| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is iorA [H]
Identifier: 218884037
GI number: 218884037
Start: 697435
End: 699339
Strand: Direct
Name: iorA [H]
Synonym: DKAM_0726
Alternate gene names: 218884037
Gene position: 697435-699339 (Clockwise)
Preceding gene: 218884032
Following gene: 218884038
Centisome position: 51.09
GC content: 52.28
Gene sequence:
>1905_bases GTGGATCCAGGTATTATTTCTATAAGGGGTAATTTTATGAGCAGCTTAAACCCTTTAAAGGCTCTCCCCGGCACCAAGCT AGCATTAATGGGTAATGAAGCCATCGCCAGGGGCGCCGTAGAGGCAGGCGTCTACGTTGTAACCGGTTACCCCGGTACAC CCAGCAGCGAGGTTATAATGACCATACAGAGATATGGGGGCGATCTAGGGATATATATTGAATGGGCTGTGAACGAGAGA GTAGCCTTCGAAATAGCCCTCGGAGCAGCCATCAGCGGCGCCCGCGCGCTCGCGACGATGAAGGCTCCTGGATTAAACGT TGCATCAGACCCTGTTATCTCAGCTGCTTACAGTGGTGTTGACGGCGGGTTAGTGATCCTGGTAGCCGATGATCCGGGTC CCCATACAACCCAGACTGAACAGGATGACAGGTGGTTCGCTAAGTTGGCCAAGCTCCCTACTATCTCTCCATCTAGCCCC CAGGAAGCCAAGGATTACGCGAGGGTAGCATTCGAGATAAGCGAGGAATTAATGCTCCCCGTAATGCTTCTGACGACGAC GCGGGTGAACCATGCCGTTGGGGAAGTTGTCTTAGGCGAGTTCAAGGAGCCGAGGAGGTATAAGGGGTTTAAGAGGGACC CGCCGAGATACGTAAGGGCTGGGATGAAGTGGAATCTTGAAAGACATAAATGGGTTGACCAGCAACTCTCCAGGGTCGAG GAGGTTACGGGAAAGCATGGTTTAAACAGGGTTGAGGGGAGCGGGGACCTCTGTATTGTCACAGGGGGTGCAGCCTACAA TTACGTTGTCGAAGCCGTTGAATCCTTCGGTTTATCTGGCATGACTAGAATACTTAAACTAGGCTTGATACACCCTCTCC CAGCCAGGTTCATACTGGAGAACATAGAGGGCTGTAGGAAAATACTTGTGGTTGAGGAACTGGACCCCTTCATAGAGGAA GAGCTGGCCAAGACGCTCTACAGGGCCGGGCTACATATAGAGATCCTGGGTAAGCATGCTGGCTGGCTCCCCTTTGAAGG CGAGTTAAACCCTGTAATAGTTAGGGAATTCATAGCCAGGGCTACTGGTGTGAGGGAGACTGGGGGCGCTGAGCCGGTGA AACCAGGTGTAGAGATACCTGAGAGACCGCCCCCACTATGCCCTGGATGCCCTCATAGATTCACGTTTATAGCGTTACGC TCAGCACTACTGAGAAACGGGTTCAAGCCCAGCGATATACCTGTATTCGGGGATATTGGTTGCTACGCGCTCTCAGTGAG CCCCCCGCTTAACTCTATATGGACTGAGCACAGTATGGGCGCGAGCATATCGATGGCGATGGGGTTGAAGATAGCTGGCT TCGAGAAACCCGTGGTCGCCGTCATAGGTGATTCAACATTCTTTCACGCCGGCATCCCCTCGTTGATCGAGGCTGTTCAC AAGAGGGTTGACATGCTTGTCTTGATACTGGACAATGACATAGTCGCTATGACTGGTCATCAGTCAACCCCGGCATGGAG CAGGACTGAGACGGGTAGGGAGACAAGGGGGATCAGTATACTGGAGCTGGTGAAGGCTATAGGCGTTGACAATGTCGCCG TAGTTGATCCATACAATCTGAAGGAGGCTGAGAGGATCATAGGCGAGTACCTCGTTAGGAAAGGCGTAAACGTGGTGATA GCTAAACACCCATGTGCCCTTGAGGAGAGGAGGACAAAGCATGTAGAGCCCTATGTGGTTGACGCGGAGAAGTGCACCGG GTGCAGGGCATGTATTGCTTCAACGGGGTGTCCAGCAATAATCATGGTTGAAGGCAAGGCGTATATCATAGAGGAGGATT GCAATGGATGCGGTTTATGCGTTAGATACTGCCAATACGACGCAATAGTAAGGAGGGAGAGGTGA
Upstream 100 bases:
>100_bases AGTAAATGAGGAGCGCATCCTAGGCTGACCCGGGAGTGGCATGGAAATCCCCGATGGATGTAGGAAGGGCTGTCCTCGAA GACGGATCATAGTGTTTTAA
Downstream 100 bases:
>100_bases GTACTGGTGTCCAATAAGGTGTTCAATATATTAATAGCGGGTATCGGCGGGCAGGGAGGCTTAACGCTCTCAAGGATACT TGCTGAGGCAGCTGTTAAAA
Product: iindolepyruvate ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MDPGIISIRGNFMSSLNPLKALPGTKLALMGNEAIARGAVEAGVYVVTGYPGTPSSEVIMTIQRYGGDLGIYIEWAVNER VAFEIALGAAISGARALATMKAPGLNVASDPVISAAYSGVDGGLVILVADDPGPHTTQTEQDDRWFAKLAKLPTISPSSP QEAKDYARVAFEISEELMLPVMLLTTTRVNHAVGEVVLGEFKEPRRYKGFKRDPPRYVRAGMKWNLERHKWVDQQLSRVE EVTGKHGLNRVEGSGDLCIVTGGAAYNYVVEAVESFGLSGMTRILKLGLIHPLPARFILENIEGCRKILVVEELDPFIEE ELAKTLYRAGLHIEILGKHAGWLPFEGELNPVIVREFIARATGVRETGGAEPVKPGVEIPERPPPLCPGCPHRFTFIALR SALLRNGFKPSDIPVFGDIGCYALSVSPPLNSIWTEHSMGASISMAMGLKIAGFEKPVVAVIGDSTFFHAGIPSLIEAVH KRVDMLVLILDNDIVAMTGHQSTPAWSRTETGRETRGISILELVKAIGVDNVAVVDPYNLKEAERIIGEYLVRKGVNVVI AKHPCALEERRTKHVEPYVVDAEKCTGCRACIASTGCPAIIMVEGKAYIIEEDCNGCGLCVRYCQYDAIVRRER
Sequences:
>Translated_634_residues MDPGIISIRGNFMSSLNPLKALPGTKLALMGNEAIARGAVEAGVYVVTGYPGTPSSEVIMTIQRYGGDLGIYIEWAVNER VAFEIALGAAISGARALATMKAPGLNVASDPVISAAYSGVDGGLVILVADDPGPHTTQTEQDDRWFAKLAKLPTISPSSP QEAKDYARVAFEISEELMLPVMLLTTTRVNHAVGEVVLGEFKEPRRYKGFKRDPPRYVRAGMKWNLERHKWVDQQLSRVE EVTGKHGLNRVEGSGDLCIVTGGAAYNYVVEAVESFGLSGMTRILKLGLIHPLPARFILENIEGCRKILVVEELDPFIEE ELAKTLYRAGLHIEILGKHAGWLPFEGELNPVIVREFIARATGVRETGGAEPVKPGVEIPERPPPLCPGCPHRFTFIALR SALLRNGFKPSDIPVFGDIGCYALSVSPPLNSIWTEHSMGASISMAMGLKIAGFEKPVVAVIGDSTFFHAGIPSLIEAVH KRVDMLVLILDNDIVAMTGHQSTPAWSRTETGRETRGISILELVKAIGVDNVAVVDPYNLKEAERIIGEYLVRKGVNVVI AKHPCALEERRTKHVEPYVVDAEKCTGCRACIASTGCPAIIMVEGKAYIIEEDCNGCGLCVRYCQYDAIVRRER >Mature_634_residues MDPGIISIRGNFMSSLNPLKALPGTKLALMGNEAIARGAVEAGVYVVTGYPGTPSSEVIMTIQRYGGDLGIYIEWAVNER VAFEIALGAAISGARALATMKAPGLNVASDPVISAAYSGVDGGLVILVADDPGPHTTQTEQDDRWFAKLAKLPTISPSSP QEAKDYARVAFEISEELMLPVMLLTTTRVNHAVGEVVLGEFKEPRRYKGFKRDPPRYVRAGMKWNLERHKWVDQQLSRVE EVTGKHGLNRVEGSGDLCIVTGGAAYNYVVEAVESFGLSGMTRILKLGLIHPLPARFILENIEGCRKILVVEELDPFIEE ELAKTLYRAGLHIEILGKHAGWLPFEGELNPVIVREFIARATGVRETGGAEPVKPGVEIPERPPPLCPGCPHRFTFIALR SALLRNGFKPSDIPVFGDIGCYALSVSPPLNSIWTEHSMGASISMAMGLKIAGFEKPVVAVIGDSTFFHAGIPSLIEAVH KRVDMLVLILDNDIVAMTGHQSTPAWSRTETGRETRGISILELVKAIGVDNVAVVDPYNLKEAERIIGEYLVRKGVNVVI AKHPCALEERRTKHVEPYVVDAEKCTGCRACIASTGCPAIIMVEGKAYIIEEDCNGCGLCVRYCQYDAIVRRER
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 68986; Mature: 68986
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPGIISIRGNFMSSLNPLKALPGTKLALMGNEAIARGAVEAGVYVVTGYPGTPSSEVIM CCCCEEEEECCHHHCCCHHHCCCCCEEEEECCHHHHHHHHHCCEEEEECCCCCCCCCEEE TIQRYGGDLGIYIEWAVNERVAFEIALGAAISGARALATMKAPGLNVASDPVISAAYSGV EEEHHCCCEEEEEEEECCCEEEEEEEECHHHCCHHHHEEECCCCCCCCCCCHHHHHHCCC DGGLVILVADDPGPHTTQTEQDDRWFAKLAKLPTISPSSPQEAKDYARVAFEISEELMLP CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VMLLTTTRVNHAVGEVVLGEFKEPRRYKGFKRDPPRYVRAGMKWNLERHKWVDQQLSRVE HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHCCCEECCHHHHHHHHHHHHHH EVTGKHGLNRVEGSGDLCIVTGGAAYNYVVEAVESFGLSGMTRILKLGLIHPLPARFILE HHHHHCCCCEECCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHH NIEGCRKILVVEELDPFIEEELAKTLYRAGLHIEILGKHAGWLPFEGELNPVIVREFIAR HHHHHHHEEEHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH ATGVRETGGAEPVKPGVEIPERPPPLCPGCPHRFTFIALRSALLRNGFKPSDIPVFGDIG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCC CYALSVSPPLNSIWTEHSMGASISMAMGLKIAGFEKPVVAVIGDSTFFHAGIPSLIEAVH EEEEECCCCHHHHHHHHCCCCEEEHHHCEEEECCCCCEEEEECCCCEECCCHHHHHHHHH KRVDMLVLILDNDIVAMTGHQSTPAWSRTETGRETRGISILELVKAIGVDNVAVVDPYNL HHHCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCEEEECCCCH KEAERIIGEYLVRKGVNVVIAKHPCALEERRTKHVEPYVVDAEKCTGCRACIASTGCPAI HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCEEEEHHHCCCHHHHHHCCCCCEE IMVEGKAYIIEEDCNGCGLCVRYCQYDAIVRRER EEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDPGIISIRGNFMSSLNPLKALPGTKLALMGNEAIARGAVEAGVYVVTGYPGTPSSEVIM CCCCEEEEECCHHHCCCHHHCCCCCEEEEECCHHHHHHHHHCCEEEEECCCCCCCCCEEE TIQRYGGDLGIYIEWAVNERVAFEIALGAAISGARALATMKAPGLNVASDPVISAAYSGV EEEHHCCCEEEEEEEECCCEEEEEEEECHHHCCHHHHEEECCCCCCCCCCCHHHHHHCCC DGGLVILVADDPGPHTTQTEQDDRWFAKLAKLPTISPSSPQEAKDYARVAFEISEELMLP CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VMLLTTTRVNHAVGEVVLGEFKEPRRYKGFKRDPPRYVRAGMKWNLERHKWVDQQLSRVE HHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHCCCEECCHHHHHHHHHHHHHH EVTGKHGLNRVEGSGDLCIVTGGAAYNYVVEAVESFGLSGMTRILKLGLIHPLPARFILE HHHHHCCCCEECCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHH NIEGCRKILVVEELDPFIEEELAKTLYRAGLHIEILGKHAGWLPFEGELNPVIVREFIAR HHHHHHHEEEHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH ATGVRETGGAEPVKPGVEIPERPPPLCPGCPHRFTFIALRSALLRNGFKPSDIPVFGDIG HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCC CYALSVSPPLNSIWTEHSMGASISMAMGLKIAGFEKPVVAVIGDSTFFHAGIPSLIEAVH EEEEECCCCHHHHHHHHCCCCEEEHHHCEEEECCCCCEEEEECCCCEECCCHHHHHHHHH KRVDMLVLILDNDIVAMTGHQSTPAWSRTETGRETRGISILELVKAIGVDNVAVVDPYNL HHHCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHCCCCEEEECCCCH KEAERIIGEYLVRKGVNVVIAKHPCALEERRTKHVEPYVVDAEKCTGCRACIASTGCPAI HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCEEEEHHHCCCHHHHHHCCCCCEE IMVEGKAYIIEEDCNGCGLCVRYCQYDAIVRRER EEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]