| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904550
Identifier: 220904550
GI number: 220904550
Start: 1510057
End: 1510905
Strand: Direct
Name: 220904550
Synonym: Ddes_1281
Alternate gene names: NA
Gene position: 1510057-1510905 (Clockwise)
Preceding gene: 220904549
Following gene: 220904554
Centisome position: 52.55
GC content: 58.54
Gene sequence:
>849_bases ATGACCAGTGTCACGCCGCAGCCTGTGCTGCGCATGGGCCGCATAGGCTATCTCAATGTGCTGCCCATCTATCATCCCCT GGAAGCGGGCCTGTTGCCCCACGATTTTGAACTGGTATCCGGGCCGCCAGCCCTGCTCAACAACATGATGGCTCGCGGCG AACTGCATGTTTCGTCCACATCCTGCTTTGAATACGCCTGCCGCCCCGAACGCTACTATCTGGTGGAAGACCTTTCCATT GGCTCACGCGGGCCAGTCATGAGCGTGCTGCTGCTCTCCCGCGTGCCTTTAGACCAGCTGAACGGTGCAGAAATCCTCAT CAGCGGAGAAACGCATACTTCTGTGGCCCTGCTGCGGCTGCTCATGCGCGACCGCTACAAGCTTGATGTGAGCTATACCA CAGGACAGGTCACCCCTGCCGTGCGCAGCAGTGATCCGCCCACTGCTTTTCTGGCCATTGGGGACGAGGCCTTGCGGTTG CGCAACCATCCGGACTATCCCTATCGCCTTGACCTGGCCGAAGCATGGCGTGACTGGACAGGTCTGCCTTTTATTTTCGG CCTGTGGGTGGTAAGCCGCGCAGCGGCAGATGCAGGGCTGTTTACCAGCGATCCGGGCGAACTGCTGCGGCAGGGACGAA GCTGGAGCTTTGCCAATATGGATGTGATTCTTGACCTGACAGCCCACGGCTGCCCGCTGAACCGGGACGAACTGGCCTTT TACTACAGCAAGGGACTTGTCTACAGCCTGGGCGAAGAAGAACAACGCGGCCTTATGCTCTTTTATGAAAAACTGGCTGC CGCCGGGATAATTCCCTCTGCACCGCCGCTGGAGTTTTTCAGGCTATAG
Upstream 100 bases:
>100_bases TGCCCGGGCGTTTTGCCCATTGCAGGCAAACCTTTCCGCGCCGGATTTTGCGGCGTTTGCTCGCCAGGCAGACGCCGCTC ACTTCAGCAAGGGTATCACC
Downstream 100 bases:
>100_bases CTTGGCAGAACATCTACTGCCCCGGCGGAGGAACCACAGTCAGATCCGATAACTGCCCGACCTTTCAAGACTTACGTTTT TTGCCCGCACAGACGCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTSVTPQPVLRMGRIGYLNVLPIYHPLEAGLLPHDFELVSGPPALLNNMMARGELHVSSTSCFEYACRPERYYLVEDLSI GSRGPVMSVLLLSRVPLDQLNGAEILISGETHTSVALLRLLMRDRYKLDVSYTTGQVTPAVRSSDPPTAFLAIGDEALRL RNHPDYPYRLDLAEAWRDWTGLPFIFGLWVVSRAAADAGLFTSDPGELLRQGRSWSFANMDVILDLTAHGCPLNRDELAF YYSKGLVYSLGEEEQRGLMLFYEKLAAAGIIPSAPPLEFFRL
Sequences:
>Translated_282_residues MTSVTPQPVLRMGRIGYLNVLPIYHPLEAGLLPHDFELVSGPPALLNNMMARGELHVSSTSCFEYACRPERYYLVEDLSI GSRGPVMSVLLLSRVPLDQLNGAEILISGETHTSVALLRLLMRDRYKLDVSYTTGQVTPAVRSSDPPTAFLAIGDEALRL RNHPDYPYRLDLAEAWRDWTGLPFIFGLWVVSRAAADAGLFTSDPGELLRQGRSWSFANMDVILDLTAHGCPLNRDELAF YYSKGLVYSLGEEEQRGLMLFYEKLAAAGIIPSAPPLEFFRL >Mature_281_residues TSVTPQPVLRMGRIGYLNVLPIYHPLEAGLLPHDFELVSGPPALLNNMMARGELHVSSTSCFEYACRPERYYLVEDLSIG SRGPVMSVLLLSRVPLDQLNGAEILISGETHTSVALLRLLMRDRYKLDVSYTTGQVTPAVRSSDPPTAFLAIGDEALRLR NHPDYPYRLDLAEAWRDWTGLPFIFGLWVVSRAAADAGLFTSDPGELLRQGRSWSFANMDVILDLTAHGCPLNRDELAFY YSKGLVYSLGEEEQRGLMLFYEKLAAAGIIPSAPPLEFFRL
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31421; Mature: 31289
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVTPQPVLRMGRIGYLNVLPIYHPLEAGLLPHDFELVSGPPALLNNMMARGELHVSST CCCCCCHHHHHHCCCCEEEEECCCCCHHCCCCCCCCEECCCCHHHHHHHHHCCEEEECCC SCFEYACRPERYYLVEDLSIGSRGPVMSVLLLSRVPLDQLNGAEILISGETHTSVALLRL HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHH LMRDRYKLDVSYTTGQVTPAVRSSDPPTAFLAIGDEALRLRNHPDYPYRLDLAEAWRDWT HHHCCEEEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCEEEEHHHHHCCCC GLPFIFGLWVVSRAAADAGLFTSDPGELLRQGRSWSFANMDVILDLTAHGCPLNRDELAF CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEECCEEEEEEECCCCCCCHHHEEE YYSKGLVYSLGEEEQRGLMLFYEKLAAAGIIPSAPPLEFFRL EEECCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCC >Mature Secondary Structure TSVTPQPVLRMGRIGYLNVLPIYHPLEAGLLPHDFELVSGPPALLNNMMARGELHVSST CCCCCHHHHHHCCCCEEEEECCCCCHHCCCCCCCCEECCCCHHHHHHHHHCCEEEECCC SCFEYACRPERYYLVEDLSIGSRGPVMSVLLLSRVPLDQLNGAEILISGETHTSVALLRL HHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHH LMRDRYKLDVSYTTGQVTPAVRSSDPPTAFLAIGDEALRLRNHPDYPYRLDLAEAWRDWT HHHCCEEEEEEEECCCCCCCCCCCCCCEEEEEECHHHHHHCCCCCCCEEEEHHHHHCCCC GLPFIFGLWVVSRAAADAGLFTSDPGELLRQGRSWSFANMDVILDLTAHGCPLNRDELAF CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEECCEEEEEEECCCCCCCHHHEEE YYSKGLVYSLGEEEQRGLMLFYEKLAAAGIIPSAPPLEFFRL EEECCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA