Click here to switch to the map view.

The map label for this gene is 218884087

Identifier: 218884087

GI number: 218884087

Start: 745276

End: 746184

Strand: Reverse

Name: 218884087

Synonym: DKAM_0776

Alternate gene names: NA

Gene position: 746184-745276 (Counterclockwise)

Preceding gene: 218884088

Following gene: 218884086

Centisome position: 54.66

GC content: 46.53

Gene sequence:

>909_bases
ATGATTGAGCCCCAAGACATTAGAGTTTTTTACGTCCGTGCATCCTTCTCATGGGGATTTACTGTCAGATACAAGGGGGT
TTCAGCTGCTCAACCCTCTTACCCCATACCACCGCCGACCACCGTTGTTGGAGCCTTCGGATACCCGCTGGCAAGGTTGC
TCGGCTTAGATCCGTATGACAAAGGAGTGGAAAAATATGGAAAAGGCTTCTTAATTTCCCCCACAATGAAGGCTTTCCTA
GAATCTACGATCACAGCCTCAGCAGCCCTAGTAAGAACCAAGGGCTCTTCTGGGGGGATATCCATATACTTAGAACCCGG
CAGGATAATAGGTTTGGTTTATAGGACAGGCGGTCAACTTAGCGATATAAAGAAAGCAAAAATACATACTAGCGAGTTCT
ACGGTAAGGTGCTAGGATTAATGCAGCCTGTCCAAGCAGTTGGCTCAGCCTATGCACCTGGACTCGTCCTAGACTTACTC
TGGATTGTTGATGCTGGAAAGCTAGTCAAAGAACTGGGCGTGTCGAGAGAAAGCTTCGAAAAAGCTGCCTCTAAAGCCGT
CTACGGGGTTGTAAGAATAGGCAGTAAAGAAGGACTAATTTCGCTTCATACAGCTGGCTATTATAATAGCGTTAAGATCC
TGAGTGCGGGAGAGAAGTTTAAGACAAGGTTCTACGTTGATGCTAGATGTGTAGAGCCTCTTGACAGAGAGTATGCTTTC
GAAATAGAATTACCGGGTATACGTTACGATACCGGCAGGTTCTACATTGCCGCCCAGTCGGCATCCCAGAACCTGATCAT
ACCTTTACCAGAGATTTCTAGCCCACCATGGTATAGGGTACTCACCAATTGTAAAGGATTCGTTGCACCAATAAGTGAAG
AAGTGGTGGGGGTAGTCCTAATTGAGTAA

Upstream 100 bases:

>100_bases
ACGTACGAGAAAGCGGCAACACACACGGAGGCTTTAGCCAAAGCGAGAGATAAGGCTGTAAAAATTCTAGAGGCTTTACC
AAAGTAGGTGGTGGAGTATA

Downstream 100 bases:

>100_bases
CCTGGTTATTGAGCTGTTAGATGAACGAACCATAGGCAGGAACTTCCAGGTTGCTGCTCTAGGCCTTATCAGAAGCAGTC
TACCATCCAACATCGTCGAT

Product: CRISPR-associated protein Cas5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MIEPQDIRVFYVRASFSWGFTVRYKGVSAAQPSYPIPPPTTVVGAFGYPLARLLGLDPYDKGVEKYGKGFLISPTMKAFL
ESTITASAALVRTKGSSGGISIYLEPGRIIGLVYRTGGQLSDIKKAKIHTSEFYGKVLGLMQPVQAVGSAYAPGLVLDLL
WIVDAGKLVKELGVSRESFEKAASKAVYGVVRIGSKEGLISLHTAGYYNSVKILSAGEKFKTRFYVDARCVEPLDREYAF
EIELPGIRYDTGRFYIAAQSASQNLIIPLPEISSPPWYRVLTNCKGFVAPISEEVVGVVLIE

Sequences:

>Translated_302_residues
MIEPQDIRVFYVRASFSWGFTVRYKGVSAAQPSYPIPPPTTVVGAFGYPLARLLGLDPYDKGVEKYGKGFLISPTMKAFL
ESTITASAALVRTKGSSGGISIYLEPGRIIGLVYRTGGQLSDIKKAKIHTSEFYGKVLGLMQPVQAVGSAYAPGLVLDLL
WIVDAGKLVKELGVSRESFEKAASKAVYGVVRIGSKEGLISLHTAGYYNSVKILSAGEKFKTRFYVDARCVEPLDREYAF
EIELPGIRYDTGRFYIAAQSASQNLIIPLPEISSPPWYRVLTNCKGFVAPISEEVVGVVLIE
>Mature_302_residues
MIEPQDIRVFYVRASFSWGFTVRYKGVSAAQPSYPIPPPTTVVGAFGYPLARLLGLDPYDKGVEKYGKGFLISPTMKAFL
ESTITASAALVRTKGSSGGISIYLEPGRIIGLVYRTGGQLSDIKKAKIHTSEFYGKVLGLMQPVQAVGSAYAPGLVLDLL
WIVDAGKLVKELGVSRESFEKAASKAVYGVVRIGSKEGLISLHTAGYYNSVKILSAGEKFKTRFYVDARCVEPLDREYAF
EIELPGIRYDTGRFYIAAQSASQNLIIPLPEISSPPWYRVLTNCKGFVAPISEEVVGVVLIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32938; Mature: 32938

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEPQDIRVFYVRASFSWGFTVRYKGVSAAQPSYPIPPPTTVVGAFGYPLARLLGLDPYD
CCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCHH
KGVEKYGKGFLISPTMKAFLESTITASAALVRTKGSSGGISIYLEPGRIIGLVYRTGGQL
HHHHHHCCCEEECHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCEEEEEEEECCCCH
SDIKKAKIHTSEFYGKVLGLMQPVQAVGSAYAPGLVLDLLWIVDAGKLVKELGVSRESFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHCCCHHHHH
KAASKAVYGVVRIGSKEGLISLHTAGYYNSVKILSAGEKFKTRFYVDARCVEPLDREYAF
HHHHHHEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCEEEEEEEEHHHCCCCCCCEEE
EIELPGIRYDTGRFYIAAQSASQNLIIPLPEISSPPWYRVLTNCKGFVAPISEEVVGVVL
EEECCCEEEECCEEEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEE
IE
EC
>Mature Secondary Structure
MIEPQDIRVFYVRASFSWGFTVRYKGVSAAQPSYPIPPPTTVVGAFGYPLARLLGLDPYD
CCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCHH
KGVEKYGKGFLISPTMKAFLESTITASAALVRTKGSSGGISIYLEPGRIIGLVYRTGGQL
HHHHHHCCCEEECHHHHHHHHHHHHHHEEEEEECCCCCCEEEEECCCEEEEEEEECCCCH
SDIKKAKIHTSEFYGKVLGLMQPVQAVGSAYAPGLVLDLLWIVDAGKLVKELGVSRESFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHCCCHHHHH
KAASKAVYGVVRIGSKEGLISLHTAGYYNSVKILSAGEKFKTRFYVDARCVEPLDREYAF
HHHHHHEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCEEEEEEEEHHHCCCCCCCEEE
EIELPGIRYDTGRFYIAAQSASQNLIIPLPEISSPPWYRVLTNCKGFVAPISEEVVGVVL
EEECCCEEEECCEEEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEE
IE
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA