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The map label for this gene is sucC [H]

Identifier: 218904965

GI number: 218904965

Start: 3687753

End: 3688454

Strand: Reverse

Name: sucC [H]

Synonym: BCAH820_3849

Alternate gene names: 218904965

Gene position: 3688454-3687753 (Counterclockwise)

Preceding gene: 218904966

Following gene: 218904964

Centisome position: 69.56

GC content: 38.6

Gene sequence:

>702_bases
ATGAATATCCATGAGTACCAAGGTAAGGCAGTCCTTAGAAGCTATGGGGTTAGCGTTCCGAACGGGAAGGTTGCATTTAC
AGTAGAAGAAGCTGTAGAAGCAGCGAAAGAATTAGGAACGGAAGTATGTGTAGTAAAAGCACAAATTCACGCTGGTGGAC
GCGGCAAAGCTGGCGGAGTAAAAGTTGCAAAAAATTTAGATGAAGTTCGTACATATGCAGAGAGCATTTTAGGAACTACA
CTTGTGACACATCAAACAGGTCCTGAAGGTAAGGAAGTAAAACGCTTACTTATCGAAGAAGGTTGCGATATTAAAAAAGA
ATATTATGTAGGTCTTGTTTTAGATCGTGCAACTTCTCAAGTTGTTTTAATGGCGTCTGAAGAAGGCGGAACAGAAATTG
AAGAAGTAGCAGAAAAAACACCAGAAAAAATCTTTAAAGAATATATTGATCCAGCAGTAGGTTTACAAGGCTTCCAAGCA
CGCCGAATTGCATTTAACATCAATATTCCAAAAGAGCTTGTAGGACAAGCTGTGAAGTTTATGATGGGCTTATACCGTGC
GTTTATCGAAAAAGATTGTTCTATCGCAGAGATTAATCCACTTGTTACAACAGGTGACGGTAAAGTTATGGCATTAGATG
CGAAATTAAACTTTGATTCTAACGCTTTATATCGCCATAAAGACATTTTTAGAACTTCGTGA

Upstream 100 bases:

>100_bases
GTAGACAGCGTGCCAATCATCTTATACAATGGCAATGTAATGTTTTTTAAACATTAAAAAACTTTTCGAGTAAAACAGGA
AAACAGGGGAGGATGGGACC

Downstream 100 bases:

>100_bases
TCTTGATGAAGAAGATGCAAAAGAAATCGAAGCTTCTAAATATGACTTAAACTACATTCCTTTAGATGGAAATATCGGTT
GTATGGTTAATGGTGCAGGT

Product: succinyl-CoA synthetase beta chain

Products: NA

Alternate protein names: Succinyl-CoA synthetase subunit beta; SCS-beta [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKAGGVKVAKNLDEVRTYAESILGTT
LVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQA
RRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIFRTS

Sequences:

>Translated_233_residues
MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKAGGVKVAKNLDEVRTYAESILGTT
LVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQA
RRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIFRTS
>Mature_233_residues
MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKAGGVKVAKNLDEVRTYAESILGTT
LVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQVVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQA
RRIAFNINIPKELVGQAVKFMMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIFRTS

Specific function: Tricarboxylic acid cycle. [C]

COG id: COG0045

COG function: function code C; Succinyl-CoA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

Organism=Homo sapiens, GI157779135, Length=237, Percent_Identity=42.1940928270042, Blast_Score=179, Evalue=2e-45,
Organism=Homo sapiens, GI294862256, Length=237, Percent_Identity=42.1940928270042, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI11321583, Length=237, Percent_Identity=40.084388185654, Blast_Score=177, Evalue=9e-45,
Organism=Escherichia coli, GI1786948, Length=229, Percent_Identity=48.471615720524, Blast_Score=222, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17539378, Length=239, Percent_Identity=43.5146443514644, Blast_Score=184, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17567829, Length=235, Percent_Identity=37.0212765957447, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6321683, Length=240, Percent_Identity=38.75, Blast_Score=162, Evalue=3e-41,
Organism=Drosophila melanogaster, GI161078106, Length=237, Percent_Identity=35.0210970464135, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24645208, Length=237, Percent_Identity=35.0210970464135, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI21356231, Length=237, Percent_Identity=37.1308016877637, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI281361397, Length=238, Percent_Identity=35.2941176470588, Blast_Score=140, Evalue=6e-34,
Organism=Drosophila melanogaster, GI281361395, Length=238, Percent_Identity=35.2941176470588, Blast_Score=140, Evalue=6e-34,

Paralogues:

None

Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2361 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 3,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013650
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005811
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF00549 Ligase_CoA [H]

EC number: =6.2.1.5 [H]

Molecular weight: Translated: 25498; Mature: 25498

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKAGGV
CCCCHHCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCH
KVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQ
HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCHHHEEEEEEECCCCE
VVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKF
EEEEECCCCCCHHHHHHHHCHHHHHHHHCCHHCCCCCCEEEEEEEECCCCHHHHHHHHHH
MMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIFRTS
HHHHHHHHHHCCCCEEECCCEEECCCCEEEEEEEEECCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNIHEYQGKAVLRSYGVSVPNGKVAFTVEEAVEAAKELGTEVCVVKAQIHAGGRGKAGGV
CCCCHHCCHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCH
KVAKNLDEVRTYAESILGTTLVTHQTGPEGKEVKRLLIEEGCDIKKEYYVGLVLDRATSQ
HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCCCHHHEEEEEEECCCCE
VVLMASEEGGTEIEEVAEKTPEKIFKEYIDPAVGLQGFQARRIAFNINIPKELVGQAVKF
EEEEECCCCCCHHHHHHHHCHHHHHHHHCCHHCCCCCCEEEEEEEECCCCHHHHHHHHHH
MMGLYRAFIEKDCSIAEINPLVTTGDGKVMALDAKLNFDSNALYRHKDIFRTS
HHHHHHHHHHCCCCEEECCCEEECCCCEEEEEEEEECCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA