| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883910
Identifier: 218883910
GI number: 218883910
Start: 561324
End: 562643
Strand: Direct
Name: 218883910
Synonym: DKAM_0599
Alternate gene names: NA
Gene position: 561324-562643 (Clockwise)
Preceding gene: 218883909
Following gene: 218883911
Centisome position: 41.12
GC content: 44.85
Gene sequence:
>1320_bases ATGGCTATTCATGCTACAACAAGGCTGAGGCTCTACATGTTATCTACTGCCCTGCTTCTAGCTGGAGCCATAATAGTTGA CCCAACTTTCCTGCCTCCAGCCCTACTACTCCTTTCTCTCCCAGTGTTCTCATACATAGCTATAGAGTCAAACTATAAAA TCCTTAAGAGCATAAAGGTCTCAGGCTCAGTCGCCATGGAAACCGGTGGAAGATTCTTCGTCGAGTACACTATTATAAAC CCTACTAGAATACCTATTCTGCCAGTTGAGTTCAGCATACAGTATAGCGAGCTGATAAAGCTAGTCAAGGGATCAAAGAG GGGCTTATTAATAATACCACCTAGAGCAAAGGTTAAGCTAAGGTTCTCCTTTCACGGCAGATTAGGTGAACACTTTGTTG GCCCGCTTAAAATAGTTCTAAGGGATCTCTTCGGATTCTATAGATCGAGTGACGAATATCTTGGAAAAGCACTGGTGGTC AATATACCTCCCACCGTTGAGGAGGTCATTGTCAGGAAACTACTCATATATGCGAGAAGTACTGGGCTCGTTAAATCAAG GATCCCTGGGGAGGGAGTCGAATTCTATGATATACGGGATTATTCGCCGGGCGATGAAGCGAAGAGGATAGTCTGGCGTA TCTATGCTTCAAGAAGAATGCTTGCCATCTGGGAGCCTGAGAAGGAGGTGTTTCAACCAGTGTTATTCATACTTGATGGG ACAAGAGAGATGTGGAGCGGCCCAATGAGTCAATCCATGATAGAGCATTCAGCGAGGATCATATCTTCCATAATATACTA CCTAGTTAAAAGAGGCTACCCTGTCTCAGCAACCGTCTTCAATGAGTCACTAGTGCACACCAGTGGGAAACCCATGCATG GATATCACGGATACATGGAGGCTCTAAGAGTACTCTCCAAGGTAAAGTTTGAGGAGGGGGATGAATCACATAGGCGTAGG GCGTTATCAGGAGTACTCTCATACACGTATACCAGGATTCTCCCAAGAGATAGAAGTATAATATTTCTCTTTACACATCT CAGGGATACCATTATAGATGAAATAGCTGCGTGGAATAACCTATACAAGGATAAAGGCCACATCCTCTACATTGTCCACC CCCTTATAACAGCCTATGAGTCAGATAGCGATGTCCCTGAGTGGGTTGCGAATATATATAGGGTGAAACTAATAGAGAAC CTTCGAGAAGACATGGCAGTCATCTCCAGGGCGCGTGGGAGAGGGTTGAAGGTAATAGCTGTTACCCCTGATCTAATACC CCAGAGGGTCATGGATATTATTGAGAGGTATAGCTCGTAG
Upstream 100 bases:
>100_bases TGAAGCACTTAAAGCCTATAGTGAAACCGAAAAAATGCTTTCACTCATTACATCAAGGCTTCAGATAGGGGATTATAGAA GGCTTCTAGCGGGGATCTAA
Downstream 100 bases:
>100_bases AGTTAAATAATTTAACAATAAAGTATAAATATGATTCAACCAGTAATTATCCCATGGTAGATAACTATGATGTCCAAGCA TCCTCTTGACCTACCATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MAIHATTRLRLYMLSTALLLAGAIIVDPTFLPPALLLLSLPVFSYIAIESNYKILKSIKVSGSVAMETGGRFFVEYTIIN PTRIPILPVEFSIQYSELIKLVKGSKRGLLIIPPRAKVKLRFSFHGRLGEHFVGPLKIVLRDLFGFYRSSDEYLGKALVV NIPPTVEEVIVRKLLIYARSTGLVKSRIPGEGVEFYDIRDYSPGDEAKRIVWRIYASRRMLAIWEPEKEVFQPVLFILDG TREMWSGPMSQSMIEHSARIISSIIYYLVKRGYPVSATVFNESLVHTSGKPMHGYHGYMEALRVLSKVKFEEGDESHRRR ALSGVLSYTYTRILPRDRSIIFLFTHLRDTIIDEIAAWNNLYKDKGHILYIVHPLITAYESDSDVPEWVANIYRVKLIEN LREDMAVISRARGRGLKVIAVTPDLIPQRVMDIIERYSS
Sequences:
>Translated_439_residues MAIHATTRLRLYMLSTALLLAGAIIVDPTFLPPALLLLSLPVFSYIAIESNYKILKSIKVSGSVAMETGGRFFVEYTIIN PTRIPILPVEFSIQYSELIKLVKGSKRGLLIIPPRAKVKLRFSFHGRLGEHFVGPLKIVLRDLFGFYRSSDEYLGKALVV NIPPTVEEVIVRKLLIYARSTGLVKSRIPGEGVEFYDIRDYSPGDEAKRIVWRIYASRRMLAIWEPEKEVFQPVLFILDG TREMWSGPMSQSMIEHSARIISSIIYYLVKRGYPVSATVFNESLVHTSGKPMHGYHGYMEALRVLSKVKFEEGDESHRRR ALSGVLSYTYTRILPRDRSIIFLFTHLRDTIIDEIAAWNNLYKDKGHILYIVHPLITAYESDSDVPEWVANIYRVKLIEN LREDMAVISRARGRGLKVIAVTPDLIPQRVMDIIERYSS >Mature_438_residues AIHATTRLRLYMLSTALLLAGAIIVDPTFLPPALLLLSLPVFSYIAIESNYKILKSIKVSGSVAMETGGRFFVEYTIINP TRIPILPVEFSIQYSELIKLVKGSKRGLLIIPPRAKVKLRFSFHGRLGEHFVGPLKIVLRDLFGFYRSSDEYLGKALVVN IPPTVEEVIVRKLLIYARSTGLVKSRIPGEGVEFYDIRDYSPGDEAKRIVWRIYASRRMLAIWEPEKEVFQPVLFILDGT REMWSGPMSQSMIEHSARIISSIIYYLVKRGYPVSATVFNESLVHTSGKPMHGYHGYMEALRVLSKVKFEEGDESHRRRA LSGVLSYTYTRILPRDRSIIFLFTHLRDTIIDEIAAWNNLYKDKGHILYIVHPLITAYESDSDVPEWVANIYRVKLIENL REDMAVISRARGRGLKVIAVTPDLIPQRVMDIIERYSS
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50136; Mature: 50004
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHATTRLRLYMLSTALLLAGAIIVDPTFLPPALLLLSLPVFSYIAIESNYKILKSIKV CEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCCEEHEEEC SGSVAMETGGRFFVEYTIINPTRIPILPVEFSIQYSELIKLVKGSKRGLLIIPPRAKVKL CCCEEEECCCEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEECCCCEEEE RFSFHGRLGEHFVGPLKIVLRDLFGFYRSSDEYLGKALVVNIPPTVEEVIVRKLLIYARS EEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHC TGLVKSRIPGEGVEFYDIRDYSPGDEAKRIVWRIYASRRMLAIWEPEKEVFQPVLFILDG CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC TREMWSGPMSQSMIEHSARIISSIIYYLVKRGYPVSATVFNESLVHTSGKPMHGYHGYME CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCHHHHHH ALRVLSKVKFEEGDESHRRRALSGVLSYTYTRILPRDRSIIFLFTHLRDTIIDEIAAWNN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH LYKDKGHILYIVHPLITAYESDSDVPEWVANIYRVKLIENLREDMAVISRARGRGLKVIA HHCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VTPDLIPQRVMDIIERYSS ECCCHHHHHHHHHHHHHCC >Mature Secondary Structure AIHATTRLRLYMLSTALLLAGAIIVDPTFLPPALLLLSLPVFSYIAIESNYKILKSIKV EEECHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCCEEHEEEC SGSVAMETGGRFFVEYTIINPTRIPILPVEFSIQYSELIKLVKGSKRGLLIIPPRAKVKL CCCEEEECCCEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEECCCCEEEE RFSFHGRLGEHFVGPLKIVLRDLFGFYRSSDEYLGKALVVNIPPTVEEVIVRKLLIYARS EEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHC TGLVKSRIPGEGVEFYDIRDYSPGDEAKRIVWRIYASRRMLAIWEPEKEVFQPVLFILDG CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCC TREMWSGPMSQSMIEHSARIISSIIYYLVKRGYPVSATVFNESLVHTSGKPMHGYHGYME CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCHHHHHH ALRVLSKVKFEEGDESHRRRALSGVLSYTYTRILPRDRSIIFLFTHLRDTIIDEIAAWNN HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHH LYKDKGHILYIVHPLITAYESDSDVPEWVANIYRVKLIENLREDMAVISRARGRGLKVIA HHCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE VTPDLIPQRVMDIIERYSS ECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA