Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884578
Identifier: 218884578
GI number: 218884578
Start: 1185378
End: 1185659
Strand: Direct
Name: 218884578
Synonym: DKAM_1267
Alternate gene names: NA
Gene position: 1185378-1185659 (Clockwise)
Preceding gene: 218884574
Following gene: 218884580
Centisome position: 86.83
GC content: 42.91
Gene sequence:
>282_bases GTGAGCGGCTTGTGGACACTTATATTAAGGATTGAAAGCAAGGGATGCGCCGGCTGTATCACAACAGCCCTCACACACCT CTTCAAGATAAAGGGGGTCTCCGGCGTCAAGGTGCGTGGAAGAGAGATACTCGTCCTCCTAAATGATAAAAATCTCGTGG ATAACGTGTTGAATAATCCATCTTTGAGAGAATACTATGTTATTAAGGAATGGAGCATTGTCGAAGGGGATATCTTAGAT AATCGATTAAGGTTCGCCCTTCAATCAAATACAAAGGTTTAA
Upstream 100 bases:
>100_bases TATTTCCATTTAAGGGGGTTATATTCTGATTTAAATCAATGAATCCCTGTATATATCTCTCGTATTTTTTAAGGCTGTAA TGGGCTTGAAGTAATAATAG
Downstream 100 bases:
>100_bases AGAAGAACTTGGATTAAAAGTCGGTTGTAAAAGTAAACGAGTTTATATGGCTGCTAGTATTCATGGTTAATCTATTGGAA GATTAATGGGACCTCCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSGLWTLILRIESKGCAGCITTALTHLFKIKGVSGVKVRGREILVLLNDKNLVDNVLNNPSLREYYVIKEWSIVEGDILD NRLRFALQSNTKV
Sequences:
>Translated_93_residues MSGLWTLILRIESKGCAGCITTALTHLFKIKGVSGVKVRGREILVLLNDKNLVDNVLNNPSLREYYVIKEWSIVEGDILD NRLRFALQSNTKV >Mature_92_residues SGLWTLILRIESKGCAGCITTALTHLFKIKGVSGVKVRGREILVLLNDKNLVDNVLNNPSLREYYVIKEWSIVEGDILDN RLRFALQSNTKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10472; Mature: 10341
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLWTLILRIESKGCAGCITTALTHLFKIKGVSGVKVRGREILVLLNDKNLVDNVLNNP CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCHHHHHHCCC SLREYYVIKEWSIVEGDILDNRLRFALQSNTKV CCCEEEEEECCCEEECCCCCCHHEEEECCCCCC >Mature Secondary Structure SGLWTLILRIESKGCAGCITTALTHLFKIKGVSGVKVRGREILVLLNDKNLVDNVLNNP CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCHHHHHHCCC SLREYYVIKEWSIVEGDILDNRLRFALQSNTKV CCCEEEEEECCCEEECCCCCCHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA