Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220904325

Identifier: 220904325

GI number: 220904325

Start: 1232624

End: 1233883

Strand: Reverse

Name: 220904325

Synonym: Ddes_1052

Alternate gene names: NA

Gene position: 1233883-1232624 (Counterclockwise)

Preceding gene: 220904327

Following gene: 220904324

Centisome position: 42.94

GC content: 60.32

Gene sequence:

>1260_bases
ATGTCATGGCGCAGCACTGTCATCCTGCTTTTTGCCGCTCTTTGCCTGCTGGTTGCACCTTTGCGGCTTTCTGCCGCCGA
AGTTGACTTCATGCCGCAACTGGGGTTGCGTTCCCTGCCCGAGCTTGCCTGCATGGACGAAAACTCCGCTCACTGCAACC
AGGCTCTGCCCCAGACACTGCTGGTCACGTCGCCCGTAGTGGAAGACCCGGCCTGGTACTCCCCTCCCCCCGACAAAACC
CATAACAAACCGCACTATGTGGGCTGCCAGGCGCCGGGCCAGTATCTGCCCATCCTGCAAGAGGCCCTTGAGGGCAATCC
CGTAGCCATGGCCGACCTCATCATCCGCATTCAATGCGATCGTCCGGCACTGGCCGCCGCGCATCCGGACATCCCGGCCT
TCATGCATTCCGTCCCCTTCTGGCTGGAATGGGCCGCGCGTTATACCTCCCCAGGCTGGATATATGCCCGCCTTGCCCTG
TATGATGACGGCATAGGGCACACCCGTAGCGCTTATACGCGAGGCGCCTTTCTTGGCGACCCCAAATCCATGCACGCCTA
CGCCACCCGCTGGAACACCGGAACCAACCTGCACTGGCTGCTCATGGCCGCGGATGCGGGCTATGGCCCGGCAGCACATG
AAATCTCCCGCTGGTATCGCTTCGGCGGACAAAACAGCGGCTACAGCCTCCCCAAAGCTCCGGACACCGACATGGCACGC
CGATACCGGACCATAGCCATGAACAGGGGCTATCCCCGGGCCTTCGCCTATGCCGCTTTTGAAGCGCTTGCTGAGGAAAA
TGCGGGCCAGGCAGTAGAGGATGCCTGCATGTATACACATATTGGCCGTGTGCTTGAAAAGACCGACAATGGCCTTCTGC
TTGCTGACAGGTCCCTGCCTCAAATGCAGCCCATCCCCTTTGAGCAGGTACTGGCGTACGCGCTCTGCGCAGTGCTGCCG
CCCCGGCCGCTGCTTTCGCAGGAAGAAAAACTGCATTTTCAGGATTCGCAGAAAATCAGACGTCCCCGCGTCATTGACGA
TGAAATGCAGAACAGGGCCATGGAACGAGCCTCTGCCTGGCTGCGCGCCTTTCAGGCGCAACGCCAGGCAGAGCTGGTAA
TGGAGCGTGAGCGAAGGAATGCGCTGACCGCACAATTGCGTGAACAATGCAGCCATGCCCTCACATATCTCGTCAAAACG
CAAGACAGCGCACCTCTGCCGCGTCCTGTTACAGCCCGCCACGCGCCGCCCTTTATCTAG

Upstream 100 bases:

>100_bases
CTGCCAAAAGCCGGTCCGAAACATGGCATATGAATTCAGGCCTGCCGCGCTGTCCGGCAGGCAACGGCTTGATTCTCCTT
ATGCCACAGGAGGGCGTATC

Downstream 100 bases:

>100_bases
GCGCTGCAGGCAGGCATATGAGGCATCCGCGCAGAAACTGCCGGCAGAGCGCCCGTGCAGAAATACGCGCGTCTCGTGTA
CTGTCCGCAATCCCAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTLLVTSPVVEDPAWYSPPPDKT
HNKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCDRPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLAL
YDDGIGHTRSAYTRGAFLGDPKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMAR
RYRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLPQMQPIPFEQVLAYALCAVLP
PRPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAWLRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKT
QDSAPLPRPVTARHAPPFI

Sequences:

>Translated_419_residues
MSWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTLLVTSPVVEDPAWYSPPPDKT
HNKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCDRPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLAL
YDDGIGHTRSAYTRGAFLGDPKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMAR
RYRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLPQMQPIPFEQVLAYALCAVLP
PRPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAWLRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKT
QDSAPLPRPVTARHAPPFI
>Mature_418_residues
SWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTLLVTSPVVEDPAWYSPPPDKTH
NKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCDRPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLALY
DDGIGHTRSAYTRGAFLGDPKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMARR
YRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLPQMQPIPFEQVLAYALCAVLPP
RPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAWLRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKTQ
DSAPLPRPVTARHAPPFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47015; Mature: 46884

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHCCCHHHHCCCCCHHHHHHCCHHH
LVTSPVVEDPAWYSPPPDKTHNKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCD
HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEEEEEECC
RPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLALYDDGIGHTRSAYTRGAFLGD
CCCHHCCCCCHHHHHHHCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHCCCCCCC
PKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMAR
CHHHHHHEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RYRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLP
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
QMQPIPFEQVLAYALCAVLPPRPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAW
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
LRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKTQDSAPLPRPVTARHAPPFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWRSTVILLFAALCLLVAPLRLSAAEVDFMPQLGLRSLPELACMDENSAHCNQALPQTL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHCCCHHHHCCCCCHHHHHHCCHHH
LVTSPVVEDPAWYSPPPDKTHNKPHYVGCQAPGQYLPILQEALEGNPVAMADLIIRIQCD
HHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEEEEEEEECC
RPALAAAHPDIPAFMHSVPFWLEWAARYTSPGWIYARLALYDDGIGHTRSAYTRGAFLGD
CCCHHCCCCCHHHHHHHCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHCCCCCCC
PKSMHAYATRWNTGTNLHWLLMAADAGYGPAAHEISRWYRFGGQNSGYSLPKAPDTDMAR
CHHHHHHEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RYRTIAMNRGYPRAFAYAAFEALAEENAGQAVEDACMYTHIGRVLEKTDNGLLLADRSLP
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
QMQPIPFEQVLAYALCAVLPPRPLLSQEEKLHFQDSQKIRRPRVIDDEMQNRAMERASAW
CCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
LRAFQAQRQAELVMERERRNALTAQLREQCSHALTYLVKTQDSAPLPRPVTARHAPPFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA