Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884083

Identifier: 218884083

GI number: 218884083

Start: 740447

End: 741388

Strand: Reverse

Name: 218884083

Synonym: DKAM_0772

Alternate gene names: NA

Gene position: 741388-740447 (Counterclockwise)

Preceding gene: 218884084

Following gene: 218884080

Centisome position: 54.31

GC content: 49.58

Gene sequence:

>942_bases
TTGAATCCTGAAGTATCGTTGATCGAGGCCACTGTGAGAGTTAGCGGGTTTAGAGGCTACTTGTTCACAGGGAAGCTTGT
TAAGACTATTATCTTGAGGAGCAATCCTAGTCTATCTAAATTCTTTGAACCCAGTAAAGCCGGGCCCCCCAAGCTTGTCC
ACGTCTCTCCCTTATTCAGGCTTGAAGCCAATGGTATTAAATGCGAGTATAGCTCCGTTGATTGTGGCAGGGGCTTGATG
GCTAAATGTGATGGCGAGCCCTCGATTGTCTCTCTAGATGGGATTTACAGATTCTACCTTGGTTTACACAGAGATGTAGC
GCACTACGCCGATGTTCTTTCAAACCTTATCAACAATATTCAAGGATGTTTTGAGTTCATGGATCAAAAAGTATGCGTCG
AACCCTTAGAGTTCGAGTATGTGGATGCTGTTGCAGCAGGGAATAGGCTAGCGAGGGAAGTCCTCGAGTCTGGGGGAGTC
AAGATCGTGTTCTCGTCGCCTGTTATGCTCAGAGATCCTTTCAAGCTGGCCAGCAAATTCAAATCCTTCGTCCCAACCCC
CATGAACGTGTTCGCGGCACCCCTCTACTCTTTCCTATATGCTTGGGGATTATACAGCATTAAGAGGTTTAGGCTCGAGC
TCCTCAGGCTCCACAGGATCTTCAACGAGACCTACACTCTATTCAAAAGCCTGAGGTTGAAGTGGGTCTACTACAACCTA
AGGCCGGAGCCAGCTCTAACAGGCTTCGTAAATTACAGGCTGAACAGAGACTACCTGAGCCTCCTGAGGGAGAAGGGCAT
TGCCGTCGAAGAGTGGCTGGGCAACATACTTGCATACACTATCGCGCTGGGAGTTGGAGTGGGCAGGGCAACAGGCTTCG
GGCACGTCTCGATAAAGCCCCTGAGGGAGAGTGAGAAGAAGACCCGGGAAACCCGGGCTTAA

Upstream 100 bases:

>100_bases
ATGTTATCTATTGGCTGAGAGAGCTAAATCTAGGTTGTGAAAAATTAGATAATGCCTACCGGGATCTCTTATAGGATAGA
GGATTGTAGGCGGTGATTGC

Downstream 100 bases:

>100_bases
GTCCACAGCTTATAACCGGGCTTTTACATTAAGGTCGCCGGGGCAATCACACCGCCAACAGTAATATAATAATCTCCCAC
AGATAGCAGGCTATAGAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFRLEANGIKCEYSSVDCGRGLM
AKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNIQGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGV
KIVFSSPVMLRDPFKLASKFKSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL
RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKPLRESEKKTRETRA

Sequences:

>Translated_313_residues
MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFRLEANGIKCEYSSVDCGRGLM
AKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNIQGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGV
KIVFSSPVMLRDPFKLASKFKSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL
RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKPLRESEKKTRETRA
>Mature_313_residues
MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFRLEANGIKCEYSSVDCGRGLM
AKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNIQGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGV
KIVFSSPVMLRDPFKLASKFKSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL
RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKPLRESEKKTRETRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35431; Mature: 35431

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFR
CCCCHHHEEEEEEEECCCCEEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEECCEEE
LEANGIKCEYSSVDCGRGLMAKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNI
EECCCEEEEECCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGVKIVFSSPVMLRDPFKLASKF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHH
KSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKP
CCCCHHEEHHHEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
LRESEKKTRETRA
CHHHHHHHHHCCC
>Mature Secondary Structure
MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFR
CCCCHHHEEEEEEEECCCCEEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEECCEEE
LEANGIKCEYSSVDCGRGLMAKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNI
EECCCEEEEECCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGVKIVFSSPVMLRDPFKLASKF
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHH
KSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC
RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKP
CCCCHHEEHHHEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC
LRESEKKTRETRA
CHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA