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The map label for this gene is 218884580

Identifier: 218884580

GI number: 218884580

Start: 1187065

End: 1187565

Strand: Direct

Name: 218884580

Synonym: DKAM_1269

Alternate gene names: NA

Gene position: 1187065-1187565 (Clockwise)

Preceding gene: 218884578

Following gene: 218884581

Centisome position: 86.95

GC content: 47.7

Gene sequence:

>501_bases
GTGGCAATGATGTCTTGCTACTGTGAAATATGTGGAAAAGAAGTAGAGAAGAACCAGTGTAGGAAAATAGTTATTGAAGG
TAGCATCCTTAATGTATGCCCTCAGTGCTATAACAGGTTGATCACGCAGGGTAAAGCTAGACCCTATGTTGAGGAGAGAA
AGGAGCGTCAACCGGCCCCTAAGCAGGTGGCTAAACCCGTCAAACCAAGGGTGAGGGAGGAGTATGAAGTAGTCGAGGAC
TATGCTAGGAGGGTCAGGGAGGCTAGGGAGAGGCTTGGGTGGACGCAGCAGGTTCTTGCTCAAAAAGTAAGGGAGAGTGA
GAACATTATTAAGAGGATTGAGTCTGGTAGACTGAAGCCCGGCATAGATCTAGCTAGGAGACTTGAGAAGGTGCTTGGTA
TAAAACTACTTGAGCCAGTAGTCGAGGAAAACGTGTCGTCGAATCATGAGAGCAGCGAGGACTTAACAATAGGCGACCTC
ATCAGGTTTAAACGGGAGTAG

Upstream 100 bases:

>100_bases
AACCCCTCATATAATGCCCTCATGAAACAAATTTAAATCGTAGAGCATTAATGCAATGGTTTAATGAATTATAATCCTAG
TATAGTGTTAAAGAAGATGG

Downstream 100 bases:

>100_bases
GGGTGTCCGGGAAGTATTGAGGGTTGTCGTGGTAGTACCGAGGAAATATTGGGTTTTCCTCGAGGAGGAGCTGGGACTAG
TTAAAACCATTTACAGTGAC

Product: putative transcription factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAMMSCYCEICGKEVEKNQCRKIVIEGSILNVCPQCYNRLITQGKARPYVEERKERQPAPKQVAKPVKPRVREEYEVVED
YARRVREARERLGWTQQVLAQKVRESENIIKRIESGRLKPGIDLARRLEKVLGIKLLEPVVEENVSSNHESSEDLTIGDL
IRFKRE

Sequences:

>Translated_166_residues
MAMMSCYCEICGKEVEKNQCRKIVIEGSILNVCPQCYNRLITQGKARPYVEERKERQPAPKQVAKPVKPRVREEYEVVED
YARRVREARERLGWTQQVLAQKVRESENIIKRIESGRLKPGIDLARRLEKVLGIKLLEPVVEENVSSNHESSEDLTIGDL
IRFKRE
>Mature_165_residues
AMMSCYCEICGKEVEKNQCRKIVIEGSILNVCPQCYNRLITQGKARPYVEERKERQPAPKQVAKPVKPRVREEYEVVEDY
ARRVREARERLGWTQQVLAQKVRESENIIKRIESGRLKPGIDLARRLEKVLGIKLLEPVVEENVSSNHESSEDLTIGDLI
RFKRE

Specific function: Unknown

COG id: COG1813

COG function: function code K; Predicted transcription factor, homolog of eukaryotic MBF1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004451
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 19323; Mature: 19191

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMMSCYCEICGKEVEKNQCRKIVIEGSILNVCPQCYNRLITQGKARPYVEERKERQPAP
CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH
KQVAKPVKPRVREEYEVVEDYARRVREARERLGWTQQVLAQKVRESENIIKRIESGRLKP
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GIDLARRLEKVLGIKLLEPVVEENVSSNHESSEDLTIGDLIRFKRE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AMMSCYCEICGKEVEKNQCRKIVIEGSILNVCPQCYNRLITQGKARPYVEERKERQPAP
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCH
KQVAKPVKPRVREEYEVVEDYARRVREARERLGWTQQVLAQKVRESENIIKRIESGRLKP
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GIDLARRLEKVLGIKLLEPVVEENVSSNHESSEDLTIGDLIRFKRE
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]