| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is cutF [H]
Identifier: 218928236
GI number: 218928236
Start: 1209814
End: 1210542
Strand: Direct
Name: cutF [H]
Synonym: YPO1067
Alternate gene names: 218928236
Gene position: 1209814-1210542 (Clockwise)
Preceding gene: 218928235
Following gene: 218928243
Centisome position: 26.0
GC content: 42.94
Gene sequence:
>729_bases ATGACTTCATTCCATATATATCGGACACAGTATGGGAGAATCACTGTGAGTAAATTAACGATAACGCTACTTTTGGCAGT AGGTGCGCTGTCATTATTAGGCTGTAATAATCGCTCTCAACCTGCTGAACAGGTTTTGCAACCAATGCAGCAGAGCTATC AGGGCGTATTACCTTGTGCGGATTGCAGTGGCTTAGACACTTCTTTGTTCCTCGATAGTGATGGGACTTTTATCTTGAAA GAAGTTTATCTCGGCACTAAAGATGGCGACCAAACTTTTGCAGAATATGGTAAATGGGCACGTACTGCTGATAAGTTAGT GTTAACCAACGGTCAGGGAGAAAAACGTTACTTCCACCCTGTCGATAAAAGCTTGGTGATGCTCGATCAGCAAGGTTTAC CCATTAAATCGACACTGAATTATCAGTTGGAACCCAGCGACCAGCCGTTATCCAAAACGCCAATGCCACTAAGTGGTATG TATAAATACTTTGCTGATGCCGCCATATTTACTGATTGTGTAACGGGTAAGGCGTTCCCGGTAGAGAATAATATCGAACT GGAAACCGGGTATTTAAACGCTCGCAGAAACCCTGGAGAACCTGTGTTTTTGACCCTCAATGGGTATTTTGATTCAAGGC CATCAATGGAAGAAGGGCGAACGAATAAAACGCTGATTCCGGAGGGGGATATTCAGTTTAATGCCAATAAAAGTTGTGAG AAAAAATAG
Upstream 100 bases:
>100_bases TGAGGGTAAAGTCCGCAAAGGGGCGACAAAAGCGCTGCGTGGTAAAATACATCAAGAGTGAAGTCGATATTTATATGAAC GTTGATACATTGCGGTTGAT
Downstream 100 bases:
>100_bases CCCTTGTCCATAGCTAAAATAAGAAGCCGCACGGTAGTTCAAGTTCTCCGGCGGCTTCATCAGTAAAATACCCCGCTTAT GGGGACTCTTTATTTATGGC
Product: lipoprotein involved with copper homeostasis and adhesion
Products: NA
Alternate protein names: Copper homeostasis protein CutF [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTSFHIYRTQYGRITVSKLTITLLLAVGALSLLGCNNRSQPAEQVLQPMQQSYQGVLPCADCSGLDTSLFLDSDGTFILK EVYLGTKDGDQTFAEYGKWARTADKLVLTNGQGEKRYFHPVDKSLVMLDQQGLPIKSTLNYQLEPSDQPLSKTPMPLSGM YKYFADAAIFTDCVTGKAFPVENNIELETGYLNARRNPGEPVFLTLNGYFDSRPSMEEGRTNKTLIPEGDIQFNANKSCE KK
Sequences:
>Translated_242_residues MTSFHIYRTQYGRITVSKLTITLLLAVGALSLLGCNNRSQPAEQVLQPMQQSYQGVLPCADCSGLDTSLFLDSDGTFILK EVYLGTKDGDQTFAEYGKWARTADKLVLTNGQGEKRYFHPVDKSLVMLDQQGLPIKSTLNYQLEPSDQPLSKTPMPLSGM YKYFADAAIFTDCVTGKAFPVENNIELETGYLNARRNPGEPVFLTLNGYFDSRPSMEEGRTNKTLIPEGDIQFNANKSCE KK >Mature_241_residues TSFHIYRTQYGRITVSKLTITLLLAVGALSLLGCNNRSQPAEQVLQPMQQSYQGVLPCADCSGLDTSLFLDSDGTFILKE VYLGTKDGDQTFAEYGKWARTADKLVLTNGQGEKRYFHPVDKSLVMLDQQGLPIKSTLNYQLEPSDQPLSKTPMPLSGMY KYFADAAIFTDCVTGKAFPVENNIELETGYLNARRNPGEPVFLTLNGYFDSRPSMEEGRTNKTLIPEGDIQFNANKSCEK K
Specific function: Involved in copper homeostasis. Could be involved in both copper efflux and the delivery of copper to copper-dependent enzymes. When overproduced induces degP through the activation of the two-component system CpxA/CpxR [H]
COG id: COG3015
COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786390, Length=230, Percent_Identity=48.2608695652174, Blast_Score=226, Evalue=1e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007298 [H]
Pfam domain/function: PF04170 NlpE [H]
EC number: NA
Molecular weight: Translated: 26936; Mature: 26805
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFHIYRTQYGRITVSKLTITLLLAVGALSLLGCNNRSQPAEQVLQPMQQSYQGVLPCA CCCEEEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC DCSGLDTSLFLDSDGTFILKEVYLGTKDGDQTFAEYGKWARTADKLVLTNGQGEKRYFHP CCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEECC VDKSLVMLDQQGLPIKSTLNYQLEPSDQPLSKTPMPLSGMYKYFADAAIFTDCVTGKAFP CCCEEEEECCCCCCEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC VENNIELETGYLNARRNPGEPVFLTLNGYFDSRPSMEEGRTNKTLIPEGDIQFNANKSCE CCCCCEEEECEEECCCCCCCEEEEEEECCCCCCCCHHHCCCCCEECCCCCEEECCCCCCC KK CC >Mature Secondary Structure TSFHIYRTQYGRITVSKLTITLLLAVGALSLLGCNNRSQPAEQVLQPMQQSYQGVLPCA CCEEEEEEECCEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCC DCSGLDTSLFLDSDGTFILKEVYLGTKDGDQTFAEYGKWARTADKLVLTNGQGEKRYFHP CCCCCCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEECC VDKSLVMLDQQGLPIKSTLNYQLEPSDQPLSKTPMPLSGMYKYFADAAIFTDCVTGKAFP CCCEEEEECCCCCCEECCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC VENNIELETGYLNARRNPGEPVFLTLNGYFDSRPSMEEGRTNKTLIPEGDIQFNANKSCE CCCCCEEEECEEECCCCCCCEEEEEEECCCCCCCCHHHCCCCCEECCCCCEEECCCCCCC KK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7635808; 7635807; 9278503 [H]