| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883886
Identifier: 218883886
GI number: 218883886
Start: 538222
End: 539067
Strand: Direct
Name: 218883886
Synonym: DKAM_0575
Alternate gene names: NA
Gene position: 538222-539067 (Clockwise)
Preceding gene: 218883885
Following gene: 218883905
Centisome position: 39.42
GC content: 45.15
Gene sequence:
>846_bases ATGCCCGGTAAGCTAGCTCAATCACCTATGCCTAGATTAAGTGATATCCCTGCACTGACACGATACTTTACCGGGGTAGT GGCATTAATGGATCAGCATGATGCACCGTTAAACTATGTTGAATCACTAGCCAGCCACGGCCTGGAGGTCCTATACATAC CTACTAGGGATCAACATCCTGTTGAACTACTCGATCTCTTAAAGGCTACTTTCTTCATAGAGCACCATGTAAAAAACGGT GGAGCTGTTCTAGTACACTGTGTCAGCGGGCTCGGGAGGAGCAGTGTGGTTACGGCGTCATTCCTGGTCTTCAATGGTTT AACCGCATATGACGCAGTTATGGAGTTGAGGAGTATTATACCAGGGGCGCTTGAAAACCCTTGGCAGGTTAAAATGGTTA GGACATACGAGGTCTTCCTGAATAGCCTAAGTGAGCTGGGGTTACTTCGTAGTGTAGCCGACTGGATTAAAGTAGCTGAC TCCAGGATAACTAGGCATTTATCCAAGGCCATCCAGTTCCACATAGAACTACACGACCCTCTTCACATTAATACTCCCTG TATGAAGCAAGGATTAAGGCGGCTCATCACCGCGTACTTGTCTGGGAAGAATATACTGAGCCACATAGACGAGGAACTAT GCCTCCCAGAAACACTAGACTATGATTGCAGCGGTAGAGTGGTTACATTATACATAGATACCGTTGACAAACCAGTTGTT ACGCTATTATGTGATGACGATTGCAGTGTAATAACTAATAAAGCAATGGAGTGCAGGAAACATACGTTAGAACTCCTCGG AGGGGATATTGTTTTCAAGTGGGATTACTACTCCAATTATGTTTAG
Upstream 100 bases:
>100_bases GTGGGAAACATATCCCCGGGAATATATATTAATGGAGCCAGGATCACTGTGGAAAGATGGGATCAATTCAGGGGGTGGGG GAAACGTTTTCCAATGGGTG
Downstream 100 bases:
>100_bases CCAATCTTCTTGGGAAAGCTCAATCATTTCATAGTGGTTTCATTGATATGCCTAGGTTTCCCCAGCTCGCTCCACGGGTT CATGTGCGGCTGCCGAGCCC
Product: Dual specificity protein phosphatase
Products: NA
Alternate protein names: Protein-Tyrosine Phosphatase; Protein Tyrosine/Serine/Threonine Phosphatase
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MPGKLAQSPMPRLSDIPALTRYFTGVVALMDQHDAPLNYVESLASHGLEVLYIPTRDQHPVELLDLLKATFFIEHHVKNG GAVLVHCVSGLGRSSVVTASFLVFNGLTAYDAVMELRSIIPGALENPWQVKMVRTYEVFLNSLSELGLLRSVADWIKVAD SRITRHLSKAIQFHIELHDPLHINTPCMKQGLRRLITAYLSGKNILSHIDEELCLPETLDYDCSGRVVTLYIDTVDKPVV TLLCDDDCSVITNKAMECRKHTLELLGGDIVFKWDYYSNYV
Sequences:
>Translated_281_residues MPGKLAQSPMPRLSDIPALTRYFTGVVALMDQHDAPLNYVESLASHGLEVLYIPTRDQHPVELLDLLKATFFIEHHVKNG GAVLVHCVSGLGRSSVVTASFLVFNGLTAYDAVMELRSIIPGALENPWQVKMVRTYEVFLNSLSELGLLRSVADWIKVAD SRITRHLSKAIQFHIELHDPLHINTPCMKQGLRRLITAYLSGKNILSHIDEELCLPETLDYDCSGRVVTLYIDTVDKPVV TLLCDDDCSVITNKAMECRKHTLELLGGDIVFKWDYYSNYV >Mature_280_residues PGKLAQSPMPRLSDIPALTRYFTGVVALMDQHDAPLNYVESLASHGLEVLYIPTRDQHPVELLDLLKATFFIEHHVKNGG AVLVHCVSGLGRSSVVTASFLVFNGLTAYDAVMELRSIIPGALENPWQVKMVRTYEVFLNSLSELGLLRSVADWIKVADS RITRHLSKAIQFHIELHDPLHINTPCMKQGLRRLITAYLSGKNILSHIDEELCLPETLDYDCSGRVVTLYIDTVDKPVVT LLCDDDCSVITNKAMECRKHTLELLGGDIVFKWDYYSNYV
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31523; Mature: 31392
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGKLAQSPMPRLSDIPALTRYFTGVVALMDQHDAPLNYVESLASHGLEVLYIPTRDQHP CCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCH VELLDLLKATFFIEHHVKNGGAVLVHCVSGLGRSSVVTASFLVFNGLTAYDAVMELRSII HHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHC PGALENPWQVKMVRTYEVFLNSLSELGLLRSVADWIKVADSRITRHLSKAIQFHIELHDP CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC LHINTPCMKQGLRRLITAYLSGKNILSHIDEELCLPETLDYDCSGRVVTLYIDTVDKPVV EECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEE TLLCDDDCSVITNKAMECRKHTLELLGGDIVFKWDYYSNYV EEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC >Mature Secondary Structure PGKLAQSPMPRLSDIPALTRYFTGVVALMDQHDAPLNYVESLASHGLEVLYIPTRDQHP CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCCCH VELLDLLKATFFIEHHVKNGGAVLVHCVSGLGRSSVVTASFLVFNGLTAYDAVMELRSII HHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHC PGALENPWQVKMVRTYEVFLNSLSELGLLRSVADWIKVADSRITRHLSKAIQFHIELHDP CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC LHINTPCMKQGLRRLITAYLSGKNILSHIDEELCLPETLDYDCSGRVVTLYIDTVDKPVV EECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEE TLLCDDDCSVITNKAMECRKHTLELLGGDIVFKWDYYSNYV EEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA