Click here to switch to the map view.

The map label for this gene is 220904333

Identifier: 220904333

GI number: 220904333

Start: 1242745

End: 1243587

Strand: Reverse

Name: 220904333

Synonym: Ddes_1060

Alternate gene names: NA

Gene position: 1243587-1242745 (Counterclockwise)

Preceding gene: 220904334

Following gene: 220904331

Centisome position: 43.28

GC content: 58.01

Gene sequence:

>843_bases
ATGTGCATATTTCTGAAAAACACGTTTCAACCTCTCTGGAAGGATCGACCGCAGGCCGCCATGCACTTGCTCTCCATTTT
TTTCCATCGCCTGCGCCACGTGCTTGCACATGCCAAGCCGGGCGCACCTTTTATGCGGATCCTGCTTCTCGCCAGCATCT
GCATGCTGGTGGGAACATCCGGGGCCTCTGCCCTTACCGCTTCCAAGGGGCTTTCATTCTACGCCCGGGATATGGAGTTC
TATTACAAGGAAAACCGGCCCGAAACACTGCCCGGCATCCTTCGCTCGTTTGATGCGCAAAACGTGCTCTACGACCGGCA
AAAACAGCTCACCCTCGCGGCCTTTCTGGCAGAGTCCCTCAAGACAGACCCTGCCGCGCGCCGGCGCCTGCTGCCTCTGG
TCCCTTCCCTCAGCCGTGACGGCAAACGCACTCTGGCCTGGGCCGTACATCTGGCACGGCTTACGGATGAAGCGGCGCTT
ATGCAGTTGCTGCTGGATGAAAAAGACGCCATCCTGCTACAGCAGATACAGCATAATCCCACGCCCCTGCTGCAATGGGA
CCTAACAAGGGAAAAAACAGTCCTGCAGATGTATTGGGCAGCCTACACTGCTTCGGGCAACACTGCCTATCTGGACGCCA
TCATTGACGCCGCGCTGCGCTATGCCGACCTCAACTCCAGCGGCAGGCAGAATGATCCGGCTTTTGCCGTAAGCCAGACC
GCAGCGGCATCGCTTTACGAAATGGCCCCCCGCCACGAATCGGTACAAGACCGTGTGCGGCAAAGACTTGACGGCCTTTC
CGGCCCGCAGGCAGAAACCCTGCGCACCATATTGCGAAAATAG

Upstream 100 bases:

>100_bases
GCTGGCTTACGCCTCGCGGCGACGTCTGGCTGCGCAGGTGTCAGAGCAACTGCAGCGTAACGCTGCTCGAGACTCCTGTG
GCATTGGGATCAGGCCATTG

Downstream 100 bases:

>100_bases
CCGCCCGTCGCTTGCCCCCCTGCAAGAGGCAGAATCTTCACAAGTTCATCAAGCGTACATCCTCAAAATTTACGATACGC
CCGTTATGACGCTTACGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MCIFLKNTFQPLWKDRPQAAMHLLSIFFHRLRHVLAHAKPGAPFMRILLLASICMLVGTSGASALTASKGLSFYARDMEF
YYKENRPETLPGILRSFDAQNVLYDRQKQLTLAAFLAESLKTDPAARRRLLPLVPSLSRDGKRTLAWAVHLARLTDEAAL
MQLLLDEKDAILLQQIQHNPTPLLQWDLTREKTVLQMYWAAYTASGNTAYLDAIIDAALRYADLNSSGRQNDPAFAVSQT
AAASLYEMAPRHESVQDRVRQRLDGLSGPQAETLRTILRK

Sequences:

>Translated_280_residues
MCIFLKNTFQPLWKDRPQAAMHLLSIFFHRLRHVLAHAKPGAPFMRILLLASICMLVGTSGASALTASKGLSFYARDMEF
YYKENRPETLPGILRSFDAQNVLYDRQKQLTLAAFLAESLKTDPAARRRLLPLVPSLSRDGKRTLAWAVHLARLTDEAAL
MQLLLDEKDAILLQQIQHNPTPLLQWDLTREKTVLQMYWAAYTASGNTAYLDAIIDAALRYADLNSSGRQNDPAFAVSQT
AAASLYEMAPRHESVQDRVRQRLDGLSGPQAETLRTILRK
>Mature_280_residues
MCIFLKNTFQPLWKDRPQAAMHLLSIFFHRLRHVLAHAKPGAPFMRILLLASICMLVGTSGASALTASKGLSFYARDMEF
YYKENRPETLPGILRSFDAQNVLYDRQKQLTLAAFLAESLKTDPAARRRLLPLVPSLSRDGKRTLAWAVHLARLTDEAAL
MQLLLDEKDAILLQQIQHNPTPLLQWDLTREKTVLQMYWAAYTASGNTAYLDAIIDAALRYADLNSSGRQNDPAFAVSQT
AAASLYEMAPRHESVQDRVRQRLDGLSGPQAETLRTILRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31564; Mature: 31564

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIFLKNTFQPLWKDRPQAAMHLLSIFFHRLRHVLAHAKPGAPFMRILLLASICMLVGTS
CEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
GASALTASKGLSFYARDMEFYYKENRPETLPGILRSFDAQNVLYDRQKQLTLAAFLAESL
CCHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KTDPAARRRLLPLVPSLSRDGKRTLAWAVHLARLTDEAALMQLLLDEKDAILLQQIQHNP
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
TPLLQWDLTREKTVLQMYWAAYTASGNTAYLDAIIDAALRYADLNSSGRQNDPAFAVSQT
CCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
AAASLYEMAPRHESVQDRVRQRLDGLSGPQAETLRTILRK
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MCIFLKNTFQPLWKDRPQAAMHLLSIFFHRLRHVLAHAKPGAPFMRILLLASICMLVGTS
CEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
GASALTASKGLSFYARDMEFYYKENRPETLPGILRSFDAQNVLYDRQKQLTLAAFLAESL
CCHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KTDPAARRRLLPLVPSLSRDGKRTLAWAVHLARLTDEAALMQLLLDEKDAILLQQIQHNP
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
TPLLQWDLTREKTVLQMYWAAYTASGNTAYLDAIIDAALRYADLNSSGRQNDPAFAVSQT
CCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
AAASLYEMAPRHESVQDRVRQRLDGLSGPQAETLRTILRK
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA