| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220904440
Identifier: 220904440
GI number: 220904440
Start: 1377799
End: 1379517
Strand: Reverse
Name: 220904440
Synonym: Ddes_1170
Alternate gene names: NA
Gene position: 1379517-1377799 (Counterclockwise)
Preceding gene: 220904444
Following gene: 220904439
Centisome position: 48.01
GC content: 51.31
Gene sequence:
>1719_bases ATGATAAAATGGCAAGAGGTCTTCAGCAAAAATGGTCACCCCTGGAAGGACGCAACCTGCCTGTCCGCTCCGGTGGCCAT AAGCGACCTTGCGTCACTCAAGCATTTTCTTGATGCCGTACACATACGATTTTGCATGGTAAAACCGTATCAGGAAAATA AAAACTACCCGGTTGTCGAAGGGCGTGAACTTCTACCCTCTTTTGACAATGACATGTTTGAATATAAAGACCTGCCTGGC TTTGCCATGGTGGCCTTTGCCCGCCAGCTCGACTATTTCTCTGAAATATTCCAGTTCGACAAGCTCCACCCCGTAATAAC AGAAGGTGAAGGGGCCTCCTGCCCACTGGAAAATCAGGTAATGGGGCAAAATCTGCAAACCCTTGCCTCCCGTCTGCCGC GTATGCACCAGGAGGTATTCCGCCACCAGTTTCGTTCCACTGACACGGTGCTGCTTGAAAATTATCCGGCATTGATGCCC TACCTGCTCAATATGGACAGGGCACAGGTTTTGGCCTGGGATGCTGACAACCAATTTCATCTTGCTGGAATTTTTGCCTC TTTTCCTTCCGATATTGATAGCGAACTCAAGCGCTTCGGCATACGCATAGGCAAGTTTGTCTATGGTGACAGCGATATTT ATGAGCGAAACCGCATGTTTGTCTATCAATACCTCATGGAGCTTTACGGTTTCCCCATTGTGTCTGAACGGCGTACGTCC AGCGCCCTATTCTCCCGCAAACTCCACAAGATGGGCGAACATTTTCTTTTGCGCGTTCTCGGTCAGACAGACAGGACCAT TACAACGTATACCGCCACCGGGGAAAACATGCGGTACCCCCTGCTGGAAAAAGTGGCTCTGGTGGCTGTGGATGCCGATC ACGACGAGGCGCTTGAAATTATTGACCGTGACGGTTTTTTTCTCGACAAACCCCGGCGTGTGGTCATCTTGCGGGTACGA TACCGCCAGCACAGCTTTGATTCCAGCAACGTGCGCCAGGACCGTGCCCTTTCTGTGGTGGCCCAGGAAGTACTGCATCC GCTCACCGGCGAACCGCTCAAGGGCCTGAATCTTATCAAAGACACTTCGAATATGTTTTTGCGCCTTAATGACATTGTGC GGGGCGAGTTTACCGGGCGAATCATCTTCAAGCGCACCGAGGTAGTGGAAAACACCGATACCCACGAAAAACGCCTTAAG TTCCTGTACAGCTGGCTCACCAAGCACCAACGCCGCATGATCAGTTACAGTGACGAGTTTTTTGCAAATGTCAGCAAGGT GCTGTGCAACTACCTCTATTCACCTGACAACGACGAAGTGTTTGACGGGCTGCGTGAGCTTTATCAAGACGTATGCACGC GCTTCAGCTATATCCAGCAAGCCAGACGTGTGCGCATTCTTGAGGACCTGTGCGCCCGCACCTGCAAAGGCGTACACATC ACCTATCGGCAGATGATGAGTGAAGCAGTGGCCCTGCTCAACGAACTGAAATTCGAGATCGTCAACTTCTTTCCGGCGCT GGTTGACGCTGTTATTGACTGCGTTGAAAAAATTTTGCGAGACCGCTACCTTCAGCGCCAGTATCTGGAACCGCCTGAGG ACAACCTGACTCCTGCCGGACTGGAAATTCGTAAGAACTACGGACGCCTCGTCTCCCTTCTGGATGGCTTCAAGGCCGTG CGGAAGGCAAGAACAGGCAAGGAAAACATTGTAGCATGA
Upstream 100 bases:
>100_bases AGCCAGTATTGCGAAAAACGCTTATTTACCTGTAGTGACTACTGGAATTATTTTTAAAATAAGTATAAAAAATTAAAAAA TCAGGTATCAGGATACGCGG
Downstream 100 bases:
>100_bases GTTTAGCTTTTTTTTACCTTGCTCCTGAAAAGTGGGCAAAGGAAGTTTGTCTTGAAGACCAGGAAGCCCGCCACCTGAGT CAGGTTTTACGGCTTGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MIKWQEVFSKNGHPWKDATCLSAPVAISDLASLKHFLDAVHIRFCMVKPYQENKNYPVVEGRELLPSFDNDMFEYKDLPG FAMVAFARQLDYFSEIFQFDKLHPVITEGEGASCPLENQVMGQNLQTLASRLPRMHQEVFRHQFRSTDTVLLENYPALMP YLLNMDRAQVLAWDADNQFHLAGIFASFPSDIDSELKRFGIRIGKFVYGDSDIYERNRMFVYQYLMELYGFPIVSERRTS SALFSRKLHKMGEHFLLRVLGQTDRTITTYTATGENMRYPLLEKVALVAVDADHDEALEIIDRDGFFLDKPRRVVILRVR YRQHSFDSSNVRQDRALSVVAQEVLHPLTGEPLKGLNLIKDTSNMFLRLNDIVRGEFTGRIIFKRTEVVENTDTHEKRLK FLYSWLTKHQRRMISYSDEFFANVSKVLCNYLYSPDNDEVFDGLRELYQDVCTRFSYIQQARRVRILEDLCARTCKGVHI TYRQMMSEAVALLNELKFEIVNFFPALVDAVIDCVEKILRDRYLQRQYLEPPEDNLTPAGLEIRKNYGRLVSLLDGFKAV RKARTGKENIVA
Sequences:
>Translated_572_residues MIKWQEVFSKNGHPWKDATCLSAPVAISDLASLKHFLDAVHIRFCMVKPYQENKNYPVVEGRELLPSFDNDMFEYKDLPG FAMVAFARQLDYFSEIFQFDKLHPVITEGEGASCPLENQVMGQNLQTLASRLPRMHQEVFRHQFRSTDTVLLENYPALMP YLLNMDRAQVLAWDADNQFHLAGIFASFPSDIDSELKRFGIRIGKFVYGDSDIYERNRMFVYQYLMELYGFPIVSERRTS SALFSRKLHKMGEHFLLRVLGQTDRTITTYTATGENMRYPLLEKVALVAVDADHDEALEIIDRDGFFLDKPRRVVILRVR YRQHSFDSSNVRQDRALSVVAQEVLHPLTGEPLKGLNLIKDTSNMFLRLNDIVRGEFTGRIIFKRTEVVENTDTHEKRLK FLYSWLTKHQRRMISYSDEFFANVSKVLCNYLYSPDNDEVFDGLRELYQDVCTRFSYIQQARRVRILEDLCARTCKGVHI TYRQMMSEAVALLNELKFEIVNFFPALVDAVIDCVEKILRDRYLQRQYLEPPEDNLTPAGLEIRKNYGRLVSLLDGFKAV RKARTGKENIVA >Mature_572_residues MIKWQEVFSKNGHPWKDATCLSAPVAISDLASLKHFLDAVHIRFCMVKPYQENKNYPVVEGRELLPSFDNDMFEYKDLPG FAMVAFARQLDYFSEIFQFDKLHPVITEGEGASCPLENQVMGQNLQTLASRLPRMHQEVFRHQFRSTDTVLLENYPALMP YLLNMDRAQVLAWDADNQFHLAGIFASFPSDIDSELKRFGIRIGKFVYGDSDIYERNRMFVYQYLMELYGFPIVSERRTS SALFSRKLHKMGEHFLLRVLGQTDRTITTYTATGENMRYPLLEKVALVAVDADHDEALEIIDRDGFFLDKPRRVVILRVR YRQHSFDSSNVRQDRALSVVAQEVLHPLTGEPLKGLNLIKDTSNMFLRLNDIVRGEFTGRIIFKRTEVVENTDTHEKRLK FLYSWLTKHQRRMISYSDEFFANVSKVLCNYLYSPDNDEVFDGLRELYQDVCTRFSYIQQARRVRILEDLCARTCKGVHI TYRQMMSEAVALLNELKFEIVNFFPALVDAVIDCVEKILRDRYLQRQYLEPPEDNLTPAGLEIRKNYGRLVSLLDGFKAV RKARTGKENIVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66619; Mature: 66619
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKWQEVFSKNGHPWKDATCLSAPVAISDLASLKHFLDAVHIRFCMVKPYQENKNYPVVE CCCHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCHHCCCCCCCCC GRELLPSFDNDMFEYKDLPGFAMVAFARQLDYFSEIFQFDKLHPVITEGEGASCPLENQV CHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHH MGQNLQTLASRLPRMHQEVFRHQFRSTDTVLLENYPALMPYLLNMDRAQVLAWDADNQFH HCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCHHEEEECCCCCEE LAGIFASFPSDIDSELKRFGIRIGKFVYGDSDIYERNRMFVYQYLMELYGFPIVSERRTS EEHHHHHCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SALFSRKLHKMGEHFLLRVLGQTDRTITTYTATGENMRYPLLEKVALVAVDADHDEALEI HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHEEEECCCHHHHHH IDRDGFFLDKPRRVVILRVRYRQHSFDSSNVRQDRALSVVAQEVLHPLTGEPLKGLNLIK HCCCCCEECCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH DTSNMFLRLNDIVRGEFTGRIIFKRTEVVENTDTHEKRLKFLYSWLTKHQRRMISYSDEF CCHHHHEEHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH FANVSKVLCNYLYSPDNDEVFDGLRELYQDVCTRFSYIQQARRVRILEDLCARTCKGVHI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TYRQMMSEAVALLNELKFEIVNFFPALVDAVIDCVEKILRDRYLQRQYLEPPEDNLTPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LEIRKNYGRLVSLLDGFKAVRKARTGKENIVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIKWQEVFSKNGHPWKDATCLSAPVAISDLASLKHFLDAVHIRFCMVKPYQENKNYPVVE CCCHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCHHCCCCCCCCC GRELLPSFDNDMFEYKDLPGFAMVAFARQLDYFSEIFQFDKLHPVITEGEGASCPLENQV CHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHH MGQNLQTLASRLPRMHQEVFRHQFRSTDTVLLENYPALMPYLLNMDRAQVLAWDADNQFH HCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCCHHEEEECCCCCEE LAGIFASFPSDIDSELKRFGIRIGKFVYGDSDIYERNRMFVYQYLMELYGFPIVSERRTS EEHHHHHCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH SALFSRKLHKMGEHFLLRVLGQTDRTITTYTATGENMRYPLLEKVALVAVDADHDEALEI HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHEEEECCCHHHHHH IDRDGFFLDKPRRVVILRVRYRQHSFDSSNVRQDRALSVVAQEVLHPLTGEPLKGLNLIK HCCCCCEECCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHH DTSNMFLRLNDIVRGEFTGRIIFKRTEVVENTDTHEKRLKFLYSWLTKHQRRMISYSDEF CCHHHHEEHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH FANVSKVLCNYLYSPDNDEVFDGLRELYQDVCTRFSYIQQARRVRILEDLCARTCKGVHI HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH TYRQMMSEAVALLNELKFEIVNFFPALVDAVIDCVEKILRDRYLQRQYLEPPEDNLTPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC LEIRKNYGRLVSLLDGFKAVRKARTGKENIVA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA