Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884770

Identifier: 218884770

GI number: 218884770

Start: 1352322

End: 1353005

Strand: Direct

Name: 218884770

Synonym: DKAM_1459

Alternate gene names: NA

Gene position: 1352322-1353005 (Clockwise)

Preceding gene: 218884767

Following gene: 218884772

Centisome position: 99.06

GC content: 42.84

Gene sequence:

>684_bases
ATGCCTCGATACACTATTATAAAACTCAGAGAGCTCCATAGATACCTCAACAATAAGAAGTATTCCGAGAAAATCCGTTA
CCTACTAGAATATGGTTACAATGTTCACTCCATTATTAATAGGGTTCTCCAATCCTATGGGGGAATAGTGTTCAACCTCG
ATACTGGCGAATATATCGCGTTAACTAATGGAATAGGTGAAGACATACATAGGGAATTACTAATTGAACTAGATAGGGAG
ACCATACACGGGGTTCAAATGGCCTCTGTGACGGCTTCGAACCCGTTAACAGCTTTACTGGGTGCATCAATATATTTCAG
TAAAGGCCATAGGTTCGTGTTTGAGGAGGAAGCAGGGAGTAGAGACGAGTACTGGGTTGCATCAATACAGCTACCATTAT
TCTCCAGCAGCTACGATGCATACATAGTGTATAACTCACTGTATAACTCGATTCATAGGGCGGCAGAGAAGTATGGGGGG
CTACTTGTTGAGAAAACAACTGGATTAGTAACTATTGTTGGAGGTAAGGAACTCGGGTCCCTAGTTAATGAGTTATCAAG
TATAGGGTTTGTTGGGGTAGGGGTGTCTCCCATCGGCCGTAACGCGTATAGGAATGCTTTTAAGGCGCTTCAACTCCTAA
TTGATGGAGTCGTAGATGGGAGGTTACATATCATACAGGGATGA

Upstream 100 bases:

>100_bases
GCTACATATTACGCCGAATATGCCTCCCATACTAAAGCACCGTTTTAATAATTCGATTCTCTATTTATATTAATTTAGCT
AGAGTACGGGAGAACGCGTC

Downstream 100 bases:

>100_bases
GGGTTTCAACGTGGTGAAGGATTCTAAAGTCTAAAGTCATCAGCTCTGGGGCCCGTTCATCGCTTGGCTCACCGGTAATA
CCATTCATCACGAGATAAAT

Product: GTP cyclohydrolase III

Products: NA

Alternate protein names: GTP Cyclohydrolase IIA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MPRYTIIKLRELHRYLNNKKYSEKIRYLLEYGYNVHSIINRVLQSYGGIVFNLDTGEYIALTNGIGEDIHRELLIELDRE
TIHGVQMASVTASNPLTALLGASIYFSKGHRFVFEEEAGSRDEYWVASIQLPLFSSSYDAYIVYNSLYNSIHRAAEKYGG
LLVEKTTGLVTIVGGKELGSLVNELSSIGFVGVGVSPIGRNAYRNAFKALQLLIDGVVDGRLHIIQG

Sequences:

>Translated_227_residues
MPRYTIIKLRELHRYLNNKKYSEKIRYLLEYGYNVHSIINRVLQSYGGIVFNLDTGEYIALTNGIGEDIHRELLIELDRE
TIHGVQMASVTASNPLTALLGASIYFSKGHRFVFEEEAGSRDEYWVASIQLPLFSSSYDAYIVYNSLYNSIHRAAEKYGG
LLVEKTTGLVTIVGGKELGSLVNELSSIGFVGVGVSPIGRNAYRNAFKALQLLIDGVVDGRLHIIQG
>Mature_226_residues
PRYTIIKLRELHRYLNNKKYSEKIRYLLEYGYNVHSIINRVLQSYGGIVFNLDTGEYIALTNGIGEDIHRELLIELDRET
IHGVQMASVTASNPLTALLGASIYFSKGHRFVFEEEAGSRDEYWVASIQLPLFSSSYDAYIVYNSLYNSIHRAAEKYGGL
LVEKTTGLVTIVGGKELGSLVNELSSIGFVGVGVSPIGRNAYRNAFKALQLLIDGVVDGRLHIIQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25352; Mature: 25221

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYTIIKLRELHRYLNNKKYSEKIRYLLEYGYNVHSIINRVLQSYGGIVFNLDTGEYIA
CCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCEEE
LTNGIGEDIHRELLIELDRETIHGVQMASVTASNPLTALLGASIYFSKGHRFVFEEEAGS
EECCCCHHHHHHHHHHHCHHHHCCEEEEEEECCCCHHHHHHCCEEEECCCEEEEECCCCC
RDEYWVASIQLPLFSSSYDAYIVYNSLYNSIHRAAEKYGGLLVEKTTGLVTIVGGKELGS
CCCEEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCHHHHH
LVNELSSIGFVGVGVSPIGRNAYRNAFKALQLLIDGVVDGRLHIIQG
HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC
>Mature Secondary Structure 
PRYTIIKLRELHRYLNNKKYSEKIRYLLEYGYNVHSIINRVLQSYGGIVFNLDTGEYIA
CCEEEHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCEEE
LTNGIGEDIHRELLIELDRETIHGVQMASVTASNPLTALLGASIYFSKGHRFVFEEEAGS
EECCCCHHHHHHHHHHHCHHHHCCEEEEEEECCCCHHHHHHCCEEEECCCEEEEECCCCC
RDEYWVASIQLPLFSSSYDAYIVYNSLYNSIHRAAEKYGGLLVEKTTGLVTIVGGKELGS
CCCEEEEEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCHHHHH
LVNELSSIGFVGVGVSPIGRNAYRNAFKALQLLIDGVVDGRLHIIQG
HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA