Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883909

Identifier: 218883909

GI number: 218883909

Start: 559860

End: 561323

Strand: Direct

Name: 218883909

Synonym: DKAM_0598

Alternate gene names: NA

Gene position: 559860-561323 (Clockwise)

Preceding gene: 218883908

Following gene: 218883910

Centisome position: 41.01

GC content: 44.81

Gene sequence:

>1464_bases
ATGGTGCTAGCACTTGTCTTCATAGGTTTAATAGCCCTAGTTGAAAGAGGGCCAGTTGTCCCAGGGTTCCCAGTGGGTGC
ATCCCCATTTAACCCGTTATCTTTTGGTACACTGGGGTTAGTTAAGGATCTCGAGCATTACTACACTGTTAGAATAGCTA
GCTCCATGGAGGATCTCAATAGATTAACCGGTGGTAAATGTATTTATGTAGTGATATCGCCGGAGAAGCCTTTTGTAGCC
AGTGAAGCCGAGTACATAGTGAAATCACTCAGCGAGAGATGCAGGGAAGCAATAGTCTTCATCGGAGACGAATCAACTTA
TTCAAACGGGCTCTTGGAAGCGTTGAATACAAGTATCCGAGTTACCGGTAGCAGAATATACGTGAGCCAGTGTAGTGATA
TGGCATGCGGGTACTCGCCGTATCCACGTGCCCGGCTAATCCTTGGAAACAGGTCATTCAACCTAGTTCTAGATAAGGCA
TCAAATCTCATTGGTAGGGGAATTATACGGGGGTATATTACCGGGGGATGTGTTGTTACATTGCCTGGTGCAGGAGGCTT
CGAATGCAGTAGTATCGCGGTTGGAGCTAACGAGACCGTAGAGGCAGGAATCCATGACCCTGTTGTAGCATTAGAGGATC
ACGACTCACGTATACCGGTCTACGTGATAGGGGATGGCTCGATATTTCTTAACCAGGTGATTAACTCGGGGAATCAGAGC
GAGTACAAGGTGTTCGTGTTAGAGTTATTCCAGTATTTATGTGGAGGGGAGAGCGGGTGTATTATGGTATTTGACAACAT
GCACTATGAAACGATCAATGCATTCAACCTACTAGTGAATCCAGGCTTAATTACAGGGGCTGGAACTGGTTTAAGTGATA
TACTCTACGTATTCTCCCTTATACTTGCAACAATTATACATCCATCATTCTGGATGCCCCTGGTATTCAAATTTCTCGAT
GAATTATTCTCCACGCTTCTAGCCAACATGTTCCTAGCTATCCTCGTATTACTAGCAGTCACCATAGTTGTAGACAAGTA
CTTAACAAGGGGCATTGTTTTCAGGGGGGATGAAGTGTTAAGGGAGCAGGTTGAAAGAGATATTACAGTGTTTGAATCAG
TGAGGAGGAAGATAATTGAGAAGAAGGAGAAGCTGGGCAGGGATGACTTCCTAAACATCTATTGGCTAGCGAACCAGGTG
TTAACCATGATACTAGGGGTTGAACTATCCAGTCCAGCCTTCATTGAGAGAACATCACAATACGTGGGAAGTGATCTAGC
TAGCTCGTACTGGAGCTACATGAATAAGCTATATAGGAGAGCAGTAGGGGAGTCTTGGAGACCGCTTATAGTGAGGTGGC
ATAGTGAAGCACTTAAAGCCTATAGTGAAACCGAAAAAATGCTTTCACTCATTACATCAAGGCTTCAGATAGGGGATTAT
AGAAGGCTTCTAGCGGGGATCTAA

Upstream 100 bases:

>100_bases
TATATATTGAGGCTGGCGGCATATGTATACGCAACAGAGAGGAGGGGGGAGAGTGGAGAAAAAGAGGAGACAGGGGAGAG
GTAGTCTAGTAGCAACATCC

Downstream 100 bases:

>100_bases
ATGGCTATTCATGCTACAACAAGGCTGAGGCTCTACATGTTATCTACTGCCCTGCTTCTAGCTGGAGCCATAATAGTTGA
CCCAACTTTCCTGCCTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MVLALVFIGLIALVERGPVVPGFPVGASPFNPLSFGTLGLVKDLEHYYTVRIASSMEDLNRLTGGKCIYVVISPEKPFVA
SEAEYIVKSLSERCREAIVFIGDESTYSNGLLEALNTSIRVTGSRIYVSQCSDMACGYSPYPRARLILGNRSFNLVLDKA
SNLIGRGIIRGYITGGCVVTLPGAGGFECSSIAVGANETVEAGIHDPVVALEDHDSRIPVYVIGDGSIFLNQVINSGNQS
EYKVFVLELFQYLCGGESGCIMVFDNMHYETINAFNLLVNPGLITGAGTGLSDILYVFSLILATIIHPSFWMPLVFKFLD
ELFSTLLANMFLAILVLLAVTIVVDKYLTRGIVFRGDEVLREQVERDITVFESVRRKIIEKKEKLGRDDFLNIYWLANQV
LTMILGVELSSPAFIERTSQYVGSDLASSYWSYMNKLYRRAVGESWRPLIVRWHSEALKAYSETEKMLSLITSRLQIGDY
RRLLAGI

Sequences:

>Translated_487_residues
MVLALVFIGLIALVERGPVVPGFPVGASPFNPLSFGTLGLVKDLEHYYTVRIASSMEDLNRLTGGKCIYVVISPEKPFVA
SEAEYIVKSLSERCREAIVFIGDESTYSNGLLEALNTSIRVTGSRIYVSQCSDMACGYSPYPRARLILGNRSFNLVLDKA
SNLIGRGIIRGYITGGCVVTLPGAGGFECSSIAVGANETVEAGIHDPVVALEDHDSRIPVYVIGDGSIFLNQVINSGNQS
EYKVFVLELFQYLCGGESGCIMVFDNMHYETINAFNLLVNPGLITGAGTGLSDILYVFSLILATIIHPSFWMPLVFKFLD
ELFSTLLANMFLAILVLLAVTIVVDKYLTRGIVFRGDEVLREQVERDITVFESVRRKIIEKKEKLGRDDFLNIYWLANQV
LTMILGVELSSPAFIERTSQYVGSDLASSYWSYMNKLYRRAVGESWRPLIVRWHSEALKAYSETEKMLSLITSRLQIGDY
RRLLAGI
>Mature_487_residues
MVLALVFIGLIALVERGPVVPGFPVGASPFNPLSFGTLGLVKDLEHYYTVRIASSMEDLNRLTGGKCIYVVISPEKPFVA
SEAEYIVKSLSERCREAIVFIGDESTYSNGLLEALNTSIRVTGSRIYVSQCSDMACGYSPYPRARLILGNRSFNLVLDKA
SNLIGRGIIRGYITGGCVVTLPGAGGFECSSIAVGANETVEAGIHDPVVALEDHDSRIPVYVIGDGSIFLNQVINSGNQS
EYKVFVLELFQYLCGGESGCIMVFDNMHYETINAFNLLVNPGLITGAGTGLSDILYVFSLILATIIHPSFWMPLVFKFLD
ELFSTLLANMFLAILVLLAVTIVVDKYLTRGIVFRGDEVLREQVERDITVFESVRRKIIEKKEKLGRDDFLNIYWLANQV
LTMILGVELSSPAFIERTSQYVGSDLASSYWSYMNKLYRRAVGESWRPLIVRWHSEALKAYSETEKMLSLITSRLQIGDY
RRLLAGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53971; Mature: 53971

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLALVFIGLIALVERGPVVPGFPVGASPFNPLSFGTLGLVKDLEHYYTVRIASSMEDLN
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHH
RLTGGKCIYVVISPEKPFVASEAEYIVKSLSERCREAIVFIGDESTYSNGLLEALNTSIR
HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCCEE
VTGSRIYVSQCSDMACGYSPYPRARLILGNRSFNLVLDKASNLIGRGIIRGYITGGCVVT
EECCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHEECCCEEEE
LPGAGGFECSSIAVGANETVEAGIHDPVVALEDHDSRIPVYVIGDGSIFLNQVINSGNQS
ECCCCCCCCCCEEECCCCCHHCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCC
EYKVFVLELFQYLCGGESGCIMVFDNMHYETINAFNLLVNPGLITGAGTGLSDILYVFSL
HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHEEECCCEEECCCCCHHHHHHHHHH
ILATIIHPSFWMPLVFKFLDELFSTLLANMFLAILVLLAVTIVVDKYLTRGIVFRGDEVL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHH
REQVERDITVFESVRRKIIEKKEKLGRDDFLNIYWLANQVLTMILGVELSSPAFIERTSQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
YVGSDLASSYWSYMNKLYRRAVGESWRPLIVRWHSEALKAYSETEKMLSLITSRLQIGDY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLLAGI
HHHHHCC
>Mature Secondary Structure
MVLALVFIGLIALVERGPVVPGFPVGASPFNPLSFGTLGLVKDLEHYYTVRIASSMEDLN
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEHHHHHHHHHH
RLTGGKCIYVVISPEKPFVASEAEYIVKSLSERCREAIVFIGDESTYSNGLLEALNTSIR
HHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCCEE
VTGSRIYVSQCSDMACGYSPYPRARLILGNRSFNLVLDKASNLIGRGIIRGYITGGCVVT
EECCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHEECCCEEEE
LPGAGGFECSSIAVGANETVEAGIHDPVVALEDHDSRIPVYVIGDGSIFLNQVINSGNQS
ECCCCCCCCCCEEECCCCCHHCCCCCCEEEECCCCCCCCEEEEECCHHHHHHHHCCCCCC
EYKVFVLELFQYLCGGESGCIMVFDNMHYETINAFNLLVNPGLITGAGTGLSDILYVFSL
HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHEEECCCEEECCCCCHHHHHHHHHH
ILATIIHPSFWMPLVFKFLDELFSTLLANMFLAILVLLAVTIVVDKYLTRGIVFRGDEVL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHH
REQVERDITVFESVRRKIIEKKEKLGRDDFLNIYWLANQVLTMILGVELSSPAFIERTSQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
YVGSDLASSYWSYMNKLYRRAVGESWRPLIVRWHSEALKAYSETEKMLSLITSRLQIGDY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLLAGI
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA