Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884377

Identifier: 218884377

GI number: 218884377

Start: 1010301

End: 1011302

Strand: Direct

Name: 218884377

Synonym: DKAM_1066

Alternate gene names: NA

Gene position: 1010301-1011302 (Clockwise)

Preceding gene: 218884374

Following gene: 218884378

Centisome position: 74.0

GC content: 44.71

Gene sequence:

>1002_bases
ATGGAGCAGGGAACCAGCGTCCTCTGTATAAGCATTGATAAACACCTAGCTGAGCCGGTGATCAGGAGGCTCAGGGAGAA
GGACTTGATTAACGCGGATTATCTTATAACTAGAATCAATGGCAATGTTATAATACCTGTGAAAACGCTGGAAGGCTTGA
ACGAGTTGCTCAGTAATACTCGATACTACATCATACAGTGTAATCCGCCGCCAAGCCGGAGAAAATATGTTACACGGGTA
CCATCATACGATCTCGTAGGGGATGCAGCCATTATCAGAGAAAACGTGCTGGGCTTTATGAGTGGAGATGAAGTAGTCAG
GGAGCTGAGAAGCATTCATCCAAATATTAGAGCCATATATGTTAAAGAAGAGACGGTGGATAAATACAGGATACCTAAGC
TGAGACTCCTATGGGGCGAGCACATTGATACTGTAGTGGTAAAGGAGTACGGGCTCTTGTTCAAGGTTTCCCTGGGGAAA
GTATACTATAACCCAAGGCTCGGGGAGGAGCATCATAGAATAGCGTTGATGGTTAGAAATGGGGAGCTAGTCGTGGATCT
CTTCACAGGTATTGGAGGATTCCCCATACATATATCATCCCTTAAAGCAGCGAGGATTATAGCGAATGATCTCAATCCAG
AGGCATATAGGCTTCTCTGTGAAAACATATTATTGAACCATAGGAGGTTAAGGGGCGGCATTATACCATTGAATCTAGAT
GCAAGGGAGATAATAGATTACCTGGATATACATGGTAAAGCCGATAGAGTGATCGCCAATCTACCGAGGTGGAGTCTGGA
ATTCACTAAGGTATATAATGCTGTTTTAAAGCCAGGTGGAATACTACATCTCTACATACTCACATATGACCGTGAAGCAT
CAGTAATCGAGCTGGGATCGAAGCTCCCGGGCTGGAGTATTCAAGGCTCTAAATTAGTCTTGGAGTACGCCCCCAGAGCC
GGCATATATAGATTCGACCTCGTCAAGCCCAAGGACATATAA

Upstream 100 bases:

>100_bases
TTCATATTTCCCGCTAGTCTAAATGTATGTTGCATGGAGAAATTTAAGCATCGCCTTGAATACATATTTTAGAAATAAGT
GAGAGGCCCTGGTTGATGAG

Downstream 100 bases:

>100_bases
CCTTAACTCTAGCACTGTGCCAGGATCCCGCAGCATCTGAATGATTCTTCTATCTATATCCCTTGCCGCTTTATTGGCTT
TAATACCTATCGTGGCTGGC

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNTRYYIIQCNPPPSRRKYVTRV
PSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIYVKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGK
VYYNPRLGEEHHRIALMVRNGELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD
AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGSKLPGWSIQGSKLVLEYAPRA
GIYRFDLVKPKDI

Sequences:

>Translated_333_residues
MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNTRYYIIQCNPPPSRRKYVTRV
PSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIYVKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGK
VYYNPRLGEEHHRIALMVRNGELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD
AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGSKLPGWSIQGSKLVLEYAPRA
GIYRFDLVKPKDI
>Mature_333_residues
MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNTRYYIIQCNPPPSRRKYVTRV
PSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIYVKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGK
VYYNPRLGEEHHRIALMVRNGELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD
AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGSKLPGWSIQGSKLVLEYAPRA
GIYRFDLVKPKDI

Specific function: Unknown

COG id: COG2520

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1557 and to yeast YHR070w [H]

Homologues:

Organism=Homo sapiens, GI145275187, Length=198, Percent_Identity=28.7878787878788, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193207541, Length=119, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193207539, Length=119, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193207537, Length=119, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321861, Length=121, Percent_Identity=35.5371900826446, Blast_Score=74, Evalue=4e-14,
Organism=Drosophila melanogaster, GI45551508, Length=247, Percent_Identity=29.5546558704453, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003402 [H]

Pfam domain/function: PF02475 Met_10 [H]

EC number: NA

Molecular weight: Translated: 37979; Mature: 37979

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNT
CCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEHHHHHHHHHHCCC
RYYIIQCNPPPSRRKYVTRVPSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIY
EEEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE
VKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGKVYYNPRLGEEHHRIALMVRN
EECCCCHHHCCCEEEEEECCCCCEEEEECCCEEEEEEECEEEECCCCCCCCCEEEEEEEC
GELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD
CCEEEEEECCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCEEEECCC
AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGS
HHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEECCC
KLPGWSIQGSKLVLEYAPRAGIYRFDLVKPKDI
CCCCCCCCCCEEEEEECCCCCEEEEECCCCCCC
>Mature Secondary Structure
MEQGTSVLCISIDKHLAEPVIRRLREKDLINADYLITRINGNVIIPVKTLEGLNELLSNT
CCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEHHHHHHHHHHCCC
RYYIIQCNPPPSRRKYVTRVPSYDLVGDAAIIRENVLGFMSGDEVVRELRSIHPNIRAIY
EEEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE
VKEETVDKYRIPKLRLLWGEHIDTVVVKEYGLLFKVSLGKVYYNPRLGEEHHRIALMVRN
EECCCCHHHCCCEEEEEECCCCCEEEEECCCEEEEEEECEEEECCCCCCCCCEEEEEEEC
GELVVDLFTGIGGFPIHISSLKAARIIANDLNPEAYRLLCENILLNHRRLRGGIIPLNLD
CCEEEEEECCCCCCEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCEEEECCC
AREIIDYLDIHGKADRVIANLPRWSLEFTKVYNAVLKPGGILHLYILTYDREASVIELGS
HHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEECCC
KLPGWSIQGSKLVLEYAPRAGIYRFDLVKPKDI
CCCCCCCCCCEEEEEECCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]