Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884772

Identifier: 218884772

GI number: 218884772

Start: 1353610

End: 1354233

Strand: Direct

Name: 218884772

Synonym: DKAM_1461

Alternate gene names: NA

Gene position: 1353610-1354233 (Clockwise)

Preceding gene: 218884770

Following gene: 218884776

Centisome position: 99.15

GC content: 45.03

Gene sequence:

>624_bases
ATGAGCTATAGAAGAGAGGAAACTGTTGGGGAGAAATTAAGGAAATTGTTCACAAATGATAAGGACCCAGTTGAGAAGAA
GGCTATAATCGCCCAGTACAGAATAAAGACTGCGATAGGTAGGATAAACAACTACCTTGAAAAACTCTCTGAAAGAGACC
GTGAATTATTTGAAATGATAGTTGAATCACTTACGAGGAAAGACGAGTTAAGGGCTAAAATGTACGCCAAGGAGGTAGCT
GAAATAAGGAAGGTCAGTAAGCAATTACTCACCGTACAGTATGCATTAGAGCATGCCGCGTTAAAGCTTGAGACATTCAT
AATATATGGTGGCGCTGTGAATGAGGTTGCACCGGTACTCGGTGTTATGAAGGAAGCGGTGAACATATTGAGGGGTGTGG
CACCAGATATATGGATCGACCTACAGTACGCTGTGAGGGAACTAGAGACAGCCGTAGGCGCTGGAATCGTAGACTTAACC
ACGGATATAGGAGTAGGTATGGACAGCGAGGCGAAGAAGGTATTAGAGGAGGCGAAGATCGTAGCAGAGCAGAAGATGAA
GGAGAAGTTCGCGGAGCTACCGAAGACTATCGTTCCAGAGGGAGAAAGCGTAAAGAGCAGCTAG

Upstream 100 bases:

>100_bases
AAATGTTTTCACCGGGAAAATCGGGCATGCCTCTTTTGTTACAAGGGATCCCAGGGTTTAAAAATAAATAATTGTGCATA
AGCGTGATGGGGGAAATCTA

Downstream 100 bases:

>100_bases
CCGGCTTTTTTACTTACATACTGTTCAATTAACTGTGATACTTTAAGGTCTATGTTTTTTCCGAGTACTCTTAGGGCATT
TACTAGTTCATCTCTCTTTG

Product: Conserved protein implicated in secretion

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSYRREETVGEKLRKLFTNDKDPVEKKAIIAQYRIKTAIGRINNYLEKLSERDRELFEMIVESLTRKDELRAKMYAKEVA
EIRKVSKQLLTVQYALEHAALKLETFIIYGGAVNEVAPVLGVMKEAVNILRGVAPDIWIDLQYAVRELETAVGAGIVDLT
TDIGVGMDSEAKKVLEEAKIVAEQKMKEKFAELPKTIVPEGESVKSS

Sequences:

>Translated_207_residues
MSYRREETVGEKLRKLFTNDKDPVEKKAIIAQYRIKTAIGRINNYLEKLSERDRELFEMIVESLTRKDELRAKMYAKEVA
EIRKVSKQLLTVQYALEHAALKLETFIIYGGAVNEVAPVLGVMKEAVNILRGVAPDIWIDLQYAVRELETAVGAGIVDLT
TDIGVGMDSEAKKVLEEAKIVAEQKMKEKFAELPKTIVPEGESVKSS
>Mature_206_residues
SYRREETVGEKLRKLFTNDKDPVEKKAIIAQYRIKTAIGRINNYLEKLSERDRELFEMIVESLTRKDELRAKMYAKEVAE
IRKVSKQLLTVQYALEHAALKLETFIIYGGAVNEVAPVLGVMKEAVNILRGVAPDIWIDLQYAVRELETAVGAGIVDLTT
DIGVGMDSEAKKVLEEAKIVAEQKMKEKFAELPKTIVPEGESVKSS

Specific function: Unknown

COG id: COG5491

COG function: function code N; Conserved protein implicated in secretion

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23343; Mature: 23212

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRREETVGEKLRKLFTNDKDPVEKKAIIAQYRIKTAIGRINNYLEKLSERDRELFEMI
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VESLTRKDELRAKMYAKEVAEIRKVSKQLLTVQYALEHAALKLETFIIYGGAVNEVAPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
GVMKEAVNILRGVAPDIWIDLQYAVRELETAVGAGIVDLTTDIGVGMDSEAKKVLEEAKI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH
VAEQKMKEKFAELPKTIVPEGESVKSS
HHHHHHHHHHHHCCHHHCCCCCCCCCC
>Mature Secondary Structure 
SYRREETVGEKLRKLFTNDKDPVEKKAIIAQYRIKTAIGRINNYLEKLSERDRELFEMI
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VESLTRKDELRAKMYAKEVAEIRKVSKQLLTVQYALEHAALKLETFIIYGGAVNEVAPVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
GVMKEAVNILRGVAPDIWIDLQYAVRELETAVGAGIVDLTTDIGVGMDSEAKKVLEEAKI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHH
VAEQKMKEKFAELPKTIVPEGESVKSS
HHHHHHHHHHHHCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA