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The map label for this gene is sucC [H]

Identifier: 218904964

GI number: 218904964

Start: 3687293

End: 3687802

Strand: Reverse

Name: sucC [H]

Synonym: BCAH820_3848

Alternate gene names: 218904964

Gene position: 3687802-3687293 (Counterclockwise)

Preceding gene: 218904965

Following gene: 218904963

Centisome position: 69.55

GC content: 36.08

Gene sequence:

>510_bases
TTGATTCTAACGCTTTATATCGCCATAAAGACATTTTTAGAACTTCGTGATCTTGATGAAGAAGATGCAAAAGAAATCGA
AGCTTCTAAATATGACTTAAACTACATTCCTTTAGATGGAAATATCGGTTGTATGGTTAATGGTGCAGGTTTAGCGATGG
CTACGATGGATATCATTAAACATTACCATGGCGATCCAGCTAACTTCTTAGATGTTGGTGGCGGTGCGACAGCTGAAAAA
GTTACAGAAGCATTTAAAATTATCCTTTCTGACAAAAATGTAAAAGGTATCTTCGTTAACATTTTTGGTGGCATTATGAA
GTGTGATGTTATTGCAGAAGGTGTTATTGAAGCAACGAAACAAGTAGGTCTTGAATTGCCTTTAGTTGTACGTCTTGAAG
GTACAAACGTTGAGTTAGGTAAGAAAATTTTAAATGAGTCTGGCTTAAATATTGTTGCAGCAGAATCTATGGCAGACGGT
GCACAAAAAATTGTTTCACTAGTGGGCTAA

Upstream 100 bases:

>100_bases
TACCGTGCGTTTATCGAAAAAGATTGTTCTATCGCAGAGATTAATCCACTTGTTACAACAGGTGACGGTAAAGTTATGGC
ATTAGATGCGAAATTAAACT

Downstream 100 bases:

>100_bases
TAGAAAGCGGGGGAGAAAAAATGAGCGTATTAGTTAATAAAGATACAAAAGTTATTGTTCAAGGTATTACAGGTTCTCAA
GGATTATTCCACACAAAACA

Product: succinate-CoA ligase (ADP-forming), beta subunit

Products: NA

Alternate protein names: Succinyl-CoA synthetase subunit beta; SCS-beta [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MILTLYIAIKTFLELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEK
VTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADG
AQKIVSLVG

Sequences:

>Translated_169_residues
MILTLYIAIKTFLELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEK
VTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADG
AQKIVSLVG
>Mature_169_residues
MILTLYIAIKTFLELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIKHYHGDPANFLDVGGGATAEK
VTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATKQVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADG
AQKIVSLVG

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0045

COG function: function code C; Succinyl-CoA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI11321583, Length=158, Percent_Identity=57.5949367088608, Blast_Score=188, Evalue=2e-48,
Organism=Homo sapiens, GI157779135, Length=150, Percent_Identity=54.6666666666667, Blast_Score=160, Evalue=4e-40,
Organism=Homo sapiens, GI294862256, Length=129, Percent_Identity=55.0387596899225, Blast_Score=141, Evalue=3e-34,
Organism=Escherichia coli, GI1786948, Length=155, Percent_Identity=63.8709677419355, Blast_Score=198, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17567829, Length=157, Percent_Identity=58.5987261146497, Blast_Score=186, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI17539378, Length=157, Percent_Identity=52.2292993630573, Blast_Score=172, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6321683, Length=154, Percent_Identity=55.8441558441558, Blast_Score=189, Evalue=2e-49,
Organism=Drosophila melanogaster, GI161078106, Length=158, Percent_Identity=63.2911392405063, Blast_Score=199, Evalue=5e-52,
Organism=Drosophila melanogaster, GI24645208, Length=158, Percent_Identity=63.2911392405063, Blast_Score=199, Evalue=5e-52,
Organism=Drosophila melanogaster, GI281361397, Length=158, Percent_Identity=63.2911392405063, Blast_Score=199, Evalue=5e-52,
Organism=Drosophila melanogaster, GI281361395, Length=158, Percent_Identity=63.2911392405063, Blast_Score=199, Evalue=5e-52,
Organism=Drosophila melanogaster, GI21356231, Length=148, Percent_Identity=58.1081081081081, Blast_Score=181, Evalue=2e-46,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2361 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013650
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005811
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF00549 Ligase_CoA [H]

EC number: =6.2.1.5 [H]

Molecular weight: Translated: 18070; Mature: 18070

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTLYIAIKTFLELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIK
CEEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHH
HYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATK
HHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
QVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLVG
HCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCC
>Mature Secondary Structure
MILTLYIAIKTFLELRDLDEEDAKEIEASKYDLNYIPLDGNIGCMVNGAGLAMATMDIIK
CEEEEEHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHHHHH
HYHGDPANFLDVGGGATAEKVTEAFKIILSDKNVKGIFVNIFGGIMKCDVIAEGVIEATK
HHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH
QVGLELPLVVRLEGTNVELGKKILNESGLNIVAAESMADGAQKIVSLVG
HCCCCCCEEEEEECCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA