| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884119
Identifier: 218884119
GI number: 218884119
Start: 778217
End: 778864
Strand: Direct
Name: 218884119
Synonym: DKAM_0808
Alternate gene names: NA
Gene position: 778217-778864 (Clockwise)
Preceding gene: 218884118
Following gene: 218884127
Centisome position: 57.0
GC content: 45.22
Gene sequence:
>648_bases TTGCCGAGTGGATTAATAGTCTTCGATTGTGATGGTGTACTCACATACAACCATAGTAGTTGGCAGCAATTACATGAGTA CTTTGGTAGCAGAGACAATAAGTATTTCGCCGAGCTCTACGAGAGAAACCTGATAACATACCTGGATTGGATGAAGATAG ATATAGCATTAATGATACATGCATGGGGTAAGCCGATAAAGAGACGGGATGTTGAGAATGCATTATCAACCATCAGGATT AAACAGGAAGCCCCCGAGGTTATTAGGGCACTCAAGGATACCGATTACATAGTCGCTGTTGTAAGCAGCGGTATCGACAT ACTGGTTGAGAGGGTCTGCCGGGAGCTTGGAGTGGATCTCTGCCTCTACAATAAGCTTGCATTCCATAATGATGAATTAA TACCGGGTGGAGAAGCACTAGTACCATTAAGGGAGAAGCCTAGAATAGTGAAGAACCTGGCCGAATCCCTCTCGATAAGC ATCCATGAAGCATATTATGTCGGGGACAGTAAATGGGATATAGAAGTATTCAGAAACGTGGGGCACTCGATTGCTGTAAA GCCATGTGGTGAAGCCTGCGGGTTCGCCGAACACGTGGTCTCGGATCTCAGGGAGATAATAGGTATTGTTAATGGTTCCC GCGTTTAG
Upstream 100 bases:
>100_bases CGTGTTTCAAGCAGTAAGAAGGGATATAAGTTGAAGATTAATTTCACTAAGAATTACCGTGGTAGTGAAACAAGTGAATT AATGGAAGAGGTAGTGAGGA
Downstream 100 bases:
>100_bases AAATTATGAAGCGAGGCGGCTCAATCCACTCGCTTTTACATCGGGGACACCGGGAAACCTCCTTAGGCCTCCCGAGATCC TTGAATACATAGCCGCACTT
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MPSGLIVFDCDGVLTYNHSSWQQLHEYFGSRDNKYFAELYERNLITYLDWMKIDIALMIHAWGKPIKRRDVENALSTIRI KQEAPEVIRALKDTDYIVAVVSSGIDILVERVCRELGVDLCLYNKLAFHNDELIPGGEALVPLREKPRIVKNLAESLSIS IHEAYYVGDSKWDIEVFRNVGHSIAVKPCGEACGFAEHVVSDLREIIGIVNGSRV
Sequences:
>Translated_215_residues MPSGLIVFDCDGVLTYNHSSWQQLHEYFGSRDNKYFAELYERNLITYLDWMKIDIALMIHAWGKPIKRRDVENALSTIRI KQEAPEVIRALKDTDYIVAVVSSGIDILVERVCRELGVDLCLYNKLAFHNDELIPGGEALVPLREKPRIVKNLAESLSIS IHEAYYVGDSKWDIEVFRNVGHSIAVKPCGEACGFAEHVVSDLREIIGIVNGSRV >Mature_214_residues PSGLIVFDCDGVLTYNHSSWQQLHEYFGSRDNKYFAELYERNLITYLDWMKIDIALMIHAWGKPIKRRDVENALSTIRIK QEAPEVIRALKDTDYIVAVVSSGIDILVERVCRELGVDLCLYNKLAFHNDELIPGGEALVPLREKPRIVKNLAESLSISI HEAYYVGDSKWDIEVFRNVGHSIAVKPCGEACGFAEHVVSDLREIIGIVNGSRV
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 24361; Mature: 24230
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGLIVFDCDGVLTYNHSSWQQLHEYFGSRDNKYFAELYERNLITYLDWMKIDIALMIH CCCCEEEEECCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH AWGKPIKRRDVENALSTIRIKQEAPEVIRALKDTDYIVAVVSSGIDILVERVCRELGVDL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHCCCE CLYNKLAFHNDELIPGGEALVPLREKPRIVKNLAESLSISIHEAYYVGDSKWDIEVFRNV EEHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHEEEEHEEEECCCCCHHHHHHHC GHSIAVKPCGEACGFAEHVVSDLREIIGIVNGSRV CCEEEECCCHHHCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PSGLIVFDCDGVLTYNHSSWQQLHEYFGSRDNKYFAELYERNLITYLDWMKIDIALMIH CCCEEEEECCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH AWGKPIKRRDVENALSTIRIKQEAPEVIRALKDTDYIVAVVSSGIDILVERVCRELGVDL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHCCCE CLYNKLAFHNDELIPGGEALVPLREKPRIVKNLAESLSISIHEAYYVGDSKWDIEVFRNV EEHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHEEEEHEEEECCCCCHHHHHHHC GHSIAVKPCGEACGFAEHVVSDLREIIGIVNGSRV CCEEEECCCHHHCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 11342136; 12051918 [H]