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The map label for this gene is 218906640

Identifier: 218906640

GI number: 218906640

Start: 5264502

End: 5264858

Strand: Reverse

Name: 218906640

Synonym: BCAH820_5554

Alternate gene names: NA

Gene position: 5264858-5264502 (Counterclockwise)

Preceding gene: 218906641

Following gene: 218906639

Centisome position: 99.29

GC content: 29.69

Gene sequence:

>357_bases
ATGAAGCTAAAGTGTCTAAGTGGTCATGACTTTATAGATAGTTTTGATAAATTCATTGAAGCACCTAAATTTAATAGGTT
ATTTATAAAAAGGTGGTTCATTGAAAATGACAATGGTTCAGGAGTCTATGTGATATTTAATAAGCAATTTGAGCCATTAT
ATGTTGGCTGTTCTAAGGATTTAAAAACAAGATTGCCATCACATTTATATAAGGGGAAACGAAAATTAGAAGGATACTTT
GATGAAGTGCTTTTTATAGGAATAAAATATACGCAAGGTGATCCAACAATATTAGAGCGTAAATACATAAAAAGGTTTGA
ACCGCTTTTAAATCAGTATAGATACCTTTCTAGTTAA

Upstream 100 bases:

>100_bases
AATTGTTAGTTCTCAGCTTTGGAACTCGGTGAATGAGGTTATAAAAAGGGGGGATATACACAGGAAATAAGGCATGAAAA
CATTAAGGGGGTACGCTTAT

Downstream 100 bases:

>100_bases
TTAAAAACAATAAATCATAATATGCGAATTAAATTATGGATATAATTATAGAAACAAATAAAAAGTTTATGAACCAACTT
AAAAAATAAGCCACTTTTCT

Product: excinuclease ABC, C subunit, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MKLKCLSGHDFIDSFDKFIEAPKFNRLFIKRWFIENDNGSGVYVIFNKQFEPLYVGCSKDLKTRLPSHLYKGKRKLEGYF
DEVLFIGIKYTQGDPTILERKYIKRFEPLLNQYRYLSS

Sequences:

>Translated_118_residues
MKLKCLSGHDFIDSFDKFIEAPKFNRLFIKRWFIENDNGSGVYVIFNKQFEPLYVGCSKDLKTRLPSHLYKGKRKLEGYF
DEVLFIGIKYTQGDPTILERKYIKRFEPLLNQYRYLSS
>Mature_118_residues
MKLKCLSGHDFIDSFDKFIEAPKFNRLFIKRWFIENDNGSGVYVIFNKQFEPLYVGCSKDLKTRLPSHLYKGKRKLEGYF
DEVLFIGIKYTQGDPTILERKYIKRFEPLLNQYRYLSS

Specific function: Unknown

COG id: COG0322

COG function: function code L; Nuclease subunit of the excinuclease complex

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14105; Mature: 14105

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKCLSGHDFIDSFDKFIEAPKFNRLFIKRWFIENDNGSGVYVIFNKQFEPLYVGCSKD
CEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEECCHH
LKTRLPSHLYKGKRKLEGYFDEVLFIGIKYTQGDPTILERKYIKRFEPLLNQYRYLSS
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLKCLSGHDFIDSFDKFIEAPKFNRLFIKRWFIENDNGSGVYVIFNKQFEPLYVGCSKD
CEEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCEEEEECCHH
LKTRLPSHLYKGKRKLEGYFDEVLFIGIKYTQGDPTILERKYIKRFEPLLNQYRYLSS
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA