Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883999
Identifier: 218883999
GI number: 218883999
Start: 658801
End: 659406
Strand: Reverse
Name: 218883999
Synonym: DKAM_0688
Alternate gene names: NA
Gene position: 659406-658801 (Counterclockwise)
Preceding gene: 218884002
Following gene: 218883998
Centisome position: 48.3
GC content: 41.75
Gene sequence:
>606_bases ATGGTGGATGCTTTGAATGGTTTACTTGAATTAATAGGCATCCTTACAAGTGATTTTATCGCAAGGGAGTATGAGGAGGA GCCAGTTAAAATACTTGTTACAGCACAGGATCTCAATGTTTTCATAGATGATGGATTTATAGAGCTTACAAAGGGCTCTG AACAAGTTGTACCAAGGTGGATTGCAAGAAAGCTCGCCGCGAAGAATCAGGCTAAAATAGTCGACGATGATATCAGCAGG GATATGTTATCGCAATTAGTCTTCAACGAGGATAGGTATAGGAATCAATTAAGGTTTGAGAAACTCAGGGGCTATTTCTA CCACAGGATGAAGGATACACTTGTAAAGAATGTTGAGGAGTATGGGAGGTCACCAGATATAAAGCGACTGCAAGAAGTAA GCGAGCTCGTGAGGATTATAAACGACTCAATGCTCTCTCTCACACGGTTTAGAACCAGGAAGATAGTCAACCTTACCATG ACACCTGGCTATCCAGCCGACATCGTGGAGAACCTGAGTGAGGAGGAGAAGATACTCTTCAACGCATTGAAGACTATTCT AGATATATACTATAGGAGGTTCATAGGGGTTGAAACAATTGGATAG
Upstream 100 bases:
>100_bases CAATAATTCTACTTCCTCACTCAAACTAGACACCTAAAGGCTTCATTATTAGGTATAATGCGGCTAGGATATTAAAGGGA TTTCAGGGTATTATAACTAA
Downstream 100 bases:
>100_bases CGAGGCTGATGTACAGGTAAGCCTGAAGGGAGCCGAGCTCACCGAGGCATTCAAGAAGTTCCTGGAAACATACCGCTCTA AGGAGGGCCTACGTAAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MVDALNGLLELIGILTSDFIAREYEEEPVKILVTAQDLNVFIDDGFIELTKGSEQVVPRWIARKLAAKNQAKIVDDDISR DMLSQLVFNEDRYRNQLRFEKLRGYFYHRMKDTLVKNVEEYGRSPDIKRLQEVSELVRIINDSMLSLTRFRTRKIVNLTM TPGYPADIVENLSEEEKILFNALKTILDIYYRRFIGVETIG
Sequences:
>Translated_201_residues MVDALNGLLELIGILTSDFIAREYEEEPVKILVTAQDLNVFIDDGFIELTKGSEQVVPRWIARKLAAKNQAKIVDDDISR DMLSQLVFNEDRYRNQLRFEKLRGYFYHRMKDTLVKNVEEYGRSPDIKRLQEVSELVRIINDSMLSLTRFRTRKIVNLTM TPGYPADIVENLSEEEKILFNALKTILDIYYRRFIGVETIG >Mature_201_residues MVDALNGLLELIGILTSDFIAREYEEEPVKILVTAQDLNVFIDDGFIELTKGSEQVVPRWIARKLAAKNQAKIVDDDISR DMLSQLVFNEDRYRNQLRFEKLRGYFYHRMKDTLVKNVEEYGRSPDIKRLQEVSELVRIINDSMLSLTRFRTRKIVNLTM TPGYPADIVENLSEEEKILFNALKTILDIYYRRFIGVETIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23454; Mature: 23454
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDALNGLLELIGILTSDFIAREYEEEPVKILVTAQDLNVFIDDGFIELTKGSEQVVPRW CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEECCCCHHHHHHH IARKLAAKNQAKIVDDDISRDMLSQLVFNEDRYRNQLRFEKLRGYFYHRMKDTLVKNVEE HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGRSPDIKRLQEVSELVRIINDSMLSLTRFRTRKIVNLTMTPGYPADIVENLSEEEKILF HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCHHHHHHH NALKTILDIYYRRFIGVETIG HHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVDALNGLLELIGILTSDFIAREYEEEPVKILVTAQDLNVFIDDGFIELTKGSEQVVPRW CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCEEEECCCCHHHHHHH IARKLAAKNQAKIVDDDISRDMLSQLVFNEDRYRNQLRFEKLRGYFYHRMKDTLVKNVEE HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGRSPDIKRLQEVSELVRIINDSMLSLTRFRTRKIVNLTMTPGYPADIVENLSEEEKILF HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHCCCHHHHHHH NALKTILDIYYRRFIGVETIG HHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA