Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is dnaJ [C]

Identifier: 220904258

GI number: 220904258

Start: 1151875

End: 1152879

Strand: Reverse

Name: dnaJ [C]

Synonym: Ddes_0985

Alternate gene names: 220904258

Gene position: 1152879-1151875 (Counterclockwise)

Preceding gene: 220904259

Following gene: 220904257

Centisome position: 40.12

GC content: 58.51

Gene sequence:

>1005_bases
ATGCGACGCCGCTCCCGCCAGATATCCCTCAAGGAATGCTACGAAATTCTCAAGCTTGAGAAGAACGCTGACCTTGCCGC
CGTAAAAAGGGCTTACCGCCGACGTGCCTTTGAGCTGCACCCTGACCTGAATCCCGGCAATGCCGAGGCCAGCCGGGATT
TTCAGATGCTCAACGAAGCCTATGTGGCGCTTTCAGGCATCCTCAAGCATGAAGACGGAGTCAGGGCTACATCTGAAGCG
CGAAAGGCGGCACAGAAACCCAGAAAAAACGCCGACCGGGCGAATGGCTCCGATAAAAAATCCGGCCCCGCTACAGATAC
CGGCCAGACTGAAAGCAAGGCCCCTCCCCCGCCTGGCGGAACCGAAGCAACGGGGCAGCAGCAGGCAAAAACAGCCGGGG
CAGACGAGGGCGCGCAGACCGAGCAGCAAAAGCCTCAAAGCGAACAAGCCCCCGACCCTGAAGAAAATACCGCAGACCGT
AACGGCACGGCCTATGCGGAACAGGACGTGCTGCGCGACCTGCTTAACGATCCTTTTGCCCGCCGTGTTTTTGAAGATAT
TTATAGCGAACTGAACCGGCAGCATGCCGAAAAACCACAGCAGGAAACAGCCGAAGCCCATACAGCGGAATCCGCCCCGC
AAAGCAGGGCCAAGCCAAAGGCCGCGCAGAAAGAAAAGAAAAGCGCTCCACTCCATAAAAGCAACCTGGCCTGGGGTACG
CCCAAATGGTCATCTGACATGACAAAAGGCGTCACCGGCCTGGTCAGGGGCTGGCTGCGCCGACAGATCGACGAAGAGCA
AAGCCTTACCTTGCCCGCCGCAAACCTTGCGCCGGGCTGCCGGGTGCGCTTGCAGATACGCCAGGGAATTCAGGCTGAGC
TTAAAACGGTTGAAATAACCCTGCCCCCTGACTTTACCGTGGGTAAACCCATACGCCTGCGCGGGCTGGGCAAGCGCGTC
GGCCCCTGGCAAGGGGATCTCTATCTTACACTGTACACCGAGTAG

Upstream 100 bases:

>100_bases
CGCAGCCTTTGAACGACAAGGCCGCCAGTACCTGCGCGAGCACGGCCTGCTTGCCAGCGATTGCAACTGCGAAGCCAACG
CCCTAATCCTTAAATAAATC

Downstream 100 bases:

>100_bases
GCCCTGCCCGTCCGCTGCGGGGCAGACGTGCCTCAGCCCATCCGTCAGTAGCAATGGTAACATACGGCTTCATTCCAGAT
GAACGGAAAAACATTTCCCA

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: DNAJ Domain Protein; DNAJ Domain-Containing Protein; Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ-Class Molecular Chaperone

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEAYVALSGILKHEDGVRATSEA
RKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGGTEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADR
NGTAYAEQDVLRDLLNDPFARRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT
PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEITLPPDFTVGKPIRLRGLGKRV
GPWQGDLYLTLYTE

Sequences:

>Translated_334_residues
MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEAYVALSGILKHEDGVRATSEA
RKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGGTEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADR
NGTAYAEQDVLRDLLNDPFARRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT
PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEITLPPDFTVGKPIRLRGLGKRV
GPWQGDLYLTLYTE
>Mature_334_residues
MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEAYVALSGILKHEDGVRATSEA
RKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGGTEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADR
NGTAYAEQDVLRDLLNDPFARRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT
PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEITLPPDFTVGKPIRLRGLGKRV
GPWQGDLYLTLYTE

Specific function: Interacts With Dnak To Disassemble A Protein Complex At The Phage Lambda Origin Of Replication. Stimulates, Jointly With Grpe, The Atpase Activity Of Dnak. [C]

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36977; Mature: 36977

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEA
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHH
YVALSGILKHEDGVRATSEARKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADRNGTAYAEQDVLRDLLNDPFA
CCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
RRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCCCCCC
PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEIT
CCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEHHHHHCCCEEEEEEEEE
LPPDFTVGKPIRLRGLGKRVGPWQGDLYLTLYTE
ECCCCCCCCCEEEECCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MRRRSRQISLKECYEILKLEKNADLAAVKRAYRRRAFELHPDLNPGNAEASRDFQMLNEA
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHH
YVALSGILKHEDGVRATSEARKAAQKPRKNADRANGSDKKSGPATDTGQTESKAPPPPGG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TEATGQQQAKTAGADEGAQTEQQKPQSEQAPDPEENTADRNGTAYAEQDVLRDLLNDPFA
CCCCCHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHH
RRVFEDIYSELNRQHAEKPQQETAEAHTAESAPQSRAKPKAAQKEKKSAPLHKSNLAWGT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHCCCCCCCCCCCCC
PKWSSDMTKGVTGLVRGWLRRQIDEEQSLTLPAANLAPGCRVRLQIRQGIQAELKTVEIT
CCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCEEEHHHHHCCCEEEEEEEEE
LPPDFTVGKPIRLRGLGKRVGPWQGDLYLTLYTE
ECCCCCCCCCEEEECCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA