Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884118
Identifier: 218884118
GI number: 218884118
Start: 777649
End: 778248
Strand: Direct
Name: 218884118
Synonym: DKAM_0807
Alternate gene names: NA
Gene position: 777649-778248 (Clockwise)
Preceding gene: 218884116
Following gene: 218884119
Centisome position: 56.96
GC content: 41.0
Gene sequence:
>600_bases TTGAACGTTGACTTCATCCGCCACATAGTGAACCCGGTGTTAAACAAGTATATGGTTAACCAGGAGAAAACCAGGGTTTT AATAGAGGTAAAGAAATTGTTTCAACAGAGCGAGGAAGTATATAGGTTCAGCATATATAATGGAGATCCACGAAACCTCG CCGCATTCCTTAAAAGCGATGATTTTACACGGATCGTGAACATATTAAAGTCAGCTGGGATGACATACTTGATCACAGAG ATACTGAGTGAAGCATTAGCATCATACAGCGGCATCAAGGAGGTTGAAGAAGCTTTAAACCAGGCCCTAGACTCGCTGAA AAGAGAAACACAGGTTGAAACAGGTGGAGGGAGGAAAGAGGATGTAATAAGTATGCTTGAATCCATGCTTAAAAACACTA ATCTGTTTAAACAAATTGAACGGGGTAGAAACAGCCTGACGGCTGAGACCCACAGTGGTTGGCTACTACGTGTTTCAAGC AGTAAGAAGGGATATAAGTTGAAGATTAATTTCACTAAGAATTACCGTGGTAGTGAAACAAGTGAATTAATGGAAGAGGT AGTGAGGATTGCCGAGTGGATTAATAGTCTTCGATTGTGA
Upstream 100 bases:
>100_bases ACTATAATTAATACACCGGGGTTTTAATCGCTTAGAGACAGGTTAGAACAATACATGTTATAATAGGTTAAACATGATTA ATGTAGAACAGGTGTAAGAA
Downstream 100 bases:
>100_bases TGGTGTACTCACATACAACCATAGTAGTTGGCAGCAATTACATGAGTACTTTGGTAGCAGAGACAATAAGTATTTCGCCG AGCTCTACGAGAGAAACCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MNVDFIRHIVNPVLNKYMVNQEKTRVLIEVKKLFQQSEEVYRFSIYNGDPRNLAAFLKSDDFTRIVNILKSAGMTYLITE ILSEALASYSGIKEVEEALNQALDSLKRETQVETGGGRKEDVISMLESMLKNTNLFKQIERGRNSLTAETHSGWLLRVSS SKKGYKLKINFTKNYRGSETSELMEEVVRIAEWINSLRL
Sequences:
>Translated_199_residues MNVDFIRHIVNPVLNKYMVNQEKTRVLIEVKKLFQQSEEVYRFSIYNGDPRNLAAFLKSDDFTRIVNILKSAGMTYLITE ILSEALASYSGIKEVEEALNQALDSLKRETQVETGGGRKEDVISMLESMLKNTNLFKQIERGRNSLTAETHSGWLLRVSS SKKGYKLKINFTKNYRGSETSELMEEVVRIAEWINSLRL >Mature_199_residues MNVDFIRHIVNPVLNKYMVNQEKTRVLIEVKKLFQQSEEVYRFSIYNGDPRNLAAFLKSDDFTRIVNILKSAGMTYLITE ILSEALASYSGIKEVEEALNQALDSLKRETQVETGGGRKEDVISMLESMLKNTNLFKQIERGRNSLTAETHSGWLLRVSS SKKGYKLKINFTKNYRGSETSELMEEVVRIAEWINSLRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22891; Mature: 22891
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVDFIRHIVNPVLNKYMVNQEKTRVLIEVKKLFQQSEEVYRFSIYNGDPRNLAAFLKSD CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCC DFTRIVNILKSAGMTYLITEILSEALASYSGIKEVEEALNQALDSLKRETQVETGGGRKE CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DVISMLESMLKNTNLFKQIERGRNSLTAETHSGWLLRVSSSKKGYKLKINFTKNYRGSET HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCH SELMEEVVRIAEWINSLRL HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVDFIRHIVNPVLNKYMVNQEKTRVLIEVKKLFQQSEEVYRFSIYNGDPRNLAAFLKSD CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHCC DFTRIVNILKSAGMTYLITEILSEALASYSGIKEVEEALNQALDSLKRETQVETGGGRKE CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH DVISMLESMLKNTNLFKQIERGRNSLTAETHSGWLLRVSSSKKGYKLKINFTKNYRGSET HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCH SELMEEVVRIAEWINSLRL HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA