| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is fbp [H]
Identifier: 220904467
GI number: 220904467
Start: 1408854
End: 1409867
Strand: Direct
Name: fbp [H]
Synonym: Ddes_1197
Alternate gene names: 220904467
Gene position: 1408854-1409867 (Clockwise)
Preceding gene: 220904466
Following gene: 220904468
Centisome position: 49.03
GC content: 52.86
Gene sequence:
>1014_bases ATGGCTGATATCACGGTCACGGAACATCTGCTGCTGCATCAAAAGCGCACCCCGCAGGCCACGGGGCAATTTACCGGCTT GCTGTACGACCTTATCCTTTCCGGCAAAAGTATCTCCCGCCGCATTAACAAGGCTGGGTTGTTGGATATTCTCGGCGGTA CAGGCGAGGTTAACGTTCAAGGCGAGAATGTTCAGAAAATGGATACAATCGCCAATCGCATCATGCTCTACCGCATGGAG CGGTGTGGCGCCCTGTGTGCCATGAGTTCGGAAGAAGAGGCCGACCTGATACGCGTCAGCCCGGAATTTCCCCGTGGCGA CTATATCTTGATTTTTGATCCGCTGGACGGTTCTTCCAACATTGATGTTAACATCAATGTTGGAACAATTTTTTCGATTT TACGTCGTCCCGATGGGCATTCAGGCGAAGTGACGCTGGATGAGGTGCTGCAGCCGGGCAACAGGCAAGTGGCGGCAGGT TATATTTTATATGGTCCCTCCACCATGCTTGTACTCAGCACGGGGCAAGGAGTTCATGGCTTCACCCTTGACCCTGGAGT GGGAGAATTTTTGCTTTCCCATCCCAACATGTGCATCCCCGAGCAGGGGTACATCTATTCGGTAAATGAGGGGAACTGGA AGAATTGGGATGCCCCTGCCCGCGAGGCTGTAAACTGGTTTCACGGCTGTGAAACTTCAGACGGAAAGCCGTATTCCTCC CGGTATGTCGGTGCTCTTGTTGCGGATTTTCATCGCACGTTGATCAACGGCGGCATTTATATGTACCCATCGGATGCCAA AAAACCCAACGGCAAACTGCGTCTTATGTGCGAGGCTGCCCCCTTGGCTTTTCTTGCGGAGCAGGCCGGGGGCAAGGCAA GTGACGGCAGGGGCCGCATTCTTGAAAGGGTTCCCGAGCACTTGCATGCACGTACGCCTTTATTCATCGGCTCCGCCAAA GATGTGGAAGCTGTTGAAAACATTTATGCCAAGTATGCCGGTTTGATAGCCTGA
Upstream 100 bases:
>100_bases TTCGGGCCACGGAATTGACGCATATTATGAAGCTTGCGCCGCCCCGGGGCGGCGCAAGCCTTTAGGTATTCGGAACATCT GTTTTTTGCAGGAGGCCTGC
Downstream 100 bases:
>100_bases CAGCAAATCGTACGTAATTCTGGGGCCGCGTTCGGCGCGGCTCCTGTTTTTTGTTGAAAGAGAGACCATATGCTTTGCCT TGGCATTGAAAGTTCCTGTG
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MADITVTEHLLLHQKRTPQATGQFTGLLYDLILSGKSISRRINKAGLLDILGGTGEVNVQGENVQKMDTIANRIMLYRME RCGALCAMSSEEEADLIRVSPEFPRGDYILIFDPLDGSSNIDVNINVGTIFSILRRPDGHSGEVTLDEVLQPGNRQVAAG YILYGPSTMLVLSTGQGVHGFTLDPGVGEFLLSHPNMCIPEQGYIYSVNEGNWKNWDAPAREAVNWFHGCETSDGKPYSS RYVGALVADFHRTLINGGIYMYPSDAKKPNGKLRLMCEAAPLAFLAEQAGGKASDGRGRILERVPEHLHARTPLFIGSAK DVEAVENIYAKYAGLIA
Sequences:
>Translated_337_residues MADITVTEHLLLHQKRTPQATGQFTGLLYDLILSGKSISRRINKAGLLDILGGTGEVNVQGENVQKMDTIANRIMLYRME RCGALCAMSSEEEADLIRVSPEFPRGDYILIFDPLDGSSNIDVNINVGTIFSILRRPDGHSGEVTLDEVLQPGNRQVAAG YILYGPSTMLVLSTGQGVHGFTLDPGVGEFLLSHPNMCIPEQGYIYSVNEGNWKNWDAPAREAVNWFHGCETSDGKPYSS RYVGALVADFHRTLINGGIYMYPSDAKKPNGKLRLMCEAAPLAFLAEQAGGKASDGRGRILERVPEHLHARTPLFIGSAK DVEAVENIYAKYAGLIA >Mature_336_residues ADITVTEHLLLHQKRTPQATGQFTGLLYDLILSGKSISRRINKAGLLDILGGTGEVNVQGENVQKMDTIANRIMLYRMER CGALCAMSSEEEADLIRVSPEFPRGDYILIFDPLDGSSNIDVNINVGTIFSILRRPDGHSGEVTLDEVLQPGNRQVAAGY ILYGPSTMLVLSTGQGVHGFTLDPGVGEFLLSHPNMCIPEQGYIYSVNEGNWKNWDAPAREAVNWFHGCETSDGKPYSSR YVGALVADFHRTLINGGIYMYPSDAKKPNGKLRLMCEAAPLAFLAEQAGGKASDGRGRILERVPEHLHARTPLFIGSAKD VEAVENIYAKYAGLIA
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI189083692, Length=332, Percent_Identity=41.2650602409639, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI16579888, Length=332, Percent_Identity=41.2650602409639, Blast_Score=263, Evalue=2e-70, Organism=Homo sapiens, GI22907028, Length=322, Percent_Identity=43.7888198757764, Blast_Score=259, Evalue=3e-69, Organism=Escherichia coli, GI1790679, Length=328, Percent_Identity=50, Blast_Score=318, Evalue=3e-88, Organism=Caenorhabditis elegans, GI17508131, Length=329, Percent_Identity=46.5045592705167, Blast_Score=303, Evalue=7e-83, Organism=Saccharomyces cerevisiae, GI6323409, Length=324, Percent_Identity=44.7530864197531, Blast_Score=271, Evalue=8e-74, Organism=Drosophila melanogaster, GI45550998, Length=321, Percent_Identity=45.4828660436137, Blast_Score=281, Evalue=3e-76, Organism=Drosophila melanogaster, GI19921562, Length=321, Percent_Identity=45.4828660436137, Blast_Score=281, Evalue=4e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 36811; Mature: 36680
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADITVTEHLLLHQKRTPQATGQFTGLLYDLILSGKSISRRINKAGLLDILGGTGEVNVQ CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCEEEEE GENVQKMDTIANRIMLYRMERCGALCAMSSEEEADLIRVSPEFPRGDYILIFDPLDGSSN CCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCC IDVNINVGTIFSILRRPDGHSGEVTLDEVLQPGNRQVAAGYILYGPSTMLVLSTGQGVHG EEEEEEHHHHHHHHHCCCCCCCCEEHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCCCC FTLDPGVGEFLLSHPNMCIPEQGYIYSVNEGNWKNWDAPAREAVNWFHGCETSDGKPYSS EEECCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH RYVGALVADFHRTLINGGIYMYPSDAKKPNGKLRLMCEAAPLAFLAEQAGGKASDGRGRI HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCHHH LERVPEHLHARTPLFIGSAKDVEAVENIYAKYAGLIA HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADITVTEHLLLHQKRTPQATGQFTGLLYDLILSGKSISRRINKAGLLDILGGTGEVNVQ CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEECCCCEEEEE GENVQKMDTIANRIMLYRMERCGALCAMSSEEEADLIRVSPEFPRGDYILIFDPLDGSSN CCCHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCC IDVNINVGTIFSILRRPDGHSGEVTLDEVLQPGNRQVAAGYILYGPSTMLVLSTGQGVHG EEEEEEHHHHHHHHHCCCCCCCCEEHHHHHCCCCCEEEEEEEEECCCEEEEEECCCCCCC FTLDPGVGEFLLSHPNMCIPEQGYIYSVNEGNWKNWDAPAREAVNWFHGCETSDGKPYSS EEECCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH RYVGALVADFHRTLINGGIYMYPSDAKKPNGKLRLMCEAAPLAFLAEQAGGKASDGRGRI HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCHHH LERVPEHLHARTPLFIGSAKDVEAVENIYAKYAGLIA HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA