| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884695
Identifier: 218884695
GI number: 218884695
Start: 1289048
End: 1289629
Strand: Direct
Name: 218884695
Synonym: DKAM_1384
Alternate gene names: NA
Gene position: 1289048-1289629 (Clockwise)
Preceding gene: 218884693
Following gene: 218884696
Centisome position: 94.42
GC content: 49.31
Gene sequence:
>582_bases ATGGGTAAGATAATAGTGGTAGCTGGGGTACCTGGTACAGGGAAGACCAGTGTATCAAGGGAGCTGGCCTCCCTGACGGG GTTTCAGCTAATCGAGCTTGGGAGGTATGCCTTGGAGAGGGGGCTAGTTACCGGTTTCGACGATGAGAGGGGTAGCTATG TGATAGATGAGGATGCTTTGTCGCGTGAGGTGTCAATGCTTGCTGGGAATAGTGAAGGCCATATCATAGTTAGCACCCAT TACCCTGAGATCCTGGATCCCAGTGTAGTTGAAAAAGTATTCGTGCTGAGAACACATCCCCTGGTACTGGAGAAGAGGCT TGAGTCGAGGGGGTGGGATAGGAGGAAGATCAATGAGAACGTGATGGCCGAGATACTTGGTGTCGTATCATATAATGCGT TAACAGTGTTCGGTGAGGAAAAAATATATGAGATCGATACATCTAACACTACACCAGGCGAGGTAGCAGGGCTCGTAGCC GATATACTAAGCAATAAGACTGTTATCCCCCCAGGCATCAGAATAGACTGGCTCTCAGTACTCCCAGCCGAGGAGTTATC GAGGTTTGAGAGCTATGAGTAG
Upstream 100 bases:
>100_bases CTATAAACATGTTATAACGGGATCCCTATTTAAAAACTTGGCTGGCTCCAGGTTCGTGTTATAATAAGGGCAACTTCGCT AATAAACCAGGGGTGTTTAA
Downstream 100 bases:
>100_bases GGGAGGATTCATACTAGCGTCGTGGAGCCAGCTAGATAGAATGATCTCCAGGGTAGACGTCGTCTTAATGGTGCTGGATG CAAGGGATCCCTTAGGCACG
Product: putative nucleotide kinase
Products: NA
Alternate protein names: ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGKIIVVAGVPGTGKTSVSRELASLTGFQLIELGRYALERGLVTGFDDERGSYVIDEDALSREVSMLAGNSEGHIIVSTH YPEILDPSVVEKVFVLRTHPLVLEKRLESRGWDRRKINENVMAEILGVVSYNALTVFGEEKIYEIDTSNTTPGEVAGLVA DILSNKTVIPPGIRIDWLSVLPAEELSRFESYE
Sequences:
>Translated_193_residues MGKIIVVAGVPGTGKTSVSRELASLTGFQLIELGRYALERGLVTGFDDERGSYVIDEDALSREVSMLAGNSEGHIIVSTH YPEILDPSVVEKVFVLRTHPLVLEKRLESRGWDRRKINENVMAEILGVVSYNALTVFGEEKIYEIDTSNTTPGEVAGLVA DILSNKTVIPPGIRIDWLSVLPAEELSRFESYE >Mature_192_residues GKIIVVAGVPGTGKTSVSRELASLTGFQLIELGRYALERGLVTGFDDERGSYVIDEDALSREVSMLAGNSEGHIIVSTHY PEILDPSVVEKVFVLRTHPLVLEKRLESRGWDRRKINENVMAEILGVVSYNALTVFGEEKIYEIDTSNTTPGEVAGLVAD ILSNKTVIPPGIRIDWLSVLPAEELSRFESYE
Specific function: Unknown
COG id: COG1936
COG function: function code F; Predicted nucleotide kinase (related to CMP and AMP kinases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family. AK6 subfamily [H]
Homologues:
Organism=Homo sapiens, GI7706212, Length=160, Percent_Identity=34.375, Blast_Score=93, Evalue=1e-19, Organism=Homo sapiens, GI62865612, Length=156, Percent_Identity=34.6153846153846, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17532769, Length=150, Percent_Identity=34, Blast_Score=87, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6320035, Length=162, Percent_Identity=31.4814814814815, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020618 [H]
Pfam domain/function: NA
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 21247; Mature: 21116
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIIVVAGVPGTGKTSVSRELASLTGFQLIELGRYALERGLVTGFDDERGSYVIDEDAL CCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHH SREVSMLAGNSEGHIIVSTHYPEILDPSVVEKVFVLRTHPLVLEKRLESRGWDRRKINEN HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH VMAEILGVVSYNALTVFGEEKIYEIDTSNTTPGEVAGLVADILSNKTVIPPGIRIDWLSV HHHHHHHHHHCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCEECCCCCEEEHEEC LPAEELSRFESYE CCHHHHHHHCCCC >Mature Secondary Structure GKIIVVAGVPGTGKTSVSRELASLTGFQLIELGRYALERGLVTGFDDERGSYVIDEDAL CCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHH SREVSMLAGNSEGHIIVSTHYPEILDPSVVEKVFVLRTHPLVLEKRLESRGWDRRKINEN HHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH VMAEILGVVSYNALTVFGEEKIYEIDTSNTTPGEVAGLVADILSNKTVIPPGIRIDWLSV HHHHHHHHHHCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCEECCCCCEEEHEEC LPAEELSRFESYE CCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA