| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884588
Identifier: 218884588
GI number: 218884588
Start: 1198154
End: 1198660
Strand: Direct
Name: 218884588
Synonym: DKAM_1277
Alternate gene names: NA
Gene position: 1198154-1198660 (Clockwise)
Preceding gene: 218884587
Following gene: 218884589
Centisome position: 87.76
GC content: 45.76
Gene sequence:
>507_bases TTGAGAAAGAGTAGGAAGACCATCGGCATCGACGCGGAATATATTGAAGCGCTTAAGGAGGTGGCGAGGAAGAGGGGGAC CAGTATATCAGGCTATATGAGGCAACTAATAGATGAAGCATTGAAAATAGAGTCAATGGGCTACTATGCCCCCAGGGCTT TAATGGAGAGGTGGGTAGAGCTCGTCTTATCAAAAGTTGGATTCGCATATATGCACGTGGATATATTGGAGCTTGAGGAC CTTGAGGAGATAGAGAGGAGAGGGGAGATACTCGGCTCAACGATAGCTGAGCTAGGTGTGGATTCAATGAAGATCATAGA GTTGCTGGGATTAAGTAGTGGTGTGGGTATTTCGCAGGGTTCCTCGATAATTCTACTACCGCAGAGTAGTAGGGTGAAGA CTAAGATGTTTCACTTGATCAAGGGGTTGGCTAAGGGCTCAGGCCTTGTAATTTCCTCTAGCGGGAGCCTAGTAATAATA TCTCCACCTAGGAAAACAATAATCTAA
Upstream 100 bases:
>100_bases CTTGAAAAAATATTGAGTAGTATGGCAGCCGGCTACGATCTTAAAATACTTGATCTAACAGTAAACATCAATACCGTGGT TGTGAAGGTGACCGGGTTCC
Downstream 100 bases:
>100_bases CACCTTGTCAATGCAACTACACAGAGGGAATATTTCCCAGTACAACCAGGGGGTTCAGGTCTCATATAGGTTTATTTAAA TTGGTTTCATCCCCTCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRKSRKTIGIDAEYIEALKEVARKRGTSISGYMRQLIDEALKIESMGYYAPRALMERWVELVLSKVGFAYMHVDILELED LEEIERRGEILGSTIAELGVDSMKIIELLGLSSGVGISQGSSIILLPQSSRVKTKMFHLIKGLAKGSGLVISSSGSLVII SPPRKTII
Sequences:
>Translated_168_residues MRKSRKTIGIDAEYIEALKEVARKRGTSISGYMRQLIDEALKIESMGYYAPRALMERWVELVLSKVGFAYMHVDILELED LEEIERRGEILGSTIAELGVDSMKIIELLGLSSGVGISQGSSIILLPQSSRVKTKMFHLIKGLAKGSGLVISSSGSLVII SPPRKTII >Mature_168_residues MRKSRKTIGIDAEYIEALKEVARKRGTSISGYMRQLIDEALKIESMGYYAPRALMERWVELVLSKVGFAYMHVDILELED LEEIERRGEILGSTIAELGVDSMKIIELLGLSSGVGISQGSSIILLPQSSRVKTKMFHLIKGLAKGSGLVISSSGSLVII SPPRKTII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18479; Mature: 18479
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSRKTIGIDAEYIEALKEVARKRGTSISGYMRQLIDEALKIESMGYYAPRALMERWVE CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LVLSKVGFAYMHVDILELEDLEEIERRGEILGSTIAELGVDSMKIIELLGLSSGVGISQG HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC SSIILLPQSSRVKTKMFHLIKGLAKGSGLVISSSGSLVIISPPRKTII CEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCHHCCC >Mature Secondary Structure MRKSRKTIGIDAEYIEALKEVARKRGTSISGYMRQLIDEALKIESMGYYAPRALMERWVE CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LVLSKVGFAYMHVDILELEDLEEIERRGEILGSTIAELGVDSMKIIELLGLSSGVGISQG HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC SSIILLPQSSRVKTKMFHLIKGLAKGSGLVISSSGSLVIISPPRKTII CEEEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA