| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884086
Identifier: 218884086
GI number: 218884086
Start: 744132
End: 745283
Strand: Reverse
Name: 218884086
Synonym: DKAM_0775
Alternate gene names: NA
Gene position: 745283-744132 (Counterclockwise)
Preceding gene: 218884087
Following gene: 218884085
Centisome position: 54.59
GC content: 42.45
Gene sequence:
>1152_bases TTGAGTAACCTGGTTATTGAGCTGTTAGATGAACGAACCATAGGCAGGAACTTCCAGGTTGCTGCTCTAGGCCTTATCAG AAGCAGTCTACCATCCAACATCGTCGATGCAATCAAGAATGGCCTCGTCGACGGCAAGATTGTGATAGGTTCAAACGATC TGAAAGTACTCTTGGAAACCCTGGCTCAATATATGAAGGATGTTTGTGAAAGTAAGAGGGTTTTACCGGAATTAGTTAAT GAAGATGAAGCGTTGTCTTACATCGGGATACAGATCTCGTCGAACGATTATAGCAATAAAAATTTATGCAACAATCTAGT GAACGCAGTGGAGACAGTTCTTAACAATCCACAGTCCAAACTGGGGATCCCACGAGCCTTTAGGACTTATGTATTCGGCA AATATAGAACCAGCCTAGAGGAAGTAAGATCAGAAACCTCGAACATTGCCTCACTCTACATCGCTACTGCGGGAGCTATT ATCTCGATGGTTGATCGTCTCAGAGTCAAAGAAACCTATGAAATATACATCGTACCCGACGGCTCCATTACATCTTTCAA TGAGGCAGTGAAGGTGTATGGCTTGATCTATGCTTCGAGGGATGAGACCCTCGATAAATTTATAGAAAACATATACAACA ACCTCGAGAATGTAAGCCTTGAAATCTCGCTGATATTGGCAACCATGGCATTTACCTACTATGTAGCCACTCAAGTAAAG AAGCTTCAGTCTCTTGATCAATACTATGGCTCCTTCGAAACGTATCGATTAATATCTATTAGACCTGAGAAGATATGGGG AAAGTTGAGTAGGATGCAGGTTGCCTGGGAGAGACCCCTCACAATATCAGAGCATTTAAGGATGCTGCAAAATAGAAACG CGATAAATATGCTAGATAATTTTATAAGGCTAGCCAGCTATGTCAGGCGAGTGCGGAATGATGTAAATGCTTACGACGAT ACAATATCCAACTGCCTCCACGAAGTCTACGGTTACATGGAGACGGGATCCCTAGACTTACTAACGTCTTGTGCTGGGAG GATAACAAGGATCGTAGACACGCTGAACTCGAAGAATATCTGTTGGAAGAATAAGTACATTTGCACAGACTTGGAGTCAC TCTTGAGGTATTTAATGAGGTTGTCATATTAG
Upstream 100 bases:
>100_bases CCTTTACCAGAGATTTCTAGCCCACCATGGTATAGGGTACTCACCAATTGTAAAGGATTCGTTGCACCAATAAGTGAAGA AGTGGTGGGGGTAGTCCTAA
Downstream 100 bases:
>100_bases CGTCGACTCCGAGGGTTTGTCGTGACGTTTATAGACGCCATACATTCAAGACCGGGTCTCGAGAGAGCAAGAGAGCTTTT TAAGAGAGACGGCAAGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSNLVIELLDERTIGRNFQVAALGLIRSSLPSNIVDAIKNGLVDGKIVIGSNDLKVLLETLAQYMKDVCESKRVLPELVN EDEALSYIGIQISSNDYSNKNLCNNLVNAVETVLNNPQSKLGIPRAFRTYVFGKYRTSLEEVRSETSNIASLYIATAGAI ISMVDRLRVKETYEIYIVPDGSITSFNEAVKVYGLIYASRDETLDKFIENIYNNLENVSLEISLILATMAFTYYVATQVK KLQSLDQYYGSFETYRLISIRPEKIWGKLSRMQVAWERPLTISEHLRMLQNRNAINMLDNFIRLASYVRRVRNDVNAYDD TISNCLHEVYGYMETGSLDLLTSCAGRITRIVDTLNSKNICWKNKYICTDLESLLRYLMRLSY
Sequences:
>Translated_383_residues MSNLVIELLDERTIGRNFQVAALGLIRSSLPSNIVDAIKNGLVDGKIVIGSNDLKVLLETLAQYMKDVCESKRVLPELVN EDEALSYIGIQISSNDYSNKNLCNNLVNAVETVLNNPQSKLGIPRAFRTYVFGKYRTSLEEVRSETSNIASLYIATAGAI ISMVDRLRVKETYEIYIVPDGSITSFNEAVKVYGLIYASRDETLDKFIENIYNNLENVSLEISLILATMAFTYYVATQVK KLQSLDQYYGSFETYRLISIRPEKIWGKLSRMQVAWERPLTISEHLRMLQNRNAINMLDNFIRLASYVRRVRNDVNAYDD TISNCLHEVYGYMETGSLDLLTSCAGRITRIVDTLNSKNICWKNKYICTDLESLLRYLMRLSY >Mature_382_residues SNLVIELLDERTIGRNFQVAALGLIRSSLPSNIVDAIKNGLVDGKIVIGSNDLKVLLETLAQYMKDVCESKRVLPELVNE DEALSYIGIQISSNDYSNKNLCNNLVNAVETVLNNPQSKLGIPRAFRTYVFGKYRTSLEEVRSETSNIASLYIATAGAII SMVDRLRVKETYEIYIVPDGSITSFNEAVKVYGLIYASRDETLDKFIENIYNNLENVSLEISLILATMAFTYYVATQVKK LQSLDQYYGSFETYRLISIRPEKIWGKLSRMQVAWERPLTISEHLRMLQNRNAINMLDNFIRLASYVRRVRNDVNAYDDT ISNCLHEVYGYMETGSLDLLTSCAGRITRIVDTLNSKNICWKNKYICTDLESLLRYLMRLSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43695; Mature: 43564
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLVIELLDERTIGRNFQVAALGLIRSSLPSNIVDAIKNGLVDGKIVIGSNDLKVLLET CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCHHHHHHHH LAQYMKDVCESKRVLPELVNEDEALSYIGIQISSNDYSNKNLCNNLVNAVETVLNNPQSK HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHH LGIPRAFRTYVFGKYRTSLEEVRSETSNIASLYIATAGAIISMVDRLRVKETYEIYIVPD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC GSITSFNEAVKVYGLIYASRDETLDKFIENIYNNLENVSLEISLILATMAFTYYVATQVK CCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KLQSLDQYYGSFETYRLISIRPEKIWGKLSRMQVAWERPLTISEHLRMLQNRNAINMLDN HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH FIRLASYVRRVRNDVNAYDDTISNCLHEVYGYMETGSLDLLTSCAGRITRIVDTLNSKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC CWKNKYICTDLESLLRYLMRLSY EECCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNLVIELLDERTIGRNFQVAALGLIRSSLPSNIVDAIKNGLVDGKIVIGSNDLKVLLET CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCHHHHHHHH LAQYMKDVCESKRVLPELVNEDEALSYIGIQISSNDYSNKNLCNNLVNAVETVLNNPQSK HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHH LGIPRAFRTYVFGKYRTSLEEVRSETSNIASLYIATAGAIISMVDRLRVKETYEIYIVPD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEC GSITSFNEAVKVYGLIYASRDETLDKFIENIYNNLENVSLEISLILATMAFTYYVATQVK CCCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH KLQSLDQYYGSFETYRLISIRPEKIWGKLSRMQVAWERPLTISEHLRMLQNRNAINMLDN HHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHH FIRLASYVRRVRNDVNAYDDTISNCLHEVYGYMETGSLDLLTSCAGRITRIVDTLNSKNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC CWKNKYICTDLESLLRYLMRLSY EECCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA