Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883923

Identifier: 218883923

GI number: 218883923

Start: 578400

End: 579710

Strand: Reverse

Name: 218883923

Synonym: DKAM_0612

Alternate gene names: NA

Gene position: 579710-578400 (Counterclockwise)

Preceding gene: 218883924

Following gene: 218883922

Centisome position: 42.46

GC content: 41.27

Gene sequence:

>1311_bases
TTGAATGTCTTCTCAGAGATCCTGGAGAAATATGCTAAGCTGATGCACAGCGATTACCTAAGATCACGTGAGAACATAAT
TGTCAGAGAGAGAAACAGGTTATATGAGAAATTCTATAAGGCGGCATATATACCATTAGTATCCCAGGAAAAACCCGTGG
TATTCGTTGACTCGGGGAGATTGGATTTAGAGACCGACGTCTCCTCGCTTACGATAGTTAACGTTGGTGCATTAATACGT
AATAAAGAAGGAGAGCTAATTCTTCCAGGTGAGTACCTAGGTAATCCCGAGGCTCCATTAGCGGAGACGATCATTGTTTA
CTCGAGCATTGGTGCCGAGAAAAGGGAAGACATGGATTTATCATTCAAGATCATCATGGAACCCGTAGGGTATTCTCTGT
TTTTAGATGGAAGAGATTCCTATAAAATATCTAGTGAACTCTCGGAGAAAATAAACAGGGATCTAGCAAGCTCAAGGATG
AATATCGCTAGGAAAACCCGTATACTGAAACGTATCCACAGTTATATCACACAACTAATCGAGATAGGATACCTCGCAAG
GATAATCAGTAGGAAACCTGGTTGTATAGGCGTCGTAGACGGTACATTGATCAGGTGGTTGAGTGTTAAAGGTGCACGGA
TAAGTGGATATAGAATATTCTCAACACTCTCCGGGTTAGATGAAGCTATTCTTGAAACACACTTAGATTCCATTATTGGG
ATTTCTAAGACGTCGAAGTTTACAACTCTTGCAAGAGCCTTTAACTTATTCAACAAGTATGAGAAACGAGAGAATGGTGT
ATACGGCTACGTTGATTCCGAGTCAGCTAGGGCAGCGGCTAATGTATTAATGGATATTATCGCCAAGCTCGATGTCGATG
TAGCTGAAGAGGCCAGTAGAATTTTTAATAGGATAGTATTCCAGGATGGAGGCATATGGAGCTTTAGAATACCGGTATCA
GGCGATTTCAAGCAGATATTTCACGCAGAATACTATACTAGGGAGCCCGTGTTAAATATAATTCATGAAGGTAGCAAGCC
CACTGTAAAAGTCAATGAAAAACTAGCAGAGCACTTAGCTGAGAAAATACACTATACTCTTCCACAAGTATTCGCCATGA
GGAGTAATATCCTGGGATTACCGCCCTATGGATTCATGGAGGTTGATAGGGAGGTCAGAATAGATAAGCATAAAGCCAAG
ATCATATATCAATCATTCCTGGTAAAGCTTCATGACATCACCGGTAGGGAAGACCATCCCTTAATACAGGTTTTCGAGTC
TACCTTGAAAATGAGGTATGGTTACAGGTGA

Upstream 100 bases:

>100_bases
CTACGAAGAAAAAGGTGAAAGGGGTAGATACTATTATAAGGAACTCTATGAGAAAATCAAGAGTATTCTCCAGGAATCCT
ATAAGGGGGGCTGAGAACAC

Downstream 100 bases:

>100_bases
TCTACATGCCCGTTCAGATAGGATTTATATATGAATTGGAGGGCAATACTATCAGGGTGGCCCTTACATCTCAAGATTAT
AATCCAGGACTAGGCGACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MNVFSEILEKYAKLMHSDYLRSRENIIVRERNRLYEKFYKAAYIPLVSQEKPVVFVDSGRLDLETDVSSLTIVNVGALIR
NKEGELILPGEYLGNPEAPLAETIIVYSSIGAEKREDMDLSFKIIMEPVGYSLFLDGRDSYKISSELSEKINRDLASSRM
NIARKTRILKRIHSYITQLIEIGYLARIISRKPGCIGVVDGTLIRWLSVKGARISGYRIFSTLSGLDEAILETHLDSIIG
ISKTSKFTTLARAFNLFNKYEKRENGVYGYVDSESARAAANVLMDIIAKLDVDVAEEASRIFNRIVFQDGGIWSFRIPVS
GDFKQIFHAEYYTREPVLNIIHEGSKPTVKVNEKLAEHLAEKIHYTLPQVFAMRSNILGLPPYGFMEVDREVRIDKHKAK
IIYQSFLVKLHDITGREDHPLIQVFESTLKMRYGYR

Sequences:

>Translated_436_residues
MNVFSEILEKYAKLMHSDYLRSRENIIVRERNRLYEKFYKAAYIPLVSQEKPVVFVDSGRLDLETDVSSLTIVNVGALIR
NKEGELILPGEYLGNPEAPLAETIIVYSSIGAEKREDMDLSFKIIMEPVGYSLFLDGRDSYKISSELSEKINRDLASSRM
NIARKTRILKRIHSYITQLIEIGYLARIISRKPGCIGVVDGTLIRWLSVKGARISGYRIFSTLSGLDEAILETHLDSIIG
ISKTSKFTTLARAFNLFNKYEKRENGVYGYVDSESARAAANVLMDIIAKLDVDVAEEASRIFNRIVFQDGGIWSFRIPVS
GDFKQIFHAEYYTREPVLNIIHEGSKPTVKVNEKLAEHLAEKIHYTLPQVFAMRSNILGLPPYGFMEVDREVRIDKHKAK
IIYQSFLVKLHDITGREDHPLIQVFESTLKMRYGYR
>Mature_436_residues
MNVFSEILEKYAKLMHSDYLRSRENIIVRERNRLYEKFYKAAYIPLVSQEKPVVFVDSGRLDLETDVSSLTIVNVGALIR
NKEGELILPGEYLGNPEAPLAETIIVYSSIGAEKREDMDLSFKIIMEPVGYSLFLDGRDSYKISSELSEKINRDLASSRM
NIARKTRILKRIHSYITQLIEIGYLARIISRKPGCIGVVDGTLIRWLSVKGARISGYRIFSTLSGLDEAILETHLDSIIG
ISKTSKFTTLARAFNLFNKYEKRENGVYGYVDSESARAAANVLMDIIAKLDVDVAEEASRIFNRIVFQDGGIWSFRIPVS
GDFKQIFHAEYYTREPVLNIIHEGSKPTVKVNEKLAEHLAEKIHYTLPQVFAMRSNILGLPPYGFMEVDREVRIDKHKAK
IIYQSFLVKLHDITGREDHPLIQVFESTLKMRYGYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49850; Mature: 49850

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVFSEILEKYAKLMHSDYLRSRENIIVRERNRLYEKFYKAAYIPLVSQEKPVVFVDSGR
CCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCEEECCCCCEEEEECCC
LDLETDVSSLTIVNVGALIRNKEGELILPGEYLGNPEAPLAETIIVYSSIGAEKREDMDL
EEEECCCCCEEEEEHHHHHCCCCCCEEECHHHCCCCCCCHHHHHHEEECCCCCCCCCCCC
SFKIIMEPVGYSLFLDGRDSYKISSELSEKINRDLASSRMNIARKTRILKRIHSYITQLI
EEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGYLARIISRKPGCIGVVDGTLIRWLSVKGARISGYRIFSTLSGLDEAILETHLDSIIG
HHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHC
ISKTSKFTTLARAFNLFNKYEKRENGVYGYVDSESARAAANVLMDIIAKLDVDVAEEASR
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH
IFNRIVFQDGGIWSFRIPVSGDFKQIFHAEYYTREPVLNIIHEGSKPTVKVNEKLAEHLA
HHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
EKIHYTLPQVFAMRSNILGLPPYGFMEVDREVRIDKHKAKIIYQSFLVKLHDITGREDHP
HHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LIQVFESTLKMRYGYR
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVFSEILEKYAKLMHSDYLRSRENIIVRERNRLYEKFYKAAYIPLVSQEKPVVFVDSGR
CCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHCEEECCCCCEEEEECCC
LDLETDVSSLTIVNVGALIRNKEGELILPGEYLGNPEAPLAETIIVYSSIGAEKREDMDL
EEEECCCCCEEEEEHHHHHCCCCCCEEECHHHCCCCCCCHHHHHHEEECCCCCCCCCCCC
SFKIIMEPVGYSLFLDGRDSYKISSELSEKINRDLASSRMNIARKTRILKRIHSYITQLI
EEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGYLARIISRKPGCIGVVDGTLIRWLSVKGARISGYRIFSTLSGLDEAILETHLDSIIG
HHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHC
ISKTSKFTTLARAFNLFNKYEKRENGVYGYVDSESARAAANVLMDIIAKLDVDVAEEASR
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHH
IFNRIVFQDGGIWSFRIPVSGDFKQIFHAEYYTREPVLNIIHEGSKPTVKVNEKLAEHLA
HHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHH
EKIHYTLPQVFAMRSNILGLPPYGFMEVDREVRIDKHKAKIIYQSFLVKLHDITGREDHP
HHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LIQVFESTLKMRYGYR
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA