Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is 218927997
Identifier: 218927997
GI number: 218927997
Start: 896258
End: 896674
Strand: Reverse
Name: 218927997
Synonym: YPO0818
Alternate gene names: NA
Gene position: 896674-896258 (Counterclockwise)
Preceding gene: 218927998
Following gene: 218927996
Centisome position: 19.27
GC content: 29.26
Gene sequence:
>417_bases ATGTATGTTGATACGGTTTCTGTTGTCTCTGGTAGTAAATTCATTGATATCAATGGTAAAGGAGTCATTGATTATGAAAA AGAGATGTCTTTGGATTGCTGTATGAATAAAATCCATTTTCACACGAGAAAAGTTAGCATTGATATTAATGAGAAACAAA AAAGACTGGTTATGTGTTTGTTTAACGATGTAAATAGAAAGCAAGATATTATAAAAGTAGTCTGGTACGAAAACCATAAA AGTATTTCAGATAATAACTACCACCAATTAATTCATAAGTTTAGAGTGCATTTGAAAAGTTTTGGGATACCTGAAGGCAT TATTAAAACAATAAATAGATATGGAATTAGACTTGATCCGAGTTTATTAATAACAGTTATGTCCACTAAGATGAATGAGA GATTTAGTGGTTATTAA
Upstream 100 bases:
>100_bases TTATTCATTGAGTGACAACGATAATAAACACGTATTTCCTTATCACATCTTTAACGTGATCGGTTGTTATAAATTTAATG AATAATTTTAAGGGTTATCT
Downstream 100 bases:
>100_bases TAAATAATACTCACCAGATTTTTTCATTATTATATGTTTGCTATCATTATTTATAATGAGGTTTTTTTTGTTAAAGATAA GACTAAAAAATCCTTTTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCLFNDVNRKQDIIKVVWYENHK SISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDPSLLITVMSTKMNERFSGY
Sequences:
>Translated_138_residues MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCLFNDVNRKQDIIKVVWYENHK SISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDPSLLITVMSTKMNERFSGY >Mature_138_residues MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCLFNDVNRKQDIIKVVWYENHK SISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDPSLLITVMSTKMNERFSGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16172; Mature: 16172
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCL CCEEEEEEECCCEEEEECCCEEEEHHHHCCHHHHHHHHHEEEEEEEEEECCCHHHEEEEE FNDVNRKQDIIKVVWYENHKSISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDP HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECH SLLITVMSTKMNERFSGY HHEEEEHHHHHCHHCCCC >Mature Secondary Structure MYVDTVSVVSGSKFIDINGKGVIDYEKEMSLDCCMNKIHFHTRKVSIDINEKQKRLVMCL CCEEEEEEECCCEEEEECCCEEEEHHHHCCHHHHHHHHHEEEEEEEEEECCCHHHEEEEE FNDVNRKQDIIKVVWYENHKSISDNNYHQLIHKFRVHLKSFGIPEGIIKTINRYGIRLDP HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECH SLLITVMSTKMNERFSGY HHEEEEHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA