGGTATACCGCGTACCTTT
GAGCATGCTGCCCTAG

Upstream 100 bases:

>100_bases
TCCGGCGCAGGTAGCCATTTTACCGGCAGATCCGGTGATATTCAGGCTGCAACCGCGCCGATGCTGTCAATATAAAACGG
AGTCCGGGAGGATACCCGCC

Downstream 100 bases:

>100_bases
ACTGAGTCTGACAAGGCCTTCATATGGATAATCAGGTTTTTTCCCTGCGGCAGATAAGCAAAAGCCGCCCCGGCGCTGAA
GGCTTCAGCCTGCATGTGGA

Product: PpkA-like protein

Products: NA

Alternate protein names: PpkA-Related Protein; Serine/Threonine Protein Kinase; Serine/Threonine Protein Kinase PpkA; Von Willebrand Factor Type A Domain-Containing Protein; Protein Kinase; Exported Protein

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVVSHPGARLMAGPAADAAVVKE
NVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWNQSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDK
LNAESASLLQGGKIPPNDFPVLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG
IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAEVVSDFTTAKNRKSLEEKLSK
VQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLITDAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSP
GGAKNHAYAEQNYRALSKLSGNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE
EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKNQLNDLSAQIKAVIDSAERTK
KTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEFLDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARY
EEYDRDRANWESFGQPNPGDWVYRVPLSMLP

Sequences:

>Translated_671_residues
MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVVSHPGARLMAGPAADAAVVKE
NVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWNQSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDK
LNAESASLLQGGKIPPNDFPVLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG
IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAEVVSDFTTAKNRKSLEEKLSK
VQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLITDAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSP
GGAKNHAYAEQNYRALSKLSGNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE
EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKNQLNDLSAQIKAVIDSAERTK
KTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEFLDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARY
EEYDRDRANWESFGQPNPGDWVYRVPLSMLP
>Mature_671_residues
MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVVSHPGARLMAGPAADAAVVKE
NVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWNQSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDK
LNAESASLLQGGKIPPNDFPVLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG
IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAEVVSDFTTAKNRKSLEEKLSK
VQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLITDAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSP
GGAKNHAYAEQNYRALSKLSGNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE
EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKNQLNDLSAQIKAVIDSAERTK
KTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEFLDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARY
EEYDRDRANWESFGQPNPGDWVYRVPLSMLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73314; Mature: 73314

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCHHHHHHHHH
SHPGARLMAGPAADAAVVKENVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWN
HCCCCEEEECCCCCHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCCCHHHHHCCCCCCC
QSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDKLNAESASLLQGGKIPPNDFP
CCEEEEECCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCC
VLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG
EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAE
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH
VVSDFTTAKNRKSLEEKLSKVQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLIT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEE
DAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSPGGAKNHAYAEQNYRALSKLS
CCCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHC
GNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
QLNDLSAQIKAVIDSAERTKKTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARYEEYDRDRANWESFGQPNPGD
HCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC
WVYRVPLSMLP
EEEECCHHCCC
>Mature Secondary Structure
MRPTTIISCRHCMFGALSGIAACSLALFFFMVAGNIFAASHVQAAPLLLEGKKTLFQRVV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCHHHHHHHHH
SHPGARLMAGPAADAAVVKENVTPFTVFYVYARNEGWLQVGAGAAAPEGWLETTRATDWN
HCCCCEEEECCCCCHHHHHCCCCEEEEEEEEECCCCCEEECCCCCCCCHHHHHCCCCCCC
QSLTLLFTPRTGRDPVLFFKTENALNDVCAAPDMDARLDKLNAESASLLQGGKIPPNDFP
CCEEEEECCCCCCCCEEEEECCCHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCC
VLASEPADATGAVSEKRFYLMPILDMKDPFDGVKFLRVASIDPGGMPGSQSGKSGPPKTG
EEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
IALVIDTTISMKPYIDQSLNVVRQIYDKIEQDKLEDNVGFAVVAFRNSTKATPGLSYVAE
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH
VVSDFTTAKNRKSLEEKLSKVQEATVSSHDFNEDSLAGVYKAVETLNWGDYSSRLILLIT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEE
DAGPLKSTDKYASVSMGPSELNDFARQKGIWISILHIKSPGGAKNHAYAEQNYRALSKLS
CCCCCCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHC
GNRSNYQVVAAPTAAAGAKQFAEVAKVLATGMVDMVKNTALGKVMTKPKDEKPQKLTAEE
CCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
EAARLAATLGYAMQLEYLGKARENQAPSVVSSWIADMDLKRLARSEQSPSVEVAVLLTKN
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
QLNDLSAQIKAVIDSAERTKKTDSRDFFQGVLSASTRMARDPNMPTQGKNLAQLGVLAEF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LDGLPYKSDIMLLREEDWYRMSVGEQTAFINRLKSRLARYEEYDRDRANWESFGQPNPGD
HCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC
WVYRVPLSMLP
EEEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA