Click here to switch to the map view.

The map label for this gene is 218883911

Identifier: 218883911

GI number: 218883911

Start: 562713

End: 563786

Strand: Direct

Name: 218883911

Synonym: DKAM_0600

Alternate gene names: NA

Gene position: 562713-563786 (Clockwise)

Preceding gene: 218883910

Following gene: 218883912

Centisome position: 41.22

GC content: 46.0

Gene sequence:

>1074_bases
ATGTCCAAGCATCCTCTTGACCTACCATTGAACAGGAAGCTCACACTCGATGAAATCATGGAGGCATTAAGACTATCCAT
AATAGCCGAGTTAGATGCGGTGAACCTATACCTTCAACTAGCTAGATCTATAGACGATGAAAAGGTGAGAAGAGTATTTG
AGGACATAGCTAACGAGGAAAAAACGCATATAGGCGAGTTCCTGGCTGTATTGGAGTCACTGGATCCCCAGCAGGTAGAG
GAGTTGAAGAGGGGGGCTGAGGAGGTCAGGGAGCTAACTGGTATAAGTAGCCCGCAGGGGCGAGGAGCTGGTGTGGGCAC
AAAGAATAGTGATGGATCAAACACCAGTGAAGACCCCCAGGGCATAGAATTAGTGGGCAAGATATTCCTCAACATAGTGA
ATGAGACCAGGTCTCTACGCAAGTACATACCCGTAGTAGATTTGGGGAAAGGTATTGAAAGCGTGGTCCTCGAGAAAACC
GGGGAGACCCTACAGCGTATAGTAGTACCTTTGAGAGAGCTATCAGTATACTTCAGAATCACTCAAAGAAGCCTTGAGTA
CTCATATAGAACCAAGACCAGTATCGATGCACCAGACATGTATCAGGCTGCGCTTAAACTAGCCACCATGGAGGATTCAC
TGATAATAGGATCCATTTTAGATTCCAATGATGTTTCAAGGAGTAAGCTTAGTGATTGGCGGACTGAGGATGCACCAGTT
ATTGATGTGGTAAACGCTGTTAACAAGCTTTACTCCGCCGGGGCTACCAGGCCATTTGTACTAGTGATCAACCCAGCTAA
CTATGTTAACATGGTTAAGTCAACCGGTAGAACAGGACTCACTGAGCTTGACAGGGTGAGGCAGGTAGTGGATCACATCG
TTGTCTCACCGGTAATAGGGGAGGATAAGGCCATAGTGTTATCTGCTAAGCCATATGTTATTGATGTGGTGACCGGTGGA
GATATCTCGGTGGATTATATTGGACCAGAGAAAGATATGCATGTATTCAGGGCATGGGAGCTGATAGCTTTAAGAATAAA
ACATGGTGAAGGCGTAATAGTACTTGAGAGGTAG

Upstream 100 bases:

>100_bases
CATGGATATTATTGAGAGGTATAGCTCGTAGAGTTAAATAATTTAACAATAAAGTATAAATATGATTCAACCAGTAATTA
TCCCATGGTAGATAACTATG

Downstream 100 bases:

>100_bases
GTATGAAATGGGCCAGGAACTGGTTACTAGGCTATTGGCCTACTCTAAAATAGAGGAGGAACATGCTAGAAAGCTAGTAG
AGCTGGGTGAGTCGCTTAAC

Product: Linocin_M18 bacteriocin protein

Products: NA

Alternate protein names: Rubrerythrin; Linocin; Methyltransferase; Linocin/CFP29-Like Protein

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MSKHPLDLPLNRKLTLDEIMEALRLSIIAELDAVNLYLQLARSIDDEKVRRVFEDIANEEKTHIGEFLAVLESLDPQQVE
ELKRGAEEVRELTGISSPQGRGAGVGTKNSDGSNTSEDPQGIELVGKIFLNIVNETRSLRKYIPVVDLGKGIESVVLEKT
GETLQRIVVPLRELSVYFRITQRSLEYSYRTKTSIDAPDMYQAALKLATMEDSLIIGSILDSNDVSRSKLSDWRTEDAPV
IDVVNAVNKLYSAGATRPFVLVINPANYVNMVKSTGRTGLTELDRVRQVVDHIVVSPVIGEDKAIVLSAKPYVIDVVTGG
DISVDYIGPEKDMHVFRAWELIALRIKHGEGVIVLER

Sequences:

>Translated_357_residues
MSKHPLDLPLNRKLTLDEIMEALRLSIIAELDAVNLYLQLARSIDDEKVRRVFEDIANEEKTHIGEFLAVLESLDPQQVE
ELKRGAEEVRELTGISSPQGRGAGVGTKNSDGSNTSEDPQGIELVGKIFLNIVNETRSLRKYIPVVDLGKGIESVVLEKT
GETLQRIVVPLRELSVYFRITQRSLEYSYRTKTSIDAPDMYQAALKLATMEDSLIIGSILDSNDVSRSKLSDWRTEDAPV
IDVVNAVNKLYSAGATRPFVLVINPANYVNMVKSTGRTGLTELDRVRQVVDHIVVSPVIGEDKAIVLSAKPYVIDVVTGG
DISVDYIGPEKDMHVFRAWELIALRIKHGEGVIVLER
>Mature_356_residues
SKHPLDLPLNRKLTLDEIMEALRLSIIAELDAVNLYLQLARSIDDEKVRRVFEDIANEEKTHIGEFLAVLESLDPQQVEE
LKRGAEEVRELTGISSPQGRGAGVGTKNSDGSNTSEDPQGIELVGKIFLNIVNETRSLRKYIPVVDLGKGIESVVLEKTG
ETLQRIVVPLRELSVYFRITQRSLEYSYRTKTSIDAPDMYQAALKLATMEDSLIIGSILDSNDVSRSKLSDWRTEDAPVI
DVVNAVNKLYSAGATRPFVLVINPANYVNMVKSTGRTGLTELDRVRQVVDHIVVSPVIGEDKAIVLSAKPYVIDVVTGGD
ISVDYIGPEKDMHVFRAWELIALRIKHGEGVIVLER

Specific function: Unknown

COG id: COG1633

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39646; Mature: 39515

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHPLDLPLNRKLTLDEIMEALRLSIIAELDAVNLYLQLARSIDDEKVRRVFEDIANEE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH
KTHIGEFLAVLESLDPQQVEELKRGAEEVRELTGISSPQGRGAGVGTKNSDGSNTSEDPQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
GIELVGKIFLNIVNETRSLRKYIPVVDLGKGIESVVLEKTGETLQRIVVPLRELSVYFRI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQRSLEYSYRTKTSIDAPDMYQAALKLATMEDSLIIGSILDSNDVSRSKLSDWRTEDAPV
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCH
IDVVNAVNKLYSAGATRPFVLVINPANYVNMVKSTGRTGLTELDRVRQVVDHIVVSPVIG
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
EDKAIVLSAKPYVIDVVTGGDISVDYIGPEKDMHVFRAWELIALRIKHGEGVIVLER
CCCEEEEECCCEEEEEEECCCEEEEEECCCCHHHHHHHHEEEEEEEECCCEEEEEEC
>Mature Secondary Structure 
SKHPLDLPLNRKLTLDEIMEALRLSIIAELDAVNLYLQLARSIDDEKVRRVFEDIANEE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCH
KTHIGEFLAVLESLDPQQVEELKRGAEEVRELTGISSPQGRGAGVGTKNSDGSNTSEDPQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
GIELVGKIFLNIVNETRSLRKYIPVVDLGKGIESVVLEKTGETLQRIVVPLRELSVYFRI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQRSLEYSYRTKTSIDAPDMYQAALKLATMEDSLIIGSILDSNDVSRSKLSDWRTEDAPV
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCH
IDVVNAVNKLYSAGATRPFVLVINPANYVNMVKSTGRTGLTELDRVRQVVDHIVVSPVIG
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
EDKAIVLSAKPYVIDVVTGGDISVDYIGPEKDMHVFRAWELIALRIKHGEGVIVLER
CCCEEEEECCCEEEEEEECCCEEEEEECCCCHHHHHHHHEEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA