Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884084

Identifier: 218884084

GI number: 218884084

Start: 741415

End: 742287

Strand: Reverse

Name: 218884084

Synonym: DKAM_0773

Alternate gene names: NA

Gene position: 742287-741415 (Counterclockwise)

Preceding gene: 218884085

Following gene: 218884083

Centisome position: 54.37

GC content: 45.48

Gene sequence:

>873_bases
ATGGTGAAATGTGATATTTCAGACTGGCCTCTAGCCTATTACGAAGTCAAAACCGGCAACGTAGTGAAGGTGCCGCTACA
AAAACACTTGGTCTCGACCTCAAGGATTGCACTAAGTGTTTTCGGCGGGAGAATTAAAGCATTAGATTACCTGATCTCCT
CTTCGAGAATGTTGTCTAAATATATGGAAAGTATACGTGGAGTTGTTGAAGCCACCGCCCTGCTTCACGACATCGGGAAA
GCAAGTAAATTCTACTGTAGAGGTGTTAAACAGGGTAAAGTCTCATTTGAGCTACATGAGTATATACCGGCTGTTTTACT
AGCAGATATCGCGGTAGGCAGCAGCGACGAGCAGGTGAAGGCAGTGTTGAAGCTTGTAGCCGGGGCTATATCCCGGCACC
ACACCCCGATAAGGAATAGACACCCCAGCTATCTCCCTGAGGATAAAGGCAAGATAAACAAGCTTGCAGAAGCACTCAAG
GTATTCTTAGATGACCGCGACGAGGTAGGTGGCATGCTAAGCGAGCTTGAGAAGCTATGCTCAACGGGTGAGCTCTGTTC
CTTCATCGTGGGAAGCCTTAGGGACCATATCAGCAGAATCAACTCGGACAGAATAATAGAAATAATAAAGATAGTTAAGT
CGGGCATGTTATTCAATACGCTTAAATCAACAACCAGCTCCGACGGGGACTTCACAGGTTACAAGATCCTAGTAGGCTTA
ACAGGCATGCTCATGGTAGCAGATAATATAGCCGCGAATTGCGAAGGAAGGGTTAGCGATGACAAGCATACACCATCCTA
TGTTATCTATTGGCTGAGAGAGCTAAATCTAGGTTGTGAAAAATTAGATAATGCCTACCGGGATCTCTTATAG

Upstream 100 bases:

>100_bases
CCCCTAAGGTCGAAGATGGGGAAGAGTACTTTGGAAGTATTGCCATTACTCTCCTGATAGCGTCTGAAGGAAGCTATGTT
AAAGGGAGGGGTCTATCAGT

Downstream 100 bases:

>100_bases
GATAGAGGATTGTAGGCGGTGATTGCTTGAATCCTGAAGTATCGTTGATCGAGGCCACTGTGAGAGTTAGCGGGTTTAGA
GGCTACTTGTTCACAGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSKYMESIRGVVEATALLHDIGK
ASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVKAVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALK
VFLDDRDEVGGMLSELEKLCSTGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL
TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL

Sequences:

>Translated_290_residues
MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSKYMESIRGVVEATALLHDIGK
ASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVKAVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALK
VFLDDRDEVGGMLSELEKLCSTGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL
TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL
>Mature_290_residues
MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSKYMESIRGVVEATALLHDIGK
ASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVKAVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALK
VFLDDRDEVGGMLSELEKLCSTGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL
TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32142; Mature: 32142

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSK
CEECCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YMESIRGVVEATALLHDIGKASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALKVFLDDRDEVGGMLSELEKLC
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
STGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHH
TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MVKCDISDWPLAYYEVKTGNVVKVPLQKHLVSTSRIALSVFGGRIKALDYLISSSRMLSK
CEECCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
YMESIRGVVEATALLHDIGKASKFYCRGVKQGKVSFELHEYIPAVLLADIAVGSSDEQVK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH
AVLKLVAGAISRHHTPIRNRHPSYLPEDKGKINKLAEALKVFLDDRDEVGGMLSELEKLC
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
STGELCSFIVGSLRDHISRINSDRIIEIIKIVKSGMLFNTLKSTTSSDGDFTGYKILVGL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHH
TGMLMVADNIAANCEGRVSDDKHTPSYVIYWLRELNLGCEKLDNAYRDLL
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA