| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884127
Identifier: 218884127
GI number: 218884127
Start: 784534
End: 784686
Strand: Direct
Name: 218884127
Synonym: DKAM_0816
Alternate gene names: NA
Gene position: 784534-784686 (Clockwise)
Preceding gene: 218884119
Following gene: 218884130
Centisome position: 57.47
GC content: 49.67
Gene sequence:
>153_bases ATGCCAAGCCATGGCTCGCTAACAAAGGCTGGGAAAGTAAGGAGTCAAACCCCTAAGATACCGCCTAAGCCGAAGAAGAA TAAACCGCCTAGGATCAGGAATAAATGGGAGTATATCAGGAGGATTGAAAGCCCGCCCAAGGAGGCTGCTTAG
Upstream 100 bases:
>100_bases ACCTTATTCATCACAATAACACCTGCCTTCCTAATTAAGAGATCAAGTAAAACCATATTTAAATATCCCTAAACTATACT ATCATGTTAGGTGGTTCAAT
Downstream 100 bases:
>100_bases AGATAAAAATTATTCTATAACGAGTTTCTTACCTAGCTTCCTACCTAGCTTAACAAGCATGTCTTTAACCATTGCCTCGA AACTCCACTCAGGCCGCCAT
Product: 30S ribosomal protein S30e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MPSHGSLTKAGKVRSQTPKIPPKPKKNKPPRIRNKWEYIRRIESPPKEAA
Sequences:
>Translated_50_residues MPSHGSLTKAGKVRSQTPKIPPKPKKNKPPRIRNKWEYIRRIESPPKEAA >Mature_49_residues PSHGSLTKAGKVRSQTPKIPPKPKKNKPPRIRNKWEYIRRIESPPKEAA
Specific function: Unknown
COG id: COG4919
COG function: function code J; Ribosomal protein S30
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5731; Mature: 5600
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHGSLTKAGKVRSQTPKIPPKPKKNKPPRIRNKWEYIRRIESPPKEAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure PSHGSLTKAGKVRSQTPKIPPKPKKNKPPRIRNKWEYIRRIESPPKEAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA