Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883966

Identifier: 218883966

GI number: 218883966

Start: 630029

End: 630766

Strand: Reverse

Name: 218883966

Synonym: DKAM_0655

Alternate gene names: NA

Gene position: 630766-630029 (Counterclockwise)

Preceding gene: 218883968

Following gene: 218883965

Centisome position: 46.2

GC content: 44.85

Gene sequence:

>738_bases
ATGGGAGGCTTATTCGATCCAGATACAGAGTCAGAGTTAAGGAAGATATTCCAGGCTTTTCCCAGAGAACTAAATGATAT
ATTAGTGGTTTCAAGCAGTGGTGGAGGGCATGAACACCATGAAGACGAGGAAGAACATCATCACCACCATGGAGATTGTC
CCACATGCGATGAGGCAAAAGTACTTGCAGAGGAAATCATGAGGATTAGCGGGGGGAAGATCAGATTCACGATATTAAAC
CCTGAGAATTTTTCGGGGCTGAGGCCAAGATATATCCCGGCATTCATTTATGATACCCCTAAGAGGAATATACGCTACTA
TGGCCTACCAAGCGGACAGGAGTTCGCGCCATTCATATTCATACACGACTATATATCTAACGGCGTTAAGCTATCAAAGA
GCGTTATAGAAGAAATAGAGAGTATTGATACTCCTCTCCATGTAAAGATATTCGTGACGCCAGAATGCCCGTACTGCCCA
CTAGTTGTAGACTTCTTCAATCAAGCCGGCATAGTTAACCAGAATATAGTTGTTGAGACAATAGAGGCGTTAGAACACCC
TATTGAGGCAGACTCTTACGGGGTGCAGTATGTGCCATTCGTGACGATCACTAAATTAAGCGATTACGAGAAATACGGTG
CGAAGCCGGTTGAGGTGATCCCCGGATACCTGCCACCAGAGGAAAACGCGAAGATCCTGGTTAAAGCCGGGAATAAACTA
AGGAGGATTAATTCCTGA

Upstream 100 bases:

>100_bases
ATTTTATAACTAGCCTATAGAGATCCTTATTAAGTTAATCCATATATTTTAAAAGGTGTTAAATAAAATAAATGTTAGAT
GGGCCTAACAGGTGATTACG

Downstream 100 bases:

>100_bases
GGATTAAAACCATGATCGGTGAGCGCTCAGAAGAATACCTGGAAGTAATATATGTGTTATCTATGAATGGAAGGCCAAAG
GTCAGGGAGATAGCTAGGAG

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: Glutaredoxin-Like Domain-Containing Protein; Glutaredoxin-Like Protein; Glutaredoxin-Related Protein; Protein Disulfide Oxidoreductase; NADH Dehydrogenase; Alkyl Hydroperoxide Reductase Subunit F Related Protein; Dehydrogenase Selenocysteine-Containing; Dehydrogenase Selenocysteine-Containing Protein; Glutaredoxin Related Protein; Alkyl Hydroperoxide Reductase Large Subunit

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MGGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAKVLAEEIMRISGGKIRFTILN
PENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIFIHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCP
LVVDFFNQAGIVNQNIVVETIEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKL
RRINS

Sequences:

>Translated_245_residues
MGGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAKVLAEEIMRISGGKIRFTILN
PENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIFIHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCP
LVVDFFNQAGIVNQNIVVETIEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKL
RRINS
>Mature_244_residues
GGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAKVLAEEIMRISGGKIRFTILNP
ENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIFIHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCPL
VVDFFNQAGIVNQNIVVETIEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKLR
RINS

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27680; Mature: 27548

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAK
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHH
VLAEEIMRISGGKIRFTILNPENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEE
IHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCPLVVDFFNQAGIVNQNIVVET
EEHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHH
IEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKL
HHHHHCCCCCCCCCEEEECEEEEEECCCHHHHCCCCCEECCCCCCCCCCCEEEEECCCCH
RRINS
HCCCC
>Mature Secondary Structure 
GGLFDPDTESELRKIFQAFPRELNDILVVSSSGGGHEHHEDEEEHHHHHGDCPTCDEAK
CCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHH
VLAEEIMRISGGKIRFTILNPENFSGLRPRYIPAFIYDTPKRNIRYYGLPSGQEFAPFIF
HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCEEE
IHDYISNGVKLSKSVIEEIESIDTPLHVKIFVTPECPYCPLVVDFFNQAGIVNQNIVVET
EEHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHH
IEALEHPIEADSYGVQYVPFVTITKLSDYEKYGAKPVEVIPGYLPPEENAKILVKAGNKL
HHHHHCCCCCCCCCEEEECEEEEEECCCHHHHCCCCCEECCCCCCCCCCCEEEEECCCCH
RRINS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA