| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884587
Identifier: 218884587
GI number: 218884587
Start: 1197580
End: 1198167
Strand: Direct
Name: 218884587
Synonym: DKAM_1276
Alternate gene names: NA
Gene position: 1197580-1198167 (Clockwise)
Preceding gene: 218884586
Following gene: 218884588
Centisome position: 87.72
GC content: 45.07
Gene sequence:
>588_bases ATGTCAAGGGAGATTAGAAGGAGATTTGTGCCGATCTCTGATGAAATCATACAGGAGGCGCTTGATGTTGCTGAGAGGTA TGGTATGCCTTACAGTGTGATCATAGAGAAGTCTCTCGAGGGATTATTGAAGATAATGAAGTATAAGTCATCCATACTGG AGAGCATAGTCCTCGTCGATGCGGTGGATGATTTAAGAAGGCTTGGACTAGTATTCCTGCCCATGAGTATAGCGAGGAAG ATCCTAGATGACCTCGATGAAGCCTTATTTAATCAGTTGCTAGAGGAGTTATCGAGATCATCTAGGTGGTTTGGTGAGCT AAGCAGGGTTAAACGGGGTAGTTCCCCGAGGGAGTTCCAGACCTCTCTATCCCTCTGGATGCCGATGACAACTATCGATG TGGTGAAGGAGAGTGAAGAGGTATATAGGTTCGTGATCTCCATAGCTGATGCATCACCCAGGTTAATGCGCGTGCTTGAA AAAATATTGAGTAGTATGGCAGCCGGCTACGATCTTAAAATACTTGATCTAACAGTAAACATCAATACCGTGGTTGTGAA GGTGACCGGGTTCCTTGAGAAAGAGTAG
Upstream 100 bases:
>100_bases CCTCAAAAATCCCTGCGAGAACCCTCGCTCTTTAGGGCGGGAAGGAGGTCAGTTTTTATCTTTCCCAGTAATAATTTAAC ATGATTGCTTGGTGAATCCA
Downstream 100 bases:
>100_bases GAAGACCATCGGCATCGACGCGGAATATATTGAAGCGCTTAAGGAGGTGGCGAGGAAGAGGGGGACCAGTATATCAGGCT ATATGAGGCAACTAATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSREIRRRFVPISDEIIQEALDVAERYGMPYSVIIEKSLEGLLKIMKYKSSILESIVLVDAVDDLRRLGLVFLPMSIARK ILDDLDEALFNQLLEELSRSSRWFGELSRVKRGSSPREFQTSLSLWMPMTTIDVVKESEEVYRFVISIADASPRLMRVLE KILSSMAAGYDLKILDLTVNINTVVVKVTGFLEKE
Sequences:
>Translated_195_residues MSREIRRRFVPISDEIIQEALDVAERYGMPYSVIIEKSLEGLLKIMKYKSSILESIVLVDAVDDLRRLGLVFLPMSIARK ILDDLDEALFNQLLEELSRSSRWFGELSRVKRGSSPREFQTSLSLWMPMTTIDVVKESEEVYRFVISIADASPRLMRVLE KILSSMAAGYDLKILDLTVNINTVVVKVTGFLEKE >Mature_194_residues SREIRRRFVPISDEIIQEALDVAERYGMPYSVIIEKSLEGLLKIMKYKSSILESIVLVDAVDDLRRLGLVFLPMSIARKI LDDLDEALFNQLLEELSRSSRWFGELSRVKRGSSPREFQTSLSLWMPMTTIDVVKESEEVYRFVISIADASPRLMRVLEK ILSSMAAGYDLKILDLTVNINTVVVKVTGFLEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22335; Mature: 22203
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREIRRRFVPISDEIIQEALDVAERYGMPYSVIIEKSLEGLLKIMKYKSSILESIVLVD CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVDDLRRLGLVFLPMSIARKILDDLDEALFNQLLEELSRSSRWFGELSRVKRGSSPREFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH TSLSLWMPMTTIDVVKESEEVYRFVISIADASPRLMRVLEKILSSMAAGYDLKILDLTVN HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEE INTVVVKVTGFLEKE CCEEEEEEECHHCCC >Mature Secondary Structure SREIRRRFVPISDEIIQEALDVAERYGMPYSVIIEKSLEGLLKIMKYKSSILESIVLVD CHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVDDLRRLGLVFLPMSIARKILDDLDEALFNQLLEELSRSSRWFGELSRVKRGSSPREFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH TSLSLWMPMTTIDVVKESEEVYRFVISIADASPRLMRVLEKILSSMAAGYDLKILDLTVN HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEE INTVVVKVTGFLEKE CCEEEEEEECHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA