| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is iorB [H]
Identifier: 218884038
GI number: 218884038
Start: 699346
End: 699939
Strand: Direct
Name: iorB [H]
Synonym: DKAM_0727
Alternate gene names: 218884038
Gene position: 699346-699939 (Clockwise)
Preceding gene: 218884037
Following gene: 218884039
Centisome position: 51.23
GC content: 48.82
Gene sequence:
>594_bases GTGTCCAATAAGGTGTTCAATATATTAATAGCGGGTATCGGCGGGCAGGGAGGCTTAACGCTCTCAAGGATACTTGCTGA GGCAGCTGTTAAAACCGGCTTCTCCGTTAAGACAGGTGAAACCCTTGGAATGGCTCAGAGATACGGTAGCGTTGTGAGCT TCGTGAGGATAGGTGGTAACACGTACTCACCGATATTTGGTAGTGGCGAGGCAGATGTATTACTCGGCTTAGAGTTAACG GAGACTGTTAGGAACATGAGGTATTTGAGGCATCATGGATTAATAATCGTAGCCGATGAATACAGGCCGCCATCGATGGC CAGTATAACTGGTAGAGCACCCTCGAGAAGCATCCTGCTAGCCGAGCTAGCCAGGTATAATGCTGTCGTGGTGCCAGCAA GGAAGATAGCCGTGGAGGCTGGCAACCCAAGAGCATTAAACATGGTACTGTTAGGGGTGCTCAATGCAGCCACGAATATA CTGCCCCACCATGTAGTCGAGGATACGATAAGAAGCATAATTCGTGGAGAGGCAGGGGAGAAATCTGTAAGAGCCTATTA CGAGGGCCACAAATGGTTTAAGAACCATCGTTAA
Upstream 100 bases:
>100_bases AGGCAAGGCGTATATCATAGAGGAGGATTGCAATGGATGCGGTTTATGCGTTAGATACTGCCAATACGACGCAATAGTAA GGAGGGAGAGGTGAGTACTG
Downstream 100 bases:
>100_bases GCTGATGTAGCGGTTAAACAGTCTTCTATCCTCTGTGTCTTCAGGGAATTTTTAGAAATTTTATATTGTTTAATAAAATT AACCTAATATGTGGGAAATG
Product: iindolepyruvate ferredoxin oxidoreductase subunit beta
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSNKVFNILIAGIGGQGGLTLSRILAEAAVKTGFSVKTGETLGMAQRYGSVVSFVRIGGNTYSPIFGSGEADVLLGLELT ETVRNMRYLRHHGLIIVADEYRPPSMASITGRAPSRSILLAELARYNAVVVPARKIAVEAGNPRALNMVLLGVLNAATNI LPHHVVEDTIRSIIRGEAGEKSVRAYYEGHKWFKNHR
Sequences:
>Translated_197_residues MSNKVFNILIAGIGGQGGLTLSRILAEAAVKTGFSVKTGETLGMAQRYGSVVSFVRIGGNTYSPIFGSGEADVLLGLELT ETVRNMRYLRHHGLIIVADEYRPPSMASITGRAPSRSILLAELARYNAVVVPARKIAVEAGNPRALNMVLLGVLNAATNI LPHHVVEDTIRSIIRGEAGEKSVRAYYEGHKWFKNHR >Mature_196_residues SNKVFNILIAGIGGQGGLTLSRILAEAAVKTGFSVKTGETLGMAQRYGSVVSFVRIGGNTYSPIFGSGEADVLLGLELTE TVRNMRYLRHHGLIIVADEYRPPSMASITGRAPSRSILLAELARYNAVVVPARKIAVEAGNPRALNMVLLGVLNAATNIL PHHVVEDTIRSIIRGEAGEKSVRAYYEGHKWFKNHR
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017719 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 21324; Mature: 21193
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKVFNILIAGIGGQGGLTLSRILAEAAVKTGFSVKTGETLGMAQRYGSVVSFVRIGGN CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC TYSPIFGSGEADVLLGLELTETVRNMRYLRHHGLIIVADEYRPPSMASITGRAPSRSILL CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEECCCCCCHHHHH AELARYNAVVVPARKIAVEAGNPRALNMVLLGVLNAATNILPHHVVEDTIRSIIRGEAGE HHHHHCCEEEEEHHEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC KSVRAYYEGHKWFKNHR HHHHHHHHHHHHHCCCC >Mature Secondary Structure SNKVFNILIAGIGGQGGLTLSRILAEAAVKTGFSVKTGETLGMAQRYGSVVSFVRIGGN CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC TYSPIFGSGEADVLLGLELTETVRNMRYLRHHGLIIVADEYRPPSMASITGRAPSRSILL CCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEECCCCCCHHHHH AELARYNAVVVPARKIAVEAGNPRALNMVLLGVLNAATNILPHHVVEDTIRSIIRGEAGE HHHHHCCEEEEEHHEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC KSVRAYYEGHKWFKNHR HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]