| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884377
Identifier: 218884377
GI number: 218884377
Start: 1010301
End: 1011302
Strand: Direct
Name: 218884377
Synonym: DKAM_1066
Alternate gene names: NA
Gene position: 1010301-1011302 (Clockwise)
Preceding gene: 218884374
Following gene: 218884378
Centisome position: 74.0
GC content: 44.71
Gene sequence:
>1002_bases ATGGAGCAGGGAACCAGCGTCCTCTGTATAAGCATTGATAAACACCTAGCTGAGCCGGTGATCAGGAGGCTCAGGGAGAA GGACTTGATTAACGCGGATTATCTTATAACTAGAATCAATGGCAATGTTATAATACCTGTGAAAACGCTGGAAGGCTTGA ACGAGTTGCTCAGTAATACTCGATACTACATCATACAGTGTAATCCGCCGCCAAGCCGGAGAAAATATGTTACACGGGTA CCATCATACGATCTCGTAGGGGATGCAGCCATTATCAGAGAAAACGTGCTGGGCTTTATGAGTGGAGATGAAGTAGTCAG GGAGCTGAGAAGCATTCATCCAAATATTAGAGCCATATATGTTAAAGAAGAGACGGTGGATAAATACAGGATACCTAAGC TGAGACTCCTATGGGGCGAGCACATTGATACTGTAGTGGTAAAGGAGTACGGGCTCTTGTTCAAGGTTTCCCTGGGGAAA GTATACTATAACCCAAGGCTCGGGGAGGAGCATCATAGAATAGCGTTGATGGTTAGAAATGGGGAGCTAGTCGTGGATCT CTTCACAGGTATTGGAGGATTCCCCATACATATATCATCCCTTAAAGCAGCGAGGATTATAGCGAATGATCTCAATCCAG AGGCATATAGGCTTCTCTGTGAAAACATATTATTGAACCATAGGAGGTTAAGGGGCGGCATTATACCATTGAATCTAGAT GCAAGGGAGATAATAGATTACCTGGATATACATGGTAAAGCCGATAGAGTGATCGCCAATCTACCGAGGTGGAGTCTGGA ATTCACTAAGGTATATAATGCTGTTTTAAAGCCAGGTGGAATACTACATCTCTACATACTCACATATGACCGTGAAGCAT CAGTAATCGAGCTGGGATCGAAGCTCCCGGGCTGGAGTATTCAAGGCTCTAAATTAGTCTTGGAGTACGCCCCCAGAGCC GGCATATATAGATTCGACCTCGTCAAGCCCAAGGACATATAA
Upstream 100 bases:
>100_bases TTCATATTTCCCGCTAGTCTAAATGTATGTTGCATGGAGAAATTTAAGCATCGCCTTGAATACATATTTTAGAAATAAGT GAGAGGCCCTGGTTGATGAG
Downstream 100 bases:
>100_bases CCTTAACTCTAGCACTGTGCCAGGATCCCGCAGCATCTGAATGATTCTTCTATCTATATCCCTTGCCGCTTTATTGGCTT TAATACCTATCGTGGCTGGC
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNTRYYIIQCNPPPSRRKYVTRV PSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIYVKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGK VYYNPRLGEEHHRIALMVRNGELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGSKLPGWSIQGSKLVLEYAPRA GIYRFDLVKPKDI
Sequences:
>Translated_333_residues MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNTRYYIIQCNPPPSRRKYVTRV PSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIYVKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGK VYYNPRLGEEHHRIALMVRNGELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGSKLPGWSIQGSKLVLEYAPRA GIYRFDLVKPKDI >Mature_333_residues MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNTRYYIIQCNPPPSRRKYVTRV PSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIYVKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGK VYYNPRLGEEHHRIALMVRNGELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGSKLPGWSIQGSKLVLEYAPRA GIYRFDLVKPKDI
Specific function: Unknown
COG id: COG2520
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1557 and to yeast YHR070w [H]
Homologues:
Organism=Homo sapiens, GI145275187, Length=198, Percent_Identity=28.7878787878788, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI193207541, Length=119, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193207539, Length=119, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193207537, Length=119, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321861, Length=121, Percent_Identity=35.5371900826446, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI45551508, Length=247, Percent_Identity=29.5546558704453, Blast_Score=94, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003402 [H]
Pfam domain/function: PF02475 Met_10 [H]
EC number: NA
Molecular weight: Translated: 37979; Mature: 37979
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNT CCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEHHHHHHHHHHCCC RYYIIQCNPPPSRRKYVTRVPSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIY EEEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE VKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGKVYYNPRLGEEHHRIALMVRN EECCCCHHHCCCEEEEEECCCCCEEEEECCCEEEEEEECEEEECCCCCCCCCEEEEEEEC GELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD CCEEEEEECCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCEEEECCC AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGS HHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEECCC KLPGWSIQGSKLVLEYAPRAGIYRFDLVKPKDI CCCCCCCCCCEEEEEECCCCCEEEEECCCCCCC >Mature Secondary Structure MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNT CCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEHHHHHHHHHHCCC RYYIIQCNPPPSRRKYVTRVPSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIY EEEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE VKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGKVYYNPRLGEEHHRIALMVRN EECCCCHHHCCCEEEEEECCCCCEEEEECCCEEEEEEECEEEECCCCCCCCCEEEEEEEC GELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD CCEEEEEECCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCEEEECCC AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGS HHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEECCC KLPGWSIQGSKLVLEYAPRAGIYRFDLVKPKDI CCCCCCCCCCEEEEEECCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]