| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218884083
Identifier: 218884083
GI number: 218884083
Start: 740447
End: 741388
Strand: Reverse
Name: 218884083
Synonym: DKAM_0772
Alternate gene names: NA
Gene position: 741388-740447 (Counterclockwise)
Preceding gene: 218884084
Following gene: 218884080
Centisome position: 54.31
GC content: 49.58
Gene sequence:
>942_bases TTGAATCCTGAAGTATCGTTGATCGAGGCCACTGTGAGAGTTAGCGGGTTTAGAGGCTACTTGTTCACAGGGAAGCTTGT TAAGACTATTATCTTGAGGAGCAATCCTAGTCTATCTAAATTCTTTGAACCCAGTAAAGCCGGGCCCCCCAAGCTTGTCC ACGTCTCTCCCTTATTCAGGCTTGAAGCCAATGGTATTAAATGCGAGTATAGCTCCGTTGATTGTGGCAGGGGCTTGATG GCTAAATGTGATGGCGAGCCCTCGATTGTCTCTCTAGATGGGATTTACAGATTCTACCTTGGTTTACACAGAGATGTAGC GCACTACGCCGATGTTCTTTCAAACCTTATCAACAATATTCAAGGATGTTTTGAGTTCATGGATCAAAAAGTATGCGTCG AACCCTTAGAGTTCGAGTATGTGGATGCTGTTGCAGCAGGGAATAGGCTAGCGAGGGAAGTCCTCGAGTCTGGGGGAGTC AAGATCGTGTTCTCGTCGCCTGTTATGCTCAGAGATCCTTTCAAGCTGGCCAGCAAATTCAAATCCTTCGTCCCAACCCC CATGAACGTGTTCGCGGCACCCCTCTACTCTTTCCTATATGCTTGGGGATTATACAGCATTAAGAGGTTTAGGCTCGAGC TCCTCAGGCTCCACAGGATCTTCAACGAGACCTACACTCTATTCAAAAGCCTGAGGTTGAAGTGGGTCTACTACAACCTA AGGCCGGAGCCAGCTCTAACAGGCTTCGTAAATTACAGGCTGAACAGAGACTACCTGAGCCTCCTGAGGGAGAAGGGCAT TGCCGTCGAAGAGTGGCTGGGCAACATACTTGCATACACTATCGCGCTGGGAGTTGGAGTGGGCAGGGCAACAGGCTTCG GGCACGTCTCGATAAAGCCCCTGAGGGAGAGTGAGAAGAAGACCCGGGAAACCCGGGCTTAA
Upstream 100 bases:
>100_bases ATGTTATCTATTGGCTGAGAGAGCTAAATCTAGGTTGTGAAAAATTAGATAATGCCTACCGGGATCTCTTATAGGATAGA GGATTGTAGGCGGTGATTGC
Downstream 100 bases:
>100_bases GTCCACAGCTTATAACCGGGCTTTTACATTAAGGTCGCCGGGGCAATCACACCGCCAACAGTAATATAATAATCTCCCAC AGATAGCAGGCTATAGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFRLEANGIKCEYSSVDCGRGLM AKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNIQGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGV KIVFSSPVMLRDPFKLASKFKSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKPLRESEKKTRETRA
Sequences:
>Translated_313_residues MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFRLEANGIKCEYSSVDCGRGLM AKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNIQGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGV KIVFSSPVMLRDPFKLASKFKSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKPLRESEKKTRETRA >Mature_313_residues MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFRLEANGIKCEYSSVDCGRGLM AKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNIQGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGV KIVFSSPVMLRDPFKLASKFKSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKPLRESEKKTRETRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35431; Mature: 35431
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFR CCCCHHHEEEEEEEECCCCEEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEECCEEE LEANGIKCEYSSVDCGRGLMAKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNI EECCCEEEEECCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGVKIVFSSPVMLRDPFKLASKF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHH KSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKP CCCCHHEEHHHEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC LRESEKKTRETRA CHHHHHHHHHCCC >Mature Secondary Structure MNPEVSLIEATVRVSGFRGYLFTGKLVKTIILRSNPSLSKFFEPSKAGPPKLVHVSPLFR CCCCHHHEEEEEEEECCCCEEEHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEECCEEE LEANGIKCEYSSVDCGRGLMAKCDGEPSIVSLDGIYRFYLGLHRDVAHYADVLSNLINNI EECCCEEEEECCCCCCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGCFEFMDQKVCVEPLEFEYVDAVAAGNRLAREVLESGGVKIVFSSPVMLRDPFKLASKF HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHH KSFVPTPMNVFAAPLYSFLYAWGLYSIKRFRLELLRLHRIFNETYTLFKSLRLKWVYYNL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC RPEPALTGFVNYRLNRDYLSLLREKGIAVEEWLGNILAYTIALGVGVGRATGFGHVSIKP CCCCHHEEHHHEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECC LRESEKKTRETRA CHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA