| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884084
Identifier: 218884084
GI number: 218884084
Start: 741415
End: 742287
Strand: Reverse
Name: 218884084
Synonym: DKAM_0773
Alternate gene names: NA
Gene position: 742287-741415 (Counterclockwise)
Preceding gene: 218884085
Following gene: 218884083
Centisome position: 54.37
GC content: 45.48
Gene sequence:
>873_bases ATGGTGAAATGTGATATTTCAGACTGGCCTCTAGCCTATTACGAAGTCAAAACCGGCAACGTAGTGAAGGTGCCGCTACA AAAACACTTGGTCTCGACCTCAAGGATTGCACTAAGTGTTTTCGGCGGGAGAATTAAAGCATTAGATTACCTGATCTCCT CTTCGAGAATGTTGTCTAAATATATGGAAAGTATACGTGGAGTTGTTGAAGCCACCGCCCTGCTTCACGACATCGGGAAA GCAAGTAAATTCTACTGTAGAGGTGTTAAACAGGGTAAAGTCTCATTTGAGCTACATGAGTATATACCGGCTGTTTTACT AGCAGATATCGCGGTAGGCAGCAGCGACGAGCAGGTGAAGGCAGTGTTGAAGCTTGTAGCCGGGGCTATATCCCGGCACC ACACCCCGATAAGGAATAGACACCCCAGCTATCTCCCTGAGGATAAAGGCAAGATAAACAAGCTTGCAGAAGCACTCAAG GTATTCTTAGATGACCGCGACGAGGTAGGTGGCATGCTAAGCGAGCTTGAGAAGCTATGCTCAACGGGTGAGCTCTGTTC CTTCATCGTGGGAAGCCTTAGGGACCATATCAGCAGAATCAACTCGGACAGAATAATAGAAATAATAAAGATAGTTAAGT CGGGCATGTTATTCAATACGCTTAAATCAACAACCAGCTCCGACGGGGACTTCACAGGTTACAAGATCCTAGTAGGCTTA ACAGGCATGCTCATGGTAGCAGATAATATAGCCGCGAATTGCGAAGGAAGGGTTAGCGATGACAAGCATACACCATCCTA TGTTATCTATTGGCTGAGAGAGCTAAATCTAGGTTGTGAAAAATTAGATAATGCCTACCGGGATCTCTTATAG
Upstream 100 bases:
>100_bases CCCCTAAGGTCGAAGATGGGGAAGAGTACTTTGGAAGTATTGCCATTACTCTCCTGATAGCGTCTGAAGGAAGCTATGTT AAAGGGAGGGGTCTATCAGT
Downstream 100 bases:
>100_bases GATAGAGGATTGTAGGCGGTGATTGCTTGAATCCTGAAGTATCGTTGATCGAGGCCACTGTGAGAGTTAGCGGGTTTAGA GGCTACTTGTTCACAGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSKYMESIRGVVEATALLHDIGK ASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVKAVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALK VFLDDRDEVGGMLSELEKLCSTGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL
Sequences:
>Translated_290_residues MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSKYMESIRGVVEATALLHDIGK ASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVKAVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALK VFLDDRDEVGGMLSELEKLCSTGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL >Mature_290_residues MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSKYMESIRGVVEATALLHDIGK ASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVKAVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALK VFLDDRDEVGGMLSELEKLCSTGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32142; Mature: 32142
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSK CEECCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YMESIRGVVEATALLHDIGKASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH AVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALKVFLDDRDEVGGMLSELEKLC HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH STGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHH TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSK CEECCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH YMESIRGVVEATALLHDIGKASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH AVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALKVFLDDRDEVGGMLSELEKLC HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH STGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHH TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA