| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is ptsP [H]
Identifier: 218927965
GI number: 218927965
Start: 861441
End: 863687
Strand: Reverse
Name: ptsP [H]
Synonym: YPO0785
Alternate gene names: 218927965
Gene position: 863687-861441 (Counterclockwise)
Preceding gene: 218927966
Following gene: 218927964
Centisome position: 18.56
GC content: 53.4
Gene sequence:
>2247_bases ATGCTCATGCGTTTGCGAGAAGTAGTTGAGAAAGTGGCGATGGCAACCGGCCTGACGGAGGCGTTAGAGCTGTTGGTCAA TGAAACCTGTCTGGCGATGGACACGGAAGTCTGTTCGATTTATCTGGCAGACAATGACCGCCGTTGTTACTACCTAATGG CGACCAGGGGGCTGAAAAAGCCCCGTGGGCGTACTATCACGCTGGCTTTTGACGAGGGGATCGTTGGGCTGGTGGGGCGT TTGGCCGAGCCAATTAACCTGGCTGATGCTCAAAGCCATCCCAGTTTTAAATATGTCCCGCAAGTCAAAGAGGAACGCTA TCGGGCGTTTCTCGGGGTGCCCATTATCTACCGCCGCCAGTTGCTTGGTGTGCTGGTGGTTCAACAGCGTGAGCACCGTC AGTTTGATGAGAGCGAAGAGTCGTTCATGGTCACGCTGGCAACACAGTTGGCGGGCATCCTTTCTCAATCTCAGCTAAAT GCCATTTTTGGTCAGTATCGCCAAACACGGATCCGTGCATTGGCGGCGGCTCCTGGTGTCGCGGTGGCAGAAGGCTGGCA AGATATCTCACAGCCTTCGCTTGATCTGGTCTATGAGGCCTCAACGCTTGATAGCACCCTTGAACGTGAACGTCTGACTC AGGCCTTGGAAGAGGCTGCGGCTGAGTTTCGTCGCTTCAGTAAGCGCTTTGCCGCCAGTTCACAAAAAGAGAGTGCGGCA ATTTTCGATCTCTACTCCCACTTGCTAAATGATGCTCGCTTAAAGCGTGAGCTATTTGCGCAAATTGATGCAGGCGCGGT GGCTGAGTGGGCGGTTAAACAGGTGGTTGAGGCGTTTGCTGCCCAGTTTGCCAGTCTGCAAGATACCTATATGCGCGAGC GTGCTAGTGACCTGCGGGCATTAGGCCAACGCTTGTTGTTCCATCTTGATGACAGTACCTCTGGAGCCAGCCAGTGGCCT GAGCGCTTTATCCTGGTTGCTGATGAACTTACTGCGACATTGCTCGCCGAGGTGCCACAGGACCGCTTGGCGGGGGTTGT GGTGCGTGATGGTGCCGCCAACTCTCATGCGGCTATTTTGGTCCGGGCAATGGGCATCCCGACAGTGATGGGGGCGGATA TCCAGCCTGCATTACTCAGCCAGCGGCTGCTGATTGTTGATGGTTATCGTGGCGAAGTATTAGTTGATCCTGAACCGGTA CTGGTCAAAGAGTACCAACGGCTGGTCACCGAAGAGATTGAACTCAGTAAGCTGGCTGAAGATGATGTTGAGCAACCTGC GGCCCTGAAAAGTGGTGAACGGATCCAGGTGATGCTAAACGCGGGCCTTAGCCCAGAGCACGAACAGTTACTGGGGGGCA GGGTAGATGGTGTAGGCCTGTACCGCACAGAAATACCGTTTATGTTGCAAAGTGGTTTCCCGTCGGAAGAAGAGCAAGTT GCGCAATACCAAGGCATGTTACAGCTTTATCCACAAAAGCCCGTGACCTTGCGTACCTTGGATATCGGTGCGGATAAGCA GCTCCCCTACATGCCTATCAGCGAGGAGAACCCTTGTCTGGGCTGGCGCGGCATTCGTATCACCCTGGATCAACCCGAAA TCTTTTTGATTCAGGTAAGAGCAATGCTCAGAGCTAATGCCGGGACCGGTAATTTAGGTATTTTATTGCCGATGATCACC AGTATCGAAGAGGTTGATGAAGCGAAACGTTTGATTGACCGTGCGGGTCGCGAAGTAGAGGAAATGCTCGGTTATGTGCT GCCACAACCTCGGTTGGGGGTGATGATTGAAGTTCCATCCATGATTTTCATGCTGCCTTACTTGACGTCTCGGGTGGATT TTATCTCGGTTGGTACCAATGATCTGACGCAATATTTACTGGCCGTTGATCGCAACAATACCCGGGTGGCTTCGTTGTAC GACAGCCTCCACCCAGCGATGTTACAAGTGCTTCGCCAAATTCTGATGCAGGCAACAGAGTCAGGCCTGCAAGTCAGTCT CTGTGGTGAAATGGCCGGTGATCCGATGGGGGCGTTACTGCTGGTTGGGCTGGGTTACCGTAATCTCAGTATGAACGGCC GCAGTGTGGCACGCATCAAATACCTGTTACGTAATATAGAATTGGCCGATGCACAAGTGCTGGCGGCACGGGTATTAACC GCGCAGATGACCACCGATGTGCGTCACCTAACCGCTGCATTTATGGAGCGCCGTGGTTTAGGTGGGCTGATTCGGGGTGG GAAGTAG
Upstream 100 bases:
>100_bases AATGAAAGAATTTGCTGCAACCGTAATGCCTGTGCAGGAGGTCGCTCCTCCACGGGTACCGCCCGCTTATCGCCGTAAAA GAGGTTAAGTTAAGCCGATC
Downstream 100 bases:
>100_bases AATGCTTATAAATACCAAAAGCCATCGAGGTTGCAGTCATACGGCAAGTGAATGAATATCAATGCGCTGCCTTAGATCAG TGATTTAAAGGGGCGAGAGC
Product: fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain
Products: NA
Alternate protein names: Enzyme I-Ntr; Phosphotransferase system, enzyme I [H]
Number of amino acids: Translated: 748; Mature: 748
Protein sequence:
>748_residues MLMRLREVVEKVAMATGLTEALELLVNETCLAMDTEVCSIYLADNDRRCYYLMATRGLKKPRGRTITLAFDEGIVGLVGR LAEPINLADAQSHPSFKYVPQVKEERYRAFLGVPIIYRRQLLGVLVVQQREHRQFDESEESFMVTLATQLAGILSQSQLN AIFGQYRQTRIRALAAAPGVAVAEGWQDISQPSLDLVYEASTLDSTLERERLTQALEEAAAEFRRFSKRFAASSQKESAA IFDLYSHLLNDARLKRELFAQIDAGAVAEWAVKQVVEAFAAQFASLQDTYMRERASDLRALGQRLLFHLDDSTSGASQWP ERFILVADELTATLLAEVPQDRLAGVVVRDGAANSHAAILVRAMGIPTVMGADIQPALLSQRLLIVDGYRGEVLVDPEPV LVKEYQRLVTEEIELSKLAEDDVEQPAALKSGERIQVMLNAGLSPEHEQLLGGRVDGVGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQLYPQKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAGTGNLGILLPMIT SIEEVDEAKRLIDRAGREVEEMLGYVLPQPRLGVMIEVPSMIFMLPYLTSRVDFISVGTNDLTQYLLAVDRNNTRVASLY DSLHPAMLQVLRQILMQATESGLQVSLCGEMAGDPMGALLLVGLGYRNLSMNGRSVARIKYLLRNIELADAQVLAARVLT AQMTTDVRHLTAAFMERRGLGGLIRGGK
Sequences:
>Translated_748_residues MLMRLREVVEKVAMATGLTEALELLVNETCLAMDTEVCSIYLADNDRRCYYLMATRGLKKPRGRTITLAFDEGIVGLVGR LAEPINLADAQSHPSFKYVPQVKEERYRAFLGVPIIYRRQLLGVLVVQQREHRQFDESEESFMVTLATQLAGILSQSQLN AIFGQYRQTRIRALAAAPGVAVAEGWQDISQPSLDLVYEASTLDSTLERERLTQALEEAAAEFRRFSKRFAASSQKESAA IFDLYSHLLNDARLKRELFAQIDAGAVAEWAVKQVVEAFAAQFASLQDTYMRERASDLRALGQRLLFHLDDSTSGASQWP ERFILVADELTATLLAEVPQDRLAGVVVRDGAANSHAAILVRAMGIPTVMGADIQPALLSQRLLIVDGYRGEVLVDPEPV LVKEYQRLVTEEIELSKLAEDDVEQPAALKSGERIQVMLNAGLSPEHEQLLGGRVDGVGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQLYPQKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAGTGNLGILLPMIT SIEEVDEAKRLIDRAGREVEEMLGYVLPQPRLGVMIEVPSMIFMLPYLTSRVDFISVGTNDLTQYLLAVDRNNTRVASLY DSLHPAMLQVLRQILMQATESGLQVSLCGEMAGDPMGALLLVGLGYRNLSMNGRSVARIKYLLRNIELADAQVLAARVLT AQMTTDVRHLTAAFMERRGLGGLIRGGK >Mature_748_residues MLMRLREVVEKVAMATGLTEALELLVNETCLAMDTEVCSIYLADNDRRCYYLMATRGLKKPRGRTITLAFDEGIVGLVGR LAEPINLADAQSHPSFKYVPQVKEERYRAFLGVPIIYRRQLLGVLVVQQREHRQFDESEESFMVTLATQLAGILSQSQLN AIFGQYRQTRIRALAAAPGVAVAEGWQDISQPSLDLVYEASTLDSTLERERLTQALEEAAAEFRRFSKRFAASSQKESAA IFDLYSHLLNDARLKRELFAQIDAGAVAEWAVKQVVEAFAAQFASLQDTYMRERASDLRALGQRLLFHLDDSTSGASQWP ERFILVADELTATLLAEVPQDRLAGVVVRDGAANSHAAILVRAMGIPTVMGADIQPALLSQRLLIVDGYRGEVLVDPEPV LVKEYQRLVTEEIELSKLAEDDVEQPAALKSGERIQVMLNAGLSPEHEQLLGGRVDGVGLYRTEIPFMLQSGFPSEEEQV AQYQGMLQLYPQKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAGTGNLGILLPMIT SIEEVDEAKRLIDRAGREVEEMLGYVLPQPRLGVMIEVPSMIFMLPYLTSRVDFISVGTNDLTQYLLAVDRNNTRVASLY DSLHPAMLQVLRQILMQATESGLQVSLCGEMAGDPMGALLLVGLGYRNLSMNGRSVARIKYLLRNIELADAQVLAARVLT AQMTTDVRHLTAAFMERRGLGGLIRGGK
Specific function: Component of the phosphoenolpyruvate-dependent nitrogen- metabolic phosphotransferase system (nitrogen-metabolic PTS), that seems to be involved in regulating nitrogen metabolism. Enzyme I- Ntr transfers the phosphoryl group from phosphoenolpyruvate (PEP)
COG id: COG3605
COG function: function code T; Signal transduction protein containing GAF and PtsI domains
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GAF domain [H]
Homologues:
Organism=Escherichia coli, GI1789193, Length=747, Percent_Identity=79.2503346720214, Blast_Score=1241, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=541, Percent_Identity=35.1201478743068, Blast_Score=305, Evalue=6e-84, Organism=Escherichia coli, GI48994992, Length=509, Percent_Identity=32.2200392927308, Blast_Score=256, Evalue=4e-69, Organism=Escherichia coli, GI1788726, Length=521, Percent_Identity=32.6295585412668, Blast_Score=233, Evalue=3e-62, Organism=Escherichia coli, GI1787994, Length=408, Percent_Identity=25.7352941176471, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI226510935, Length=207, Percent_Identity=28.0193236714976, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003018 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR008731 - InterPro: IPR015813 [H]
Pfam domain/function: PF01590 GAF; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF02896 PEP-utilizers_C [H]
EC number: =2.7.3.9 [H]
Molecular weight: Translated: 83051; Mature: 83051
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMRLREVVEKVAMATGLTEALELLVNETCLAMDTEVCSIYLADNDRRCYYLMATRGLKK CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCEEEEEEECCCCEEEEEEEECCCCC PRGRTITLAFDEGIVGLVGRLAEPINLADAQSHPSFKYVPQVKEERYRAFLGVPIIYRRQ CCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH LLGVLVVQQREHRQFDESEESFMVTLATQLAGILSQSQLNAIFGQYRQTRIRALAAAPGV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVAEGWQDISQPSLDLVYEASTLDSTLERERLTQALEEAAAEFRRFSKRFAASSQKESAA HHHHCHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IFDLYSHLLNDARLKRELFAQIDAGAVAEWAVKQVVEAFAAQFASLQDTYMRERASDLRA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQRLLFHLDDSTSGASQWPERFILVADELTATLLAEVPQDRLAGVVVRDGAANSHAAIL HHHHHEEEECCCCCCCCCCCHHEEEEHHHHHHHHHHHCCHHHHCEEEEECCCCCCCCEEE VRAMGIPTVMGADIQPALLSQRLLIVDGYRGEVLVDPEPVLVKEYQRLVTEEIELSKLAE EEECCCCCCCCCCCCHHHHCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH DDVEQPAALKSGERIQVMLNAGLSPEHEQLLGGRVDGVGLYRTEIPFMLQSGFPSEEEQV HHHCCCHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCEEEECCCCHHHHCCCCCCHHHH AQYQGMLQLYPQKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHH AMLRANAGTGNLGILLPMITSIEEVDEAKRLIDRAGREVEEMLGYVLPQPRLGVMIEVPS HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECHH MIFMLPYLTSRVDFISVGTNDLTQYLLAVDRNNTRVASLYDSLHPAMLQVLRQILMQATE HHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHC SGLQVSLCGEMAGDPMGALLLVGLGYRNLSMNGRSVARIKYLLRNIELADAQVLAARVLT CCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AQMTTDVRHLTAAFMERRGLGGLIRGGK HHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLMRLREVVEKVAMATGLTEALELLVNETCLAMDTEVCSIYLADNDRRCYYLMATRGLKK CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCEEEEEEECCCCEEEEEEEECCCCC PRGRTITLAFDEGIVGLVGRLAEPINLADAQSHPSFKYVPQVKEERYRAFLGVPIIYRRQ CCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHH LLGVLVVQQREHRQFDESEESFMVTLATQLAGILSQSQLNAIFGQYRQTRIRALAAAPGV HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AVAEGWQDISQPSLDLVYEASTLDSTLERERLTQALEEAAAEFRRFSKRFAASSQKESAA HHHHCHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IFDLYSHLLNDARLKRELFAQIDAGAVAEWAVKQVVEAFAAQFASLQDTYMRERASDLRA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQRLLFHLDDSTSGASQWPERFILVADELTATLLAEVPQDRLAGVVVRDGAANSHAAIL HHHHHEEEECCCCCCCCCCCHHEEEEHHHHHHHHHHHCCHHHHCEEEEECCCCCCCCEEE VRAMGIPTVMGADIQPALLSQRLLIVDGYRGEVLVDPEPVLVKEYQRLVTEEIELSKLAE EEECCCCCCCCCCCCHHHHCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH DDVEQPAALKSGERIQVMLNAGLSPEHEQLLGGRVDGVGLYRTEIPFMLQSGFPSEEEQV HHHCCCHHHCCCCEEEEEEECCCCCCHHHHHCCCCCCCEEEECCCCHHHHCCCCCCHHHH AQYQGMLQLYPQKPVTLRTLDIGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVR HHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEHHHHH AMLRANAGTGNLGILLPMITSIEEVDEAKRLIDRAGREVEEMLGYVLPQPRLGVMIEVPS HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECHH MIFMLPYLTSRVDFISVGTNDLTQYLLAVDRNNTRVASLYDSLHPAMLQVLRQILMQATE HHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHC SGLQVSLCGEMAGDPMGALLLVGLGYRNLSMNGRSVARIKYLLRNIELADAQVLAARVLT CCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH AQMTTDVRHLTAAFMERRGLGGLIRGGK HHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 7896715; 8973315 [H]